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MS009703 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009703
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLipoxygenase
Genome locationscaffold411:22461..22562
RNA-Seq ExpressionMS009703
SyntenyMS009703
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0031408 - oxylipin biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000907 - Lipoxygenase
IPR013819 - Lipoxygenase, C-terminal
IPR036226 - Lipoxigenase, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593895.1 putative linoleate 9S-lipoxygenase 5, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1097.06Show/hide
Query:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD
        YPYAGYLPNRPTVSRRFMPEPGTPE+RELETDPD
Subjt:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD

XP_022138650.1 probable linoleate 9S-lipoxygenase 5 [Momordica charantia]1.7e-1097.06Show/hide
Query:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD
        YPYAGYLPNRPTVSRR MPEPGTPEYRELETDPD
Subjt:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD

XP_022930397.1 probable linoleate 9S-lipoxygenase 5 [Cucurbita moschata]1.0e-1097.06Show/hide
Query:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD
        YPYAGYLPNRPTVSRRFMPEPGTPE+RELETDPD
Subjt:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD

XP_022999947.1 probable linoleate 9S-lipoxygenase 5 [Cucurbita maxima]1.0e-1097.06Show/hide
Query:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD
        YPYAGYLPNRPTVSRRFMPEPGTPE+RELETDPD
Subjt:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD

XP_023514286.1 probable linoleate 9S-lipoxygenase 5 [Cucurbita pepo subsp. pepo]1.0e-1097.06Show/hide
Query:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD
        YPYAGYLPNRPTVSRRFMPEPGTPE+RELETDPD
Subjt:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD

TrEMBL top hitse value%identityAlignment
A0A445BFL9 Lipoxygenase1.1e-1094.12Show/hide
Query:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD
        YPYAGYLPNRPTVSRRFMPEPGTPEY+ELE+DPD
Subjt:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD

A0A445BFQ7 Lipoxygenase1.1e-1094.12Show/hide
Query:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD
        YPYAGYLPNRPTVSRRFMPEPGTPEY+ELE+DPD
Subjt:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD

A0A6J1CA16 Lipoxygenase8.3e-1197.06Show/hide
Query:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD
        YPYAGYLPNRPTVSRR MPEPGTPEYRELETDPD
Subjt:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD

A0A6J1EQD3 Lipoxygenase4.8e-1197.06Show/hide
Query:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD
        YPYAGYLPNRPTVSRRFMPEPGTPE+RELETDPD
Subjt:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD

A0A6J1KC57 Lipoxygenase4.8e-1197.06Show/hide
Query:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD
        YPYAGYLPNRPTVSRRFMPEPGTPE+RELETDPD
Subjt:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD

SwissProt top hitse value%identityAlignment
O24379 Linoleate 9S-lipoxygenase 29.4e-1288.24Show/hide
Query:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD
        YPYAGYLPNRPTVSRRFMPEPGTPEY EL+ +PD
Subjt:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD

P37831 Linoleate 9S-lipoxygenase 19.4e-1288.24Show/hide
Query:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD
        YPYAGYLPNRPTVSRRFMPEPGTPEY EL+ +PD
Subjt:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD

Q41238 Linoleate 9S-lipoxygenase 6 (Fragment)9.4e-1288.24Show/hide
Query:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD
        YPYAGYLPNRPTVSRRFMPEPGTPEY EL+ +PD
Subjt:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD

Q43190 Probable linoleate 9S-lipoxygenase 49.4e-1288.24Show/hide
Query:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD
        YPYAGYLPNRPTVSRRFMPEPGTPEY EL+ +PD
Subjt:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD

Q43191 Probable linoleate 9S-lipoxygenase 54.2e-1288.24Show/hide
Query:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD
        YPYAGYLPNRPT+SRRFMPEPGTPEY EL+T+PD
Subjt:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD

Arabidopsis top hitse value%identityAlignment
AT1G17420.1 lipoxygenase 31.5e-0447.06Show/hide
Query:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD
        YPY GY+PNRP + RR +P+   PEY    + P+
Subjt:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD

AT1G55020.1 lipoxygenase 15.8e-0967.65Show/hide
Query:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD
        YP AGYLPNRPT+SR++MP+  TPE+ ELE +PD
Subjt:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD

AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein1.5e-0448.48Show/hide
Query:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDP
        YPY GY+PNRP + RR +P+   PE+     DP
Subjt:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDP

AT3G22400.1 PLAT/LH2 domain-containing lipoxygenase family protein1.6e-1185.29Show/hide
Query:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD
        YPYAG+LPNRPTVSRRFMPEPGT EY ELE D D
Subjt:  YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TACCCCTACGCCGGCTACCTACCGAATCGCCCGACAGTGAGCCGCCGATTCATGCCGGAACCGGGCACGCCTGAGTACAGAGAGCTCGAGACCGATCCCGAT
mRNA sequenceShow/hide mRNA sequence
TACCCCTACGCCGGCTACCTACCGAATCGCCCGACAGTGAGCCGCCGATTCATGCCGGAACCGGGCACGCCTGAGTACAGAGAGCTCGAGACCGATCCCGAT
Protein sequenceShow/hide protein sequence
YPYAGYLPNRPTVSRRFMPEPGTPEYRELETDPD