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MS009693 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009693
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold813:3284108..3284542
RNA-Seq ExpressionMS009693
SyntenyMS009693
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143724.1 S-protein homolog 1-like [Momordica charantia]1.7e-3046.9Show/hide
Query:  VLLVWSALVVAAAGQDQLSPVVDVIRKGRQSNVFHLHMVNGL-DEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFW
        +L V +AL VA        P V+ +      + +H+H+VNGL +  +F  CKS+DT++G+H L+ GAEI W F+ N+WGTTL+WC+  K G   SFDVFW
Subjt:  VLLVWSALVVAAAGQDQLSPVVDVIRKGRQSNVFHLHMVNGL-DEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFW

Query:  SEKTQ-WLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDELIHKW
         E    WL  RC   G    IW AK+DGIY+RN+  N+DEL+HKW
Subjt:  SEKTQ-WLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDELIHKW

XP_022148919.1 S-protein homolog 1-like [Momordica charantia]1.2e-3148.32Show/hide
Query:  VLLVWSALVVAAAGQ--DQLSPVVDVIRKGRQSNVFHLHMVNGLD-EIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDV
        +LLV ++L+V A  Q   Q+   +  I        +H+H+VNGL  + +FV CKSKD ++G H L  G EI W F+ N+WGTTL+WC+  K GA  SFDV
Subjt:  VLLVWSALVVAAAGQ--DQLSPVVDVIRKGRQSNVFHLHMVNGLD-EIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDV

Query:  FWSE-KTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDELIHKWNE
        FW E +  WL  RC    +L  IWIAK+DGIYLRN + ++DELIHKW +
Subjt:  FWSE-KTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDELIHKWNE

XP_022155209.1 S-protein homolog 1-like [Momordica charantia]1.3e-3857.43Show/hide
Query:  VLLVWSALVVAAAGQDQLSPVVDVIRKGR-QSNVFHLHMVNGL-DEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVF
        VLLV SAL+V   G  QL P+VDV  K R    V+ +++ NGL  EI+F+ CKSKDT+IG+  LDLGA+I W F+ N WGTTLYWC+  K    VS DVF
Subjt:  VLLVWSALVVAAAGQDQLSPVVDVIRKGR-QSNVFHLHMVNGL-DEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVF

Query:  WSE-KTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDELIHKWNE
        W E KT WL  RC  +  ++ IWIAK+DGIY+RNL++NVDE+IHKWNE
Subjt:  WSE-KTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDELIHKWNE

XP_022155227.1 S-protein homolog 74-like [Momordica charantia]1.1e-5068.24Show/hide
Query:  VLLVWSALVVAAAG-QDQLSPVVDVIRKGRQSNVFHLHMVNGLD-EIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVF
        VLLVWSALVVAAA  Q QL PVV+V      S  F +H+ NGL  +I +V CKSKDTNIG HFLDLGA I WHFE N WGTTL+WC+A+K+GAK SFDVF
Subjt:  VLLVWSALVVAAAG-QDQLSPVVDVIRKGRQSNVFHLHMVNGLD-EIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVF

Query:  WSEK-TQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDELIHKWNE
        W EK + WL ERCGG   L  IWI K+DGIY+RNLT+NVDELIHKWNE
Subjt:  WSEK-TQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDELIHKWNE

XP_022155249.1 S-protein homolog 1-like [Momordica charantia]2.7e-81100Show/hide
Query:  VLLVWSALVVAAAGQDQLSPVVDVIRKGRQSNVFHLHMVNGLDEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFWS
        VLLVWSALVVAAAGQDQLSPVVDVIRKGRQSNVFHLHMVNGLDEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFWS
Subjt:  VLLVWSALVVAAAGQDQLSPVVDVIRKGRQSNVFHLHMVNGLDEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFWS

Query:  EKTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDELIHKWNE
        EKTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDELIHKWNE
Subjt:  EKTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDELIHKWNE

TrEMBL top hitse value%identityAlignment
A0A6J1CQ65 S-protein homolog8.1e-3146.9Show/hide
Query:  VLLVWSALVVAAAGQDQLSPVVDVIRKGRQSNVFHLHMVNGL-DEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFW
        +L V +AL VA        P V+ +      + +H+H+VNGL +  +F  CKS+DT++G+H L+ GAEI W F+ N+WGTTL+WC+  K G   SFDVFW
Subjt:  VLLVWSALVVAAAGQDQLSPVVDVIRKGRQSNVFHLHMVNGL-DEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFW

Query:  SEKTQ-WLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDELIHKW
         E    WL  RC   G    IW AK+DGIY+RN+  N+DEL+HKW
Subjt:  SEKTQ-WLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDELIHKW

A0A6J1D5G6 S-protein homolog5.6e-3248.32Show/hide
Query:  VLLVWSALVVAAAGQ--DQLSPVVDVIRKGRQSNVFHLHMVNGLD-EIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDV
        +LLV ++L+V A  Q   Q+   +  I        +H+H+VNGL  + +FV CKSKD ++G H L  G EI W F+ N+WGTTL+WC+  K GA  SFDV
Subjt:  VLLVWSALVVAAAGQ--DQLSPVVDVIRKGRQSNVFHLHMVNGLD-EIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDV

Query:  FWSE-KTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDELIHKWNE
        FW E +  WL  RC    +L  IWIAK+DGIYLRN + ++DELIHKW +
Subjt:  FWSE-KTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDELIHKWNE

A0A6J1DNS4 S-protein homolog5.4e-5168.24Show/hide
Query:  VLLVWSALVVAAAG-QDQLSPVVDVIRKGRQSNVFHLHMVNGLD-EIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVF
        VLLVWSALVVAAA  Q QL PVV+V      S  F +H+ NGL  +I +V CKSKDTNIG HFLDLGA I WHFE N WGTTL+WC+A+K+GAK SFDVF
Subjt:  VLLVWSALVVAAAG-QDQLSPVVDVIRKGRQSNVFHLHMVNGLD-EIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVF

Query:  WSEK-TQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDELIHKWNE
        W EK + WL ERCGG   L  IWI K+DGIY+RNLT+NVDELIHKWNE
Subjt:  WSEK-TQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDELIHKWNE

A0A6J1DPK8 S-protein homolog6.2e-3957.43Show/hide
Query:  VLLVWSALVVAAAGQDQLSPVVDVIRKGR-QSNVFHLHMVNGL-DEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVF
        VLLV SAL+V   G  QL P+VDV  K R    V+ +++ NGL  EI+F+ CKSKDT+IG+  LDLGA+I W F+ N WGTTLYWC+  K    VS DVF
Subjt:  VLLVWSALVVAAAGQDQLSPVVDVIRKGR-QSNVFHLHMVNGL-DEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVF

Query:  WSE-KTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDELIHKWNE
        W E KT WL  RC  +  ++ IWIAK+DGIY+RNL++NVDE+IHKWNE
Subjt:  WSE-KTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDELIHKWNE

A0A6J1DPP7 S-protein homolog1.3e-81100Show/hide
Query:  VLLVWSALVVAAAGQDQLSPVVDVIRKGRQSNVFHLHMVNGLDEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFWS
        VLLVWSALVVAAAGQDQLSPVVDVIRKGRQSNVFHLHMVNGLDEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFWS
Subjt:  VLLVWSALVVAAAGQDQLSPVVDVIRKGRQSNVFHLHMVNGLDEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFWS

Query:  EKTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDELIHKWNE
        EKTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDELIHKWNE
Subjt:  EKTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDELIHKWNE

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 61.1e-0833.33Show/hide
Query:  NGLDEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWC-YAAKAGAKVSFDVFWSEKTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDE
        N  D ++ V CKS+D + G H L  G    W F  N   +TLY+C ++ +   K  FD++ + +      RC      N  W AKEDGIY        + 
Subjt:  NGLDEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWC-YAAKAGAKVSFDVFWSEKTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKNVDE

Query:  LIHKW
        L +KW
Subjt:  LIHKW

F4JLS0 S-protein homolog 12.7e-1537.96Show/hide
Query:  MVNGL--DEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFWSEKTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKN
        +VNGL   E +F+ CKSK+ ++G+  L       W+F  N+  +T +WCY  K    ++ +VFW +    L  RCG +   N IW AK DG+YL N    
Subjt:  MVNGL--DEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFWSEKTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKN

Query:  VDELIHKW
         D L  KW
Subjt:  VDELIHKW

P0DN94 S-protein homolog 177.8e-0730.59Show/hide
Query:  IFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFWSEKTQWLGERCGGRGVLNLIWIAKEDGIYLR
        +++RC SKD  +G H + +G   + +F  N WGTT + C   +    + +  F + K   + +  G        W A+EDGIYL+
Subjt:  IFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFWSEKTQWLGERCGGRGVLNLIWIAKEDGIYLR

Q2HQ46 S-protein homolog 741.7e-1437.04Show/hide
Query:  MVNGL--DEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFWSEKTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKN
        + NGL   E +F+ CKSK+ ++GD  L       W+F  N+  +TL+WCY +K    ++  VFW +    L  RC  +   N +W AK DG+YL N    
Subjt:  MVNGL--DEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFWSEKTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKN

Query:  VDELIHKW
         D L  KW
Subjt:  VDELIHKW

Q9LW22 S-protein homolog 212.1e-0729.41Show/hide
Query:  GRQSNVFHLHMVNGLDE-IIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFWSEKTQWLGERCGGRGVLNLIWIAKEDG
        G++S +   + +N  ++ I+ V CKSK+ +IG  +L +G  + + F+ N WGTT +WC   K      +    + +   L  + G     +  W+A++DG
Subjt:  GRQSNVFHLHMVNGLDE-IIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFWSEKTQWLGERCGGRGVLNLIWIAKEDG

Query:  IY
        IY
Subjt:  IY

Arabidopsis top hitse value%identityAlignment
AT1G28305.1 Plant self-incompatibility protein S1 family2.9e-0931.9Show/hide
Query:  LHMVNGLD-----EIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWC---YAAKAGAKVSFDVFWSEKTQWLGERCGGRGVLNLIWIAKEDGI
        LH+ N LD       +FV+CKS   ++G H++  G    +    N W TTL+WC   +         FDV+  +     G   GG       W A+EDGI
Subjt:  LHMVNGLD-----EIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWC---YAAKAGAKVSFDVFWSEKTQWLGERCGGRGVLNLIWIAKEDGI

Query:  YLRNLTKNVDELIHKW
        Y R L +     +H W
Subjt:  YLRNLTKNVDELIHKW

AT3G26880.1 Plant self-incompatibility protein S1 family1.5e-0829.41Show/hide
Query:  GRQSNVFHLHMVNGLDE-IIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFWSEKTQWLGERCGGRGVLNLIWIAKEDG
        G++S +   + +N  ++ I+ V CKSK+ +IG  +L +G  + + F+ N WGTT +WC   K      +    + +   L  + G     +  W+A++DG
Subjt:  GRQSNVFHLHMVNGLDE-IIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFWSEKTQWLGERCGGRGVLNLIWIAKEDG

Query:  IY
        IY
Subjt:  IY

AT4G16295.1 S-protein homologue 11.9e-1637.96Show/hide
Query:  MVNGL--DEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFWSEKTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKN
        +VNGL   E +F+ CKSK+ ++G+  L       W+F  N+  +T +WCY  K    ++ +VFW +    L  RCG +   N IW AK DG+YL N    
Subjt:  MVNGL--DEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFWSEKTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKN

Query:  VDELIHKW
         D L  KW
Subjt:  VDELIHKW

AT4G29035.1 Plant self-incompatibility protein S1 family1.2e-1537.04Show/hide
Query:  MVNGL--DEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFWSEKTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKN
        + NGL   E +F+ CKSK+ ++GD  L       W+F  N+  +TL+WCY +K    ++  VFW +    L  RC  +   N +W AK DG+YL N    
Subjt:  MVNGL--DEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFWSEKTQWLGERCGGRGVLNLIWIAKEDGIYLRNLTKN

Query:  VDELIHKW
         D L  KW
Subjt:  VDELIHKW

AT5G04347.1 Plant self-incompatibility protein S1 family1.7e-1238.2Show/hide
Query:  DEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKA---GAKVSFDVFWSEKTQWLGERCGGRGVLNLIWIAKEDGIY
        ++++ VRC+SKD N+GDH L +G     +F+ N+W  TL+WC   K       V+FD + S+    +G R         +WIA+EDGIY
Subjt:  DEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKA---GAKVSFDVFWSEKTQWLGERCGGRGVLNLIWIAKEDGIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGTTGCTTGTCTGGTCGGCTCTGGTGGTGGCGGCGGCGGGTCAAGACCAATTATCGCCGGTGGTGGATGTGATAAGAAAAGGCAGGCAGTCTAACGTATTCCACCTTCA
TATGGTGAATGGGCTCGATGAAATTATCTTTGTGCGCTGCAAGTCCAAAGACACTAACATTGGGGACCATTTCTTAGACCTTGGAGCTGAAATCGTGTGGCACTTTGAGG
CCAACATTTGGGGAACCACACTGTATTGGTGCTATGCTGCGAAGGCCGGGGCCAAAGTCTCGTTCGATGTCTTCTGGTCTGAAAAAACTCAGTGGCTCGGCGAGAGATGC
GGCGGTCGCGGAGTGTTAAATCTTATTTGGATTGCTAAAGAAGACGGAATTTACCTAAGAAACCTTACTAAGAATGTCGATGAGCTTATTCATAAGTGGAATGAG
mRNA sequenceShow/hide mRNA sequence
GTGTTGCTTGTCTGGTCGGCTCTGGTGGTGGCGGCGGCGGGTCAAGACCAATTATCGCCGGTGGTGGATGTGATAAGAAAAGGCAGGCAGTCTAACGTATTCCACCTTCA
TATGGTGAATGGGCTCGATGAAATTATCTTTGTGCGCTGCAAGTCCAAAGACACTAACATTGGGGACCATTTCTTAGACCTTGGAGCTGAAATCGTGTGGCACTTTGAGG
CCAACATTTGGGGAACCACACTGTATTGGTGCTATGCTGCGAAGGCCGGGGCCAAAGTCTCGTTCGATGTCTTCTGGTCTGAAAAAACTCAGTGGCTCGGCGAGAGATGC
GGCGGTCGCGGAGTGTTAAATCTTATTTGGATTGCTAAAGAAGACGGAATTTACCTAAGAAACCTTACTAAGAATGTCGATGAGCTTATTCATAAGTGGAATGAG
Protein sequenceShow/hide protein sequence
VLLVWSALVVAAAGQDQLSPVVDVIRKGRQSNVFHLHMVNGLDEIIFVRCKSKDTNIGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFWSEKTQWLGERC
GGRGVLNLIWIAKEDGIYLRNLTKNVDELIHKWNE