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MS009688 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009688
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMembrane protein of ER body-like protein
Genome locationscaffold813:3266101..3266394
RNA-Seq ExpressionMS009688
SyntenyMS009688
Gene Ontology termsGO:0000041 - transition metal ion transport (biological process)
GO:0030026 - cellular manganese ion homeostasis (biological process)
GO:0098662 - inorganic cation transmembrane transport (biological process)
GO:0016020 - membrane (cellular component)
GO:0005384 - manganese ion transmembrane transporter activity (molecular function)
InterPro domainsIPR008217 - Ccc1 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152078.1 membrane protein of ER body 1-like [Momordica charantia]3.1e-2062.63Show/hide
Query:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQ-IVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV
        HY+FH+ VA +SFILFG V P VYAFT  +   K L LA  AG SL C ALLAALKAH+QKL+ Q ++SYI+T ASF+ FG  AF  SYLAG+LFGKL+
Subjt:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQ-IVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV

XP_022953308.1 uncharacterized protein LOC111455896 isoform X2 [Cucurbita moschata]4.7e-1352.04Show/hide
Query:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV
        +Y  H+V+A  SFILFG++ PLVY F+F  S+ K   LAA AGASLLC  LLA  KA++Q+  R  V Y++T AS++   A A   SYLAG L GKL+
Subjt:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV

XP_022953309.1 uncharacterized protein LOC111455896 isoform X3 [Cucurbita moschata]4.7e-1352.04Show/hide
Query:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV
        +Y  H+V+A  SFILFG++ PLVY F+F  S+ K   LAA AGASLLC  LLA  KA++Q+  R  V Y++T AS++   A A   SYLAG L GKL+
Subjt:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV

XP_022991679.1 uncharacterized protein LOC111488220 isoform X3 [Cucurbita maxima]4.7e-1352.04Show/hide
Query:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV
        +Y  H+V+A  SFILFG++ PLVY F+F  S+ K   LAA AGASLLC  LLA  KA++Q+  R  V Y++T AS++   A A   SYLAG L GKL+
Subjt:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV

XP_023548304.1 uncharacterized protein LOC111806979 isoform X3 [Cucurbita pepo subsp. pepo]4.7e-1352.04Show/hide
Query:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV
        +Y  H+V+A  SFILFG++ PLVY F+F  S+ K   LAA AGASLLC  LLA  KA++Q+  R  V Y++T AS++   A A   SYLAG L GKL+
Subjt:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV

TrEMBL top hitse value%identityAlignment
A0A6J1DDW9 membrane protein of ER body 1-like1.5e-2062.63Show/hide
Query:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQ-IVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV
        HY+FH+ VA +SFILFG V P VYAFT  +   K L LA  AG SL C ALLAALKAH+QKL+ Q ++SYI+T ASF+ FG  AF  SYLAG+LFGKL+
Subjt:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQ-IVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV

A0A6J1GMV7 uncharacterized protein LOC111455896 isoform X12.3e-1352.04Show/hide
Query:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV
        +Y  H+V+A  SFILFG++ PLVY F+F  S+ K   LAA AGASLLC  LLA  KA++Q+  R  V Y++T AS++   A A   SYLAG L GKL+
Subjt:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV

A0A6J1JMI1 uncharacterized protein LOC111488220 isoform X12.3e-1352.04Show/hide
Query:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV
        +Y  H+V+A  SFILFG++ PLVY F+F  S+ K   LAA AGASLLC  LLA  KA++Q+  R  V Y++T AS++   A A   SYLAG L GKL+
Subjt:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV

A0A6J1JVI5 uncharacterized protein LOC111488220 isoform X32.3e-1352.04Show/hide
Query:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV
        +Y  H+V+A  SFILFG++ PLVY F+F  S+ K   LAA AGASLLC  LLA  KA++Q+  R  V Y++T AS++   A A   SYLAG L GKL+
Subjt:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV

A0A6J1JWZ4 uncharacterized protein LOC111488220 isoform X22.3e-1352.04Show/hide
Query:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV
        +Y  H+V+A  SFILFG++ PLVY F+F  S+ K   LAA AGASLLC  LLA  KA++Q+  R  V Y++T AS++   A A   SYLAG L GKL+
Subjt:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV

SwissProt top hitse value%identityAlignment
F4KFS7 Membrane protein of ER body 22.2e-0531.96Show/hide
Query:  HYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVS---YIRTTASFVCFGAVAFFSSYLAGALFGKLV
        H +VA +S+I FG++ PLVYAF+F  +  K   L +    SL+C  LL ++K +V+K      S   Y+++ A +      +   SY+ G + G+ +
Subjt:  HYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVS---YIRTTASFVCFGAVAFFSSYLAGALFGKLV

Q8LPT3 Membrane protein of ER body-like protein2.2e-0534.69Show/hide
Query:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV
        ++  H  VA LSFI+ G++ P+VY F+F     K   +A+  GASL C  LLA  KAHV+  R    SY+++   +          SY+ G    +L+
Subjt:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV

Q8W4P8 Membrane protein of ER body 11.1e-0435.63Show/hide
Query:  HYVVATLSFILFGMVAPLVYAFTFPNSDKK--FLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYL
        H V+A  SF++FG++ PLVY F+F    +K     + A    SLLC  LL+  KA+V K R  + +  R T +       + F  YL
Subjt:  HYVVATLSFILFGMVAPLVYAFTFPNSDKK--FLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYL

Arabidopsis top hitse value%identityAlignment
AT4G27860.1 vacuolar iron transporter (VIT) family protein7.8e-0635.63Show/hide
Query:  HYVVATLSFILFGMVAPLVYAFTFPNSDKK--FLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYL
        H V+A  SF++FG++ PLVY F+F    +K     + A    SLLC  LL+  KA+V K R  + +  R T +       + F  YL
Subjt:  HYVVATLSFILFGMVAPLVYAFTFPNSDKK--FLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYL

AT4G27860.2 vacuolar iron transporter (VIT) family protein7.8e-0635.63Show/hide
Query:  HYVVATLSFILFGMVAPLVYAFTFPNSDKK--FLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYL
        H V+A  SF++FG++ PLVY F+F    +K     + A    SLLC  LL+  KA+V K R  + +  R T +       + F  YL
Subjt:  HYVVATLSFILFGMVAPLVYAFTFPNSDKK--FLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYL

AT4G27870.1 Vacuolar iron transporter (VIT) family protein1.6e-0634.69Show/hide
Query:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV
        ++  H  VA LSFI+ G++ P+VY F+F     K   +A+  GASL C  LLA  KAHV+  R    SY+++   +          SY+ G    +L+
Subjt:  HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV

AT5G24290.1 Vacuolar iron transporter (VIT) family protein1.6e-0631.96Show/hide
Query:  HYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVS---YIRTTASFVCFGAVAFFSSYLAGALFGKLV
        H +VA +S+I FG++ PLVYAF+F  +  K   L +    SL+C  LL ++K +V+K      S   Y+++ A +      +   SY+ G + G+ +
Subjt:  HYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVS---YIRTTASFVCFGAVAFFSSYLAGALFGKLV

AT5G24290.2 Vacuolar iron transporter (VIT) family protein1.6e-0631.96Show/hide
Query:  HYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVS---YIRTTASFVCFGAVAFFSSYLAGALFGKLV
        H +VA +S+I FG++ PLVYAF+F  +  K   L +    SL+C  LL ++K +V+K      S   Y+++ A +      +   SY+ G + G+ +
Subjt:  HYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVS---YIRTTASFVCFGAVAFFSSYLAGALFGKLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATTATAATTTCCATTACGTAGTGGCTACGCTATCATTCATATTGTTTGGTATGGTGGCTCCTTTGGTTTATGCCTTCACGTTCCCAAACTCTGATAAAAAATTCCTAAA
CCTTGCGGCCACTGCCGGAGCCTCCCTTTTATGCACTGCATTGCTTGCTGCTCTGAAAGCACACGTTCAGAAGCTCAGACGACAGATCGTCAGCTACATCAGAACTACAG
CCTCTTTCGTTTGCTTTGGAGCTGTGGCCTTCTTCTCGTCATACTTAGCAGGCGCGCTTTTTGGAAAACTTGTC
mRNA sequenceShow/hide mRNA sequence
CATTATAATTTCCATTACGTAGTGGCTACGCTATCATTCATATTGTTTGGTATGGTGGCTCCTTTGGTTTATGCCTTCACGTTCCCAAACTCTGATAAAAAATTCCTAAA
CCTTGCGGCCACTGCCGGAGCCTCCCTTTTATGCACTGCATTGCTTGCTGCTCTGAAAGCACACGTTCAGAAGCTCAGACGACAGATCGTCAGCTACATCAGAACTACAG
CCTCTTTCGTTTGCTTTGGAGCTGTGGCCTTCTTCTCGTCATACTTAGCAGGCGCGCTTTTTGGAAAACTTGTC
Protein sequenceShow/hide protein sequence
HYNFHYVVATLSFILFGMVAPLVYAFTFPNSDKKFLNLAATAGASLLCTALLAALKAHVQKLRRQIVSYIRTTASFVCFGAVAFFSSYLAGALFGKLV