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MS009691 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009691
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold813:3281191..3281652
RNA-Seq ExpressionMS009691
SyntenyMS009691
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143724.1 S-protein homolog 1-like [Momordica charantia]2.2e-3349.67Show/hide
Query:  GRHVIVLLVWSALVVAAAADQKQLYPVVEVQHVDHSSTRFLIHVANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKA
        G +V++L V +AL VA         P VE         ++ +HV NGLS    +  CKS+DT++G H L+ GA I W F+ N WGTTLFWCF  K G  A
Subjt:  GRHVIVLLVWSALVVAAAADQKQLYPVVEVQHVDHSSTRFLIHVANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKA

Query:  SFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKW
        SFDVFW E    WL  RC  D   TCIW  KDDGIYIRN+  N+DEL+HKW
Subjt:  SFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKW

XP_022148919.1 S-protein homolog 1-like [Momordica charantia]1.1e-3752.87Show/hide
Query:  TGRHVIVLLVWSALVVAAAADQK---QLYPVVEVQHVDHSSTRFLIHVANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKS
        T RH+++LLV ++L+V   ADQ+   Q+   ++   V +  T + IHV NGLS D  +V CKSKD ++G H L  G  I W F+ N WGTTLFWCF  K 
Subjt:  TGRHVIVLLVWSALVVAAAADQK---QLYPVVEVQHVDHSSTRFLIHVANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKS

Query:  GAKASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKWNE
        GA ASFDVFWVE R +WL  RC     LTCIWI KDDGIY+RN + ++DELIHKW +
Subjt:  GAKASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKWNE

XP_022155209.1 S-protein homolog 1-like [Momordica charantia]2.6e-4257.62Show/hide
Query:  VIVLLVWSALVVAAAADQKQLYPVVEVQHVDHSSTR-FLIHVANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKASF
        ++VLLV SAL+V  A   +QL P+V+V+       R + ++VANGLS +I ++ CKSKDT+IG   LDLGA I W F+ NFWGTTL+WCF  K     S 
Subjt:  VIVLLVWSALVVAAAADQKQLYPVVEVQHVDHSSTR-FLIHVANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKASF

Query:  DVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKWNE
        DVFWVE+++SWLR RC   +T++CIWI KDDGIYIRNL++NVDE+IHKWNE
Subjt:  DVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKWNE

XP_022155227.1 S-protein homolog 74-like [Momordica charantia]1.6e-87100Show/hide
Query:  TGRHVIVLLVWSALVVAAAADQKQLYPVVEVQHVDHSSTRFLIHVANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAK
        TGRHVIVLLVWSALVVAAAADQKQLYPVVEVQHVDHSSTRFLIHVANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAK
Subjt:  TGRHVIVLLVWSALVVAAAADQKQLYPVVEVQHVDHSSTRFLIHVANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAK

Query:  ASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKWNE
        ASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKWNE
Subjt:  ASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKWNE

XP_022155249.1 S-protein homolog 1-like [Momordica charantia]4.3e-5368.83Show/hide
Query:  TGRHVIVLLVWSALVVAAAADQKQLYPVVEVQHVDHSSTRFLIHVANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAK
        TGRH+IVLLVWSALVVAAA  Q QL PVV+V      S  F +H+ NGL  +I +V CKSKDTNIG HFLDLGA I WHFE N WGTTL+WC+A+K+GAK
Subjt:  TGRHVIVLLVWSALVVAAAADQKQLYPVVEVQHVDHSSTRFLIHVANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAK

Query:  ASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKWNE
         SFDVFW EK + WL ERCGG   L  IWI K+DGIY+RNLT+NVDELIHKWNE
Subjt:  ASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKWNE

TrEMBL top hitse value%identityAlignment
A0A6J1CQ65 S-protein homolog1.1e-3349.67Show/hide
Query:  GRHVIVLLVWSALVVAAAADQKQLYPVVEVQHVDHSSTRFLIHVANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKA
        G +V++L V +AL VA         P VE         ++ +HV NGLS    +  CKS+DT++G H L+ GA I W F+ N WGTTLFWCF  K G  A
Subjt:  GRHVIVLLVWSALVVAAAADQKQLYPVVEVQHVDHSSTRFLIHVANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKA

Query:  SFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKW
        SFDVFW E    WL  RC  D   TCIW  KDDGIYIRN+  N+DEL+HKW
Subjt:  SFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKW

A0A6J1D5G6 S-protein homolog5.5e-3852.87Show/hide
Query:  TGRHVIVLLVWSALVVAAAADQK---QLYPVVEVQHVDHSSTRFLIHVANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKS
        T RH+++LLV ++L+V   ADQ+   Q+   ++   V +  T + IHV NGLS D  +V CKSKD ++G H L  G  I W F+ N WGTTLFWCF  K 
Subjt:  TGRHVIVLLVWSALVVAAAADQK---QLYPVVEVQHVDHSSTRFLIHVANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKS

Query:  GAKASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKWNE
        GA ASFDVFWVE R +WL  RC     LTCIWI KDDGIY+RN + ++DELIHKW +
Subjt:  GAKASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKWNE

A0A6J1DNS4 S-protein homolog7.6e-88100Show/hide
Query:  TGRHVIVLLVWSALVVAAAADQKQLYPVVEVQHVDHSSTRFLIHVANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAK
        TGRHVIVLLVWSALVVAAAADQKQLYPVVEVQHVDHSSTRFLIHVANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAK
Subjt:  TGRHVIVLLVWSALVVAAAADQKQLYPVVEVQHVDHSSTRFLIHVANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAK

Query:  ASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKWNE
        ASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKWNE
Subjt:  ASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKWNE

A0A6J1DPK8 S-protein homolog1.3e-4257.62Show/hide
Query:  VIVLLVWSALVVAAAADQKQLYPVVEVQHVDHSSTR-FLIHVANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKASF
        ++VLLV SAL+V  A   +QL P+V+V+       R + ++VANGLS +I ++ CKSKDT+IG   LDLGA I W F+ NFWGTTL+WCF  K     S 
Subjt:  VIVLLVWSALVVAAAADQKQLYPVVEVQHVDHSSTR-FLIHVANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKASF

Query:  DVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKWNE
        DVFWVE+++SWLR RC   +T++CIWI KDDGIYIRNL++NVDE+IHKWNE
Subjt:  DVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKWNE

A0A6J1DPP7 S-protein homolog2.1e-5368.83Show/hide
Query:  TGRHVIVLLVWSALVVAAAADQKQLYPVVEVQHVDHSSTRFLIHVANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAK
        TGRH+IVLLVWSALVVAAA  Q QL PVV+V      S  F +H+ NGL  +I +V CKSKDTNIG HFLDLGA I WHFE N WGTTL+WC+A+K+GAK
Subjt:  TGRHVIVLLVWSALVVAAAADQKQLYPVVEVQHVDHSSTRFLIHVANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAK

Query:  ASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKWNE
         SFDVFW EK + WL ERCGG   L  IWI K+DGIY+RNLT+NVDELIHKWNE
Subjt:  ASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKWNE

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 63.0e-0935.71Show/hide
Query:  VSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWC-FASKSGAKASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKW
        V CKS+D + G H L  G   GW F  NF  +TL++C F+ +   K  FD++   + SS    RC       C W  K+DGIY        + L +KW
Subjt:  VSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWC-FASKSGAKASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKW

F4JLS0 S-protein homolog 14.5e-1334.23Show/hide
Query:  IHVANGL-SGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNL
        + V NGL +G+  ++ CKSK+ ++G   L       W+F  N   +T FWC+ +K     + +VFW +     L  RCG      CIW  K DG+Y+ N 
Subjt:  IHVANGL-SGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNL

Query:  TQNVDELIHKW
            D L  KW
Subjt:  TQNVDELIHKW

P0DN92 S-protein homolog 249.2e-0633.73Show/hide
Query:  VSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWC-FASKSGAKASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIY
        + CKS+D ++G H L  G   GW F  NF  +TL++C F+     K  F+++    R++    RC       C W  + DGIY
Subjt:  VSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWC-FASKSGAKASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIY

Q2HQ46 S-protein homolog 743.5e-1335.14Show/hide
Query:  IHVANGL-SGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNL
        + VANGL +G+  ++ CKSK+ ++G   L       W+F  N   +TLFWC+ SK     +  VFW +     L  RC   +   C+W  K+DG+Y+ N 
Subjt:  IHVANGL-SGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNL

Query:  TQNVDELIHKW
            D L  KW
Subjt:  TQNVDELIHKW

Q9LW22 S-protein homolog 212.4e-0632.26Show/hide
Query:  NGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKASFDVFWVEKRSSWLRERCG--GDETLTCIWIVKDDGIY
        N  + +I  V CKSK+ +IG  +L +G  + + F+ NFWGTT FWC   K      +       R     +  G    +  +  W+ +DDGIY
Subjt:  NGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKASFDVFWVEKRSSWLRERCG--GDETLTCIWIVKDDGIY

Arabidopsis top hitse value%identityAlignment
AT1G28305.1 Plant self-incompatibility protein S1 family5.9e-0830.69Show/hide
Query:  YVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWC---FASKSGAKASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHK
        +V CKS   ++G H++  G    +    NFW TTLFWC             FDV+           + G  +  T  W  ++DGIY R L Q     +H 
Subjt:  YVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWC---FASKSGAKASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHK

Query:  W
        W
Subjt:  W

AT3G26880.1 Plant self-incompatibility protein S1 family1.7e-0732.26Show/hide
Query:  NGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKASFDVFWVEKRSSWLRERCG--GDETLTCIWIVKDDGIY
        N  + +I  V CKSK+ +IG  +L +G  + + F+ NFWGTT FWC   K      +       R     +  G    +  +  W+ +DDGIY
Subjt:  NGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKASFDVFWVEKRSSWLRERCG--GDETLTCIWIVKDDGIY

AT4G16295.1 S-protein homologue 13.2e-1434.23Show/hide
Query:  IHVANGL-SGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNL
        + V NGL +G+  ++ CKSK+ ++G   L       W+F  N   +T FWC+ +K     + +VFW +     L  RCG      CIW  K DG+Y+ N 
Subjt:  IHVANGL-SGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNL

Query:  TQNVDELIHKW
            D L  KW
Subjt:  TQNVDELIHKW

AT4G29035.1 Plant self-incompatibility protein S1 family2.5e-1435.14Show/hide
Query:  IHVANGL-SGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNL
        + VANGL +G+  ++ CKSK+ ++G   L       W+F  N   +TLFWC+ SK     +  VFW +     L  RC   +   C+W  K+DG+Y+ N 
Subjt:  IHVANGL-SGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNL

Query:  TQNVDELIHKW
            D L  KW
Subjt:  TQNVDELIHKW

AT5G04347.1 Plant self-incompatibility protein S1 family4.8e-1032.41Show/hide
Query:  VANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQN
        V N L+  +  V C+SKD N+G H L +G     +F+ N W  TLFWC   K G      V +   RS W       D     +WI ++DGIY     + 
Subjt:  VANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKASFDVFWVEKRSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQN

Query:  VDELIHKW
          +  + W
Subjt:  VDELIHKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACAGGAAGGCATGTGATTGTGTTGCTTGTCTGGTCGGCTCTGGTGGTGGCGGCGGCGGCGGATCAAAAGCAATTATATCCGGTGGTGGAGGTGCAACACGTGGACCATTC
TTCTACCAGATTCCTGATTCATGTGGCGAATGGGCTGAGCGGTGATATTTGCTATGTGAGCTGCAAGTCCAAAGACACTAATATTGGGGGCCACTTCTTAGACCTTGGAG
CTAATATCGGATGGCACTTTGAGCCAAACTTTTGGGGTACGACACTGTTTTGGTGCTTCGCTTCAAAGTCGGGGGCCAAAGCGTCGTTTGATGTCTTTTGGGTTGAAAAA
CGTAGTTCATGGCTCCGAGAAAGGTGCGGTGGCGATGAGACATTAACTTGTATTTGGATAGTCAAAGATGACGGAATTTACATTAGAAATCTTACTCAAAATGTTGATGA
GTTGATTCATAAGTGGAATGAG
mRNA sequenceShow/hide mRNA sequence
ACAGGAAGGCATGTGATTGTGTTGCTTGTCTGGTCGGCTCTGGTGGTGGCGGCGGCGGCGGATCAAAAGCAATTATATCCGGTGGTGGAGGTGCAACACGTGGACCATTC
TTCTACCAGATTCCTGATTCATGTGGCGAATGGGCTGAGCGGTGATATTTGCTATGTGAGCTGCAAGTCCAAAGACACTAATATTGGGGGCCACTTCTTAGACCTTGGAG
CTAATATCGGATGGCACTTTGAGCCAAACTTTTGGGGTACGACACTGTTTTGGTGCTTCGCTTCAAAGTCGGGGGCCAAAGCGTCGTTTGATGTCTTTTGGGTTGAAAAA
CGTAGTTCATGGCTCCGAGAAAGGTGCGGTGGCGATGAGACATTAACTTGTATTTGGATAGTCAAAGATGACGGAATTTACATTAGAAATCTTACTCAAAATGTTGATGA
GTTGATTCATAAGTGGAATGAG
Protein sequenceShow/hide protein sequence
TGRHVIVLLVWSALVVAAAADQKQLYPVVEVQHVDHSSTRFLIHVANGLSGDICYVSCKSKDTNIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKASFDVFWVEK
RSSWLRERCGGDETLTCIWIVKDDGIYIRNLTQNVDELIHKWNE