; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS009690 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009690
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold813:3278898..3279353
RNA-Seq ExpressionMS009690
SyntenyMS009690
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143724.1 S-protein homolog 1-like [Momordica charantia]1.8e-3552.74Show/hide
Query:  MVVLLVSSALMVVGAQQLLPMVD-VEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDV
        +V+L V +AL V       P V+ + P    DK  W V+V NGLS+  LF HCKS+DTD+GE NL+ GA+IQW F+ N WGTTL+WCF++K   S S DV
Subjt:  MVVLLVSSALMVVGAQQLLPMVD-VEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDV

Query:  FWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENVDEVIHKW
        FW E    WL  RC     +CIW AKDDGIYIRN+ +N+DE++HKW
Subjt:  FWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENVDEVIHKW

XP_022148919.1 S-protein homolog 1-like [Momordica charantia]5.4e-4051.33Show/hide
Query:  MVVLLVSSALMVVGAQQLLPMVDVEPKS---RDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSL
        MV+LLV ++L+VV  QQ++  +    K+   ++    W ++V NGLS + LF+HCKSKD D+G  NL  G +IQW F  N WGTTL+WCF+RK   + S 
Subjt:  MVVLLVSSALMVVGAQQLLPMVDVEPKS---RDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSL

Query:  DVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENVDEVIHKWNE
        DVFWVE + +WL  RCA   ++CIWIAKDDGIY+RN S+++DE+IHKW +
Subjt:  DVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENVDEVIHKWNE

XP_022155209.1 S-protein homolog 1-like [Momordica charantia]9.8e-82100Show/hide
Query:  MVVLLVSSALMVVGAQQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVF
        MVVLLVSSALMVVGAQQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVF
Subjt:  MVVLLVSSALMVVGAQQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVF

Query:  WVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENVDEVIHKWNE
        WVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENVDEVIHKWNE
Subjt:  WVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENVDEVIHKWNE

XP_022155227.1 S-protein homolog 74-like [Momordica charantia]3.1e-4357.62Show/hide
Query:  MVVLLVSSALMVVGA---QQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSL
        ++VLLV SAL+V  A   +QL P+V+V+       R + ++VANGLS +I ++ CKSKDT+IG   LDLGA I W F+ NFWGTTL+WCF  K     S 
Subjt:  MVVLLVSSALMVVGA---QQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSL

Query:  DVFWVERKTSWLRPRC-APQTMSCIWIAKDDGIYIRNLSENVDEVIHKWNE
        DVFWVE+++SWLR RC   +T++CIWI KDDGIYIRNL++NVDE+IHKWNE
Subjt:  DVFWVERKTSWLRPRC-APQTMSCIWIAKDDGIYIRNLSENVDEVIHKWNE

XP_022155249.1 S-protein homolog 1-like [Momordica charantia]4.6e-3957.33Show/hide
Query:  MVVLLVSSALMV--VGAQQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLD
        M+VLLV SAL+V   G  QL P+VDV  K R    V+ +++ NGL  EI+F+ CKSKDT+IG+  LDLGA+I W F+ N WGTTLYWC+  K    VS D
Subjt:  MVVLLVSSALMV--VGAQQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLD

Query:  VFWVERKTSWLRPRCAPQ-TMSCIWIAKDDGIYIRNLSENVDEVIHKWNE
        VFW E KT WL  RC  +  ++ IWIAK+DGIY+RNL++NVDE+IHKWNE
Subjt:  VFWVERKTSWLRPRCAPQ-TMSCIWIAKDDGIYIRNLSENVDEVIHKWNE

TrEMBL top hitse value%identityAlignment
A0A6J1CQ65 S-protein homolog8.7e-3652.74Show/hide
Query:  MVVLLVSSALMVVGAQQLLPMVD-VEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDV
        +V+L V +AL V       P V+ + P    DK  W V+V NGLS+  LF HCKS+DTD+GE NL+ GA+IQW F+ N WGTTL+WCF++K   S S DV
Subjt:  MVVLLVSSALMVVGAQQLLPMVD-VEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDV

Query:  FWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENVDEVIHKW
        FW E    WL  RC     +CIW AKDDGIYIRN+ +N+DE++HKW
Subjt:  FWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENVDEVIHKW

A0A6J1D5G6 S-protein homolog2.6e-4051.33Show/hide
Query:  MVVLLVSSALMVVGAQQLLPMVDVEPKS---RDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSL
        MV+LLV ++L+VV  QQ++  +    K+   ++    W ++V NGLS + LF+HCKSKD D+G  NL  G +IQW F  N WGTTL+WCF+RK   + S 
Subjt:  MVVLLVSSALMVVGAQQLLPMVDVEPKS---RDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSL

Query:  DVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENVDEVIHKWNE
        DVFWVE + +WL  RCA   ++CIWIAKDDGIY+RN S+++DE+IHKW +
Subjt:  DVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENVDEVIHKWNE

A0A6J1DNS4 S-protein homolog1.5e-4357.62Show/hide
Query:  MVVLLVSSALMVVGA---QQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSL
        ++VLLV SAL+V  A   +QL P+V+V+       R + ++VANGLS +I ++ CKSKDT+IG   LDLGA I W F+ NFWGTTL+WCF  K     S 
Subjt:  MVVLLVSSALMVVGA---QQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSL

Query:  DVFWVERKTSWLRPRC-APQTMSCIWIAKDDGIYIRNLSENVDEVIHKWNE
        DVFWVE+++SWLR RC   +T++CIWI KDDGIYIRNL++NVDE+IHKWNE
Subjt:  DVFWVERKTSWLRPRC-APQTMSCIWIAKDDGIYIRNLSENVDEVIHKWNE

A0A6J1DPK8 S-protein homolog4.7e-82100Show/hide
Query:  MVVLLVSSALMVVGAQQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVF
        MVVLLVSSALMVVGAQQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVF
Subjt:  MVVLLVSSALMVVGAQQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVF

Query:  WVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENVDEVIHKWNE
        WVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENVDEVIHKWNE
Subjt:  WVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENVDEVIHKWNE

A0A6J1DPP7 S-protein homolog2.2e-3957.33Show/hide
Query:  MVVLLVSSALMV--VGAQQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLD
        M+VLLV SAL+V   G  QL P+VDV  K R    V+ +++ NGL  EI+F+ CKSKDT+IG+  LDLGA+I W F+ N WGTTLYWC+  K    VS D
Subjt:  MVVLLVSSALMV--VGAQQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLD

Query:  VFWVERKTSWLRPRCAPQ-TMSCIWIAKDDGIYIRNLSENVDEVIHKWNE
        VFW E KT WL  RC  +  ++ IWIAK+DGIY+RNL++NVDE+IHKWNE
Subjt:  VFWVERKTSWLRPRCAPQ-TMSCIWIAKDDGIYIRNLSENVDEVIHKWNE

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 61.0e-0934.23Show/hide
Query:  RVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWC-FMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNL
        RV + N  +  +L +HCKS+D D G   L  G    W F VNF  +TLY+C F ++       D++   R +S    RC     +C W AK+DGIY    
Subjt:  RVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWC-FMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNL

Query:  SENVDEVIHKW
            + + +KW
Subjt:  SENVDEVIHKW

F4JLS0 S-protein homolog 11.4e-1940.18Show/hide
Query:  WRVYVANGLSS-EILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRN
        W+V V NGL++ E LF+HCKSK+ D+GE NL    +  W F  N   +T +WC+M K +  ++++VFW +     L  RC     +CIW AK DG+Y+ N
Subjt:  WRVYVANGLSS-EILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRN

Query:  LSENVDEVIHKW
         +   D +  KW
Subjt:  LSENVDEVIHKW

Q2HQ46 S-protein homolog 742.5e-1940.18Show/hide
Query:  WRVYVANGLSS-EILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRN
        W+V VANGL++ E LF+HCKSK+ D+G+ NL    +  W F  N   +TL+WC+M K    +++ VFW +     L  RC     +C+W AK+DG+Y+ N
Subjt:  WRVYVANGLSS-EILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRN

Query:  LSENVDEVIHKW
         +   D +  KW
Subjt:  LSENVDEVIHKW

Q9FI84 S-protein homolog 273.0e-0936.54Show/hide
Query:  RVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIY-IRNL
        R+ V N  +  +L +HCKSKD D+G      G    WKF VNF  +TLY+C   +G D+    VF ++R       R   +  +C W AK D +Y   NL
Subjt:  RVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIY-IRNL

Query:  SENV
         + V
Subjt:  SENV

Q9LW22 S-protein homolog 211.4e-1137.78Show/hide
Query:  NGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIY
        N  +  IL +HCKSK+ DIG + L +G  + + F+ NFWGTT +WC + KG D          +         A    S  W+A+DDGIY
Subjt:  NGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIY

Arabidopsis top hitse value%identityAlignment
AT3G26880.1 Plant self-incompatibility protein S1 family1.0e-1237.78Show/hide
Query:  NGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIY
        N  +  IL +HCKSK+ DIG + L +G  + + F+ NFWGTT +WC + KG D          +         A    S  W+A+DDGIY
Subjt:  NGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIY

AT4G16295.1 S-protein homologue 11.0e-2040.18Show/hide
Query:  WRVYVANGLSS-EILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRN
        W+V V NGL++ E LF+HCKSK+ D+GE NL    +  W F  N   +T +WC+M K +  ++++VFW +     L  RC     +CIW AK DG+Y+ N
Subjt:  WRVYVANGLSS-EILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRN

Query:  LSENVDEVIHKW
         +   D +  KW
Subjt:  LSENVDEVIHKW

AT4G29035.1 Plant self-incompatibility protein S1 family1.7e-2040.18Show/hide
Query:  WRVYVANGLSS-EILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRN
        W+V VANGL++ E LF+HCKSK+ D+G+ NL    +  W F  N   +TL+WC+M K    +++ VFW +     L  RC     +C+W AK+DG+Y+ N
Subjt:  WRVYVANGLSS-EILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRN

Query:  LSENVDEVIHKW
         +   D +  KW
Subjt:  LSENVDEVIHKW

AT5G04347.1 Plant self-incompatibility protein S1 family1.1e-1131.78Show/hide
Query:  VANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENV
        V N L++++L + C+SKD ++G+  L +G   +  F  N W  TL+WC + KG D   L V +   ++ W +    P+    +WIA++DGIY     E  
Subjt:  VANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENV

Query:  DEVIHKW
         +  + W
Subjt:  DEVIHKW

AT5G04350.1 Plant self-incompatibility protein S1 family8.7e-1237.5Show/hide
Query:  RVYVANGLS-SEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIY
        +V ++N L  S++L +HC+SKD D+GE  L +G   ++ F  N W TT + C M +G  +    + +V  +TSW +   A    SC WI ++DGIY
Subjt:  RVYVANGLS-SEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTGGCAGATGGCAAATGGTTGTGTTGCTTGTCTCGTCGGCTCTGATGGTGGTGGGGGCACAGCAATTACTGCCAATGGTGGACGTGGAGCCAAAAAGTAGAGATGACAA
ACGTGTGTGGCGCGTTTATGTGGCCAATGGGTTGAGCAGTGAGATTCTATTTCTGCACTGCAAGTCCAAAGACACTGACATTGGGGAGCGCAACTTGGACCTTGGAGCTC
AAATCCAGTGGAAATTTCAAGTCAACTTTTGGGGGACGACGTTGTATTGGTGTTTCATGCGAAAGGGTAGCGACTCGGTCTCGTTAGATGTCTTCTGGGTTGAACGTAAG
ACCTCGTGGCTCCGCCCGAGGTGCGCTCCTCAAACAATGAGTTGTATTTGGATAGCCAAAGATGACGGAATTTACATAAGAAACCTTTCTGAAAATGTGGATGAGGTGAT
TCATAAATGGAACGAG
mRNA sequenceShow/hide mRNA sequence
CTTGGCAGATGGCAAATGGTTGTGTTGCTTGTCTCGTCGGCTCTGATGGTGGTGGGGGCACAGCAATTACTGCCAATGGTGGACGTGGAGCCAAAAAGTAGAGATGACAA
ACGTGTGTGGCGCGTTTATGTGGCCAATGGGTTGAGCAGTGAGATTCTATTTCTGCACTGCAAGTCCAAAGACACTGACATTGGGGAGCGCAACTTGGACCTTGGAGCTC
AAATCCAGTGGAAATTTCAAGTCAACTTTTGGGGGACGACGTTGTATTGGTGTTTCATGCGAAAGGGTAGCGACTCGGTCTCGTTAGATGTCTTCTGGGTTGAACGTAAG
ACCTCGTGGCTCCGCCCGAGGTGCGCTCCTCAAACAATGAGTTGTATTTGGATAGCCAAAGATGACGGAATTTACATAAGAAACCTTTCTGAAAATGTGGATGAGGTGAT
TCATAAATGGAACGAG
Protein sequenceShow/hide protein sequence
LGRWQMVVLLVSSALMVVGAQQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERK
TSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENVDEVIHKWNE