CuGenDBv2

Gene ID	MS009692
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	S-protein homolog
Genome location	scaffold813:3282827..3283145
RNA-Seq Expression	MS009692
Synteny	MS009692
Gene Ontology terms	GO:0060320 - rejection of self pollen (biological process) GO:0005576 - extracellular region (cellular component)
InterPro domains	IPR010264 - Plant self-incompatibility S1

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022143724.1 S-protein homolog 1-like [Momordica charantia]

1.9e-28

54.46

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Query:  WHIPMVNGL-NQIFFVSCKSKDTDIG-HFLDLGAEIVWHFEPNTWGTTLYWCYAK-----VSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIYLRN
        WH+ +VNGL N   F  CKS+DTD+G H L+ GAEI W F+ N WGTTL+WC+ K      SFDVFW E  H WL  RC   G  + IW  KDD IY+RN
Subjt:  WHIPMVNGL-NQIFFVSCKSKDTDIG-HFLDLGAEIVWHFEPNTWGTTLYWCYAK-----VSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIYLRN

Query:  LAPNVDELIHKW
        +  N+DEL+HKW
Subjt:  LAPNVDELIHKW

XP_022148919.1 S-protein homolog 1-like [Momordica charantia]

3.0e-29

56.25

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Query:  WHIPMVNGLNQ-IFFVSCKSKDTDIG-HFLDLGAEIVWHFEPNTWGTTLYWCY-----AKVSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIYLRN
        WHI +VNGL++   FV CKSKD D+G H L  G EI W F+ N WGTTL+WC+     A  SFDVFW ES+H+WL  RC    + + IWI KDD IYLRN
Subjt:  WHIPMVNGLNQ-IFFVSCKSKDTDIG-HFLDLGAEIVWHFEPNTWGTTLYWCY-----AKVSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIYLRN

Query:  LAPNVDELIHKW
         + ++DELIHKW
Subjt:  LAPNVDELIHKW

XP_022155209.1 S-protein homolog 1-like [Momordica charantia]

8.6e-29

57.14

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Query:  WHIPMVNGL-NQIFFVSCKSKDTDIG-HFLDLGAEIVWHFEPNTWGTTLYWCYAK-----VSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIYLRN
        W + + NGL ++I F+ CKSKDTDIG   LDLGA+I W F+ N WGTTLYWC+ +     VS DVFW E K  WL  RC      S IWI KDD IY+RN
Subjt:  WHIPMVNGL-NQIFFVSCKSKDTDIG-HFLDLGAEIVWHFEPNTWGTTLYWCYAK-----VSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIYLRN

Query:  LAPNVDELIHKW
        L+ NVDE+IHKW
Subjt:  LAPNVDELIHKW

XP_022155227.1 S-protein homolog 74-like [Momordica charantia]

2.1e-35

66.36

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Query:  IPMVNGLN-QIFFVSCKSKDTDI-GHFLDLGAEIVWHFEPNTWGTTLYWCY-----AKVSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIYLRNLA
        I + NGL+  I +VSCKSKDT+I GHFLDLGA I WHFEPN WGTTL+WC+     AK SFDVFW E +  WL ERCGG    + IWIVKDD IY+RNL 
Subjt:  IPMVNGLN-QIFFVSCKSKDTDI-GHFLDLGAEIVWHFEPNTWGTTLYWCY-----AKVSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIYLRNLA

Query:  PNVDELIHKW
         NVDELIHKW
Subjt:  PNVDELIHKW

XP_022155249.1 S-protein homolog 1-like [Momordica charantia]

4.0e-42

74.77

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Query:  WHIPMVNGLNQIFFVSCKSKDTDIG-HFLDLGAEIVWHFEPNTWGTTLYWCY-----AKVSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIYLRNL
        +H+ MVNGL++I FV CKSKDT+IG HFLDLGAEIVWHFE N WGTTLYWCY     AKVSFDVFW+E K  WLGERCGG GV +LIWI K+D IYLRNL
Subjt:  WHIPMVNGLNQIFFVSCKSKDTDIG-HFLDLGAEIVWHFEPNTWGTTLYWCY-----AKVSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIYLRNL

Query:  APNVDELIHKW
          NVDELIHKW
Subjt:  APNVDELIHKW

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CQ65 S-protein homolog

9.3e-29

54.46

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Query:  WHIPMVNGL-NQIFFVSCKSKDTDIG-HFLDLGAEIVWHFEPNTWGTTLYWCYAK-----VSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIYLRN
        WH+ +VNGL N   F  CKS+DTD+G H L+ GAEI W F+ N WGTTL+WC+ K      SFDVFW E  H WL  RC   G  + IW  KDD IY+RN
Subjt:  WHIPMVNGL-NQIFFVSCKSKDTDIG-HFLDLGAEIVWHFEPNTWGTTLYWCYAK-----VSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIYLRN

Query:  LAPNVDELIHKW
        +  N+DEL+HKW
Subjt:  LAPNVDELIHKW

A0A6J1D5G6 S-protein homolog

1.4e-29

56.25

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Query:  WHIPMVNGLNQ-IFFVSCKSKDTDIG-HFLDLGAEIVWHFEPNTWGTTLYWCY-----AKVSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIYLRN
        WHI +VNGL++   FV CKSKD D+G H L  G EI W F+ N WGTTL+WC+     A  SFDVFW ES+H+WL  RC    + + IWI KDD IYLRN
Subjt:  WHIPMVNGLNQ-IFFVSCKSKDTDIG-HFLDLGAEIVWHFEPNTWGTTLYWCY-----AKVSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIYLRN

Query:  LAPNVDELIHKW
         + ++DELIHKW
Subjt:  LAPNVDELIHKW

A0A6J1DNS4 S-protein homolog

1.0e-35

66.36

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Query:  IPMVNGLN-QIFFVSCKSKDTDI-GHFLDLGAEIVWHFEPNTWGTTLYWCY-----AKVSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIYLRNLA
        I + NGL+  I +VSCKSKDT+I GHFLDLGA I WHFEPN WGTTL+WC+     AK SFDVFW E +  WL ERCGG    + IWIVKDD IY+RNL 
Subjt:  IPMVNGLN-QIFFVSCKSKDTDI-GHFLDLGAEIVWHFEPNTWGTTLYWCY-----AKVSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIYLRNLA

Query:  PNVDELIHKW
         NVDELIHKW
Subjt:  PNVDELIHKW

A0A6J1DPK8 S-protein homolog

4.2e-29

57.14

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Query:  WHIPMVNGL-NQIFFVSCKSKDTDIG-HFLDLGAEIVWHFEPNTWGTTLYWCYAK-----VSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIYLRN
        W + + NGL ++I F+ CKSKDTDIG   LDLGA+I W F+ N WGTTLYWC+ +     VS DVFW E K  WL  RC      S IWI KDD IY+RN
Subjt:  WHIPMVNGL-NQIFFVSCKSKDTDIG-HFLDLGAEIVWHFEPNTWGTTLYWCYAK-----VSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIYLRN

Query:  LAPNVDELIHKW
        L+ NVDE+IHKW
Subjt:  LAPNVDELIHKW

A0A6J1DPP7 S-protein homolog

1.9e-42

74.77

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Query:  WHIPMVNGLNQIFFVSCKSKDTDIG-HFLDLGAEIVWHFEPNTWGTTLYWCY-----AKVSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIYLRNL
        +H+ MVNGL++I FV CKSKDT+IG HFLDLGAEIVWHFE N WGTTLYWCY     AKVSFDVFW+E K  WLGERCGG GV +LIWI K+D IYLRNL
Subjt:  WHIPMVNGLNQIFFVSCKSKDTDIG-HFLDLGAEIVWHFEPNTWGTTLYWCY-----AKVSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIYLRNL

Query:  APNVDELIHKW
          NVDELIHKW
Subjt:  APNVDELIHKW

SwissProt top hits

e value

%identity

Alignment

P0DN93 S-protein homolog 29

4.5e-04

33.78

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Query:  VSCKSKDTDIG-HFLDLGAEIVWHFEPNTWGTTLYWCYAKVSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDD
        +SC+SKD D+G H L  G   +W F P+ + TTL+ C    + +V W ++   +  +R  GH   S  W +  D
Subjt:  VSCKSKDTDIG-HFLDLGAEIVWHFEPNTWGTTLYWCYAKVSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDD

Q9LW22 S-protein homolog 21

3.1e-05

32.63

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Query:  IPMVNGLN----QIFFVSCKSKDTDIG-HFLDLGAEIVWHFEPNTWGTTLYWC--YAKVSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIY
        I + N LN     I  V CKSK+ DIG  +L +G  + + F+ N WGTT +WC  Y    +  +   + +  +G         S  W+ +DD IY
Subjt:  IPMVNGLN----QIFFVSCKSKDTDIG-HFLDLGAEIVWHFEPNTWGTTLYWC--YAKVSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIY

Arabidopsis top hits

e value

%identity

Alignment

AT3G26880.1 Plant self-incompatibility protein S1 family

2.2e-06

32.63

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Query:  IPMVNGLN----QIFFVSCKSKDTDIG-HFLDLGAEIVWHFEPNTWGTTLYWC--YAKVSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIY
        I + N LN     I  V CKSK+ DIG  +L +G  + + F+ N WGTT +WC  Y    +  +   + +  +G         S  W+ +DD IY
Subjt:  IPMVNGLN----QIFFVSCKSKDTDIG-HFLDLGAEIVWHFEPNTWGTTLYWC--YAKVSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIY

AT5G04047.1 Plant self-incompatibility protein S1 family

3.8e-06

25.47

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Query:  GLNQIFFVSCKSKDTDIGHFLDLGAEIVWHFEPNTWGTTLYWCYA--------KVSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIYLRNLAPNVD
        G N+   ++C+S          L    VW  +   +  TL WC             F+ F    K  ++ + CGG       W  ++D IY+RN A    
Subjt:  GLNQIFFVSCKSKDTDIGHFLDLGAEIVWHFEPNTWGTTLYWCYA--------KVSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIYLRNLAPNVD

Query:  ELIHKW
        +L++KW
Subjt:  ELIHKW

Sequences

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CDS sequence

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TGGCACATTCCTATGGTGAATGGGCTGAATCAAATTTTTTTTGTGAGCTGCAAGTCTAAAGACACTGATATTGGGCACTTCTTAGACCTTGGAGCAGAAATCGTATGGCA
CTTTGAGCCAAACACTTGGGGAACGACACTATATTGGTGCTATGCTAAAGTCTCGTTTGATGTCTTCTGGACTGAAAGTAAACATCATTGGCTCGGCGAGAGGTGCGGCG
GCCACGGAGTAAAAAGTCTTATTTGGATAGTCAAAGATGACGAAATTTACTTAAGAAACCTTGCTCCTAATGTCGATGAGTTGATTCATAAGTGG

mRNA sequence

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Protein sequence

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WHIPMVNGLNQIFFVSCKSKDTDIGHFLDLGAEIVWHFEPNTWGTTLYWCYAKVSFDVFWTESKHHWLGERCGGHGVKSLIWIVKDDEIYLRNLAPNVDELIHKW

MS009692 (gene) of Bitter gourd (TR) v1 genome