; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS009707 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009707
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionendonuclease MutS2 isoform X1
Genome locationscaffold411:44708..55063
RNA-Seq ExpressionMS009707
SyntenyMS009707
Gene Ontology termsGO:0006298 - mismatch repair (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0004519 - endonuclease activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0030983 - mismatched DNA binding (molecular function)
InterPro domainsIPR000432 - DNA mismatch repair protein MutS, C-terminal
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR045076 - DNA mismatch repair MutS family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141291.1 uncharacterized protein LOC111011726 isoform X1 [Momordica charantia]1.8e-14297.86Show/hide
Query:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
        VGAGTNPM+GAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
Subjt:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA

Query:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM
        SAQIDEVIIDME IKKNYEELLQEAQDHLM SKNLYEKMLLARKKIIKH REQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRV M
Subjt:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM

Query:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR
        SSNKLATDGKKNLTALYSRISSTGHISQPRS KLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR
Subjt:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR

XP_022141292.1 uncharacterized protein LOC111011726 isoform X2 [Momordica charantia]1.8e-14297.86Show/hide
Query:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
        VGAGTNPM+GAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
Subjt:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA

Query:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM
        SAQIDEVIIDME IKKNYEELLQEAQDHLM SKNLYEKMLLARKKIIKH REQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRV M
Subjt:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM

Query:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR
        SSNKLATDGKKNLTALYSRISSTGHISQPRS KLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR
Subjt:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR

XP_022141293.1 uncharacterized protein LOC111011726 isoform X3 [Momordica charantia]1.8e-14297.86Show/hide
Query:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
        VGAGTNPM+GAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
Subjt:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA

Query:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM
        SAQIDEVIIDME IKKNYEELLQEAQDHLM SKNLYEKMLLARKKIIKH REQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRV M
Subjt:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM

Query:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR
        SSNKLATDGKKNLTALYSRISSTGHISQPRS KLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR
Subjt:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR

XP_022141294.1 uncharacterized protein LOC111011726 isoform X4 [Momordica charantia]1.8e-14297.86Show/hide
Query:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
        VGAGTNPM+GAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
Subjt:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA

Query:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM
        SAQIDEVIIDME IKKNYEELLQEAQDHLM SKNLYEKMLLARKKIIKH REQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRV M
Subjt:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM

Query:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR
        SSNKLATDGKKNLTALYSRISSTGHISQPRS KLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR
Subjt:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR

XP_022141295.1 uncharacterized protein LOC111011726 isoform X5 [Momordica charantia]1.8e-14297.86Show/hide
Query:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
        VGAGTNPM+GAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
Subjt:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA

Query:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM
        SAQIDEVIIDME IKKNYEELLQEAQDHLM SKNLYEKMLLARKKIIKH REQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRV M
Subjt:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM

Query:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR
        SSNKLATDGKKNLTALYSRISSTGHISQPRS KLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR
Subjt:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR

TrEMBL top hitse value%identityAlignment
A0A6J1CHN4 uncharacterized protein LOC111011726 isoform X58.9e-14397.86Show/hide
Query:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
        VGAGTNPM+GAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
Subjt:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA

Query:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM
        SAQIDEVIIDME IKKNYEELLQEAQDHLM SKNLYEKMLLARKKIIKH REQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRV M
Subjt:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM

Query:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR
        SSNKLATDGKKNLTALYSRISSTGHISQPRS KLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR
Subjt:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR

A0A6J1CI69 uncharacterized protein LOC111011726 isoform X48.9e-14397.86Show/hide
Query:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
        VGAGTNPM+GAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
Subjt:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA

Query:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM
        SAQIDEVIIDME IKKNYEELLQEAQDHLM SKNLYEKMLLARKKIIKH REQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRV M
Subjt:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM

Query:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR
        SSNKLATDGKKNLTALYSRISSTGHISQPRS KLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR
Subjt:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR

A0A6J1CIQ4 uncharacterized protein LOC111011726 isoform X18.9e-14397.86Show/hide
Query:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
        VGAGTNPM+GAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
Subjt:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA

Query:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM
        SAQIDEVIIDME IKKNYEELLQEAQDHLM SKNLYEKMLLARKKIIKH REQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRV M
Subjt:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM

Query:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR
        SSNKLATDGKKNLTALYSRISSTGHISQPRS KLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR
Subjt:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR

A0A6J1CJG8 uncharacterized protein LOC111011726 isoform X28.9e-14397.86Show/hide
Query:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
        VGAGTNPM+GAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
Subjt:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA

Query:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM
        SAQIDEVIIDME IKKNYEELLQEAQDHLM SKNLYEKMLLARKKIIKH REQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRV M
Subjt:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM

Query:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR
        SSNKLATDGKKNLTALYSRISSTGHISQPRS KLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR
Subjt:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR

A0A6J1CK29 uncharacterized protein LOC111011726 isoform X38.9e-14397.86Show/hide
Query:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
        VGAGTNPM+GAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
Subjt:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA

Query:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM
        SAQIDEVIIDME IKKNYEELLQEAQDHLM SKNLYEKMLLARKKIIKH REQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRV M
Subjt:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM

Query:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR
        SSNKLATDGKKNLTALYSRISSTGHISQPRS KLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR
Subjt:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR

SwissProt top hitse value%identityAlignment
A6U0W1 Endonuclease MutS24.8e-2934.15Show/hide
Query:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
        +GAGT+P +GAAL MS+L+   K G SL +ATTH+ ELK   Y+ E   NA +EFD   L PTYK+L GVPGRSNA +I+++LGL   +++ A+   G  
Subjt:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA

Query:  SAQIDEVIIDMERIKKNYE-------ELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIR
          +I+E+I  +ER  K  E        L++EA+    D    Y++     K +I+  +E    K  +  KAA     ++ K +R+L             R
Subjt:  SAQIDEVIIDMERIKKNYE-------ELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIR

Query:  SRQRVRMSSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDM
         ++   +  ++L  D KK L   Y   S   ++ + + +K+     GD V V S G++  VL +  + +E +VQ+G IK+KL   D+
Subjt:  SRQRVRMSSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDM

A7X169 Endonuclease MutS24.8e-2934.15Show/hide
Query:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
        +GAGT+P +GAAL MS+L+   K G SL +ATTH+ ELK   Y+ E   NA +EFD   L PTYK+L GVPGRSNA +I+++LGL   +++ A+   G  
Subjt:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA

Query:  SAQIDEVIIDMERIKKNYE-------ELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIR
          +I+E+I  +ER  K  E        L++EA+    D    Y++     K +I+  +E    K  +  KAA     ++ K +R+L             R
Subjt:  SAQIDEVIIDMERIKKNYE-------ELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIR

Query:  SRQRVRMSSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDM
         ++   +  ++L  D KK L   Y   S   ++ + + +K+     GD V V S G++  VL +  + +E +VQ+G IK+KL   D+
Subjt:  SRQRVRMSSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDM

A9VJL2 Endonuclease MutS22.6e-3034.84Show/hide
Query:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
        +GAGT+P +GAAL +S+L+     GA + +ATTH+ ELK   Y+ E   NA +EFD   L PTYK+L GVPGRSNA  I++RLGL   V+D AR H    
Subjt:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA

Query:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHG--REQRLIKVQ----EVSKAAATARSNLHKKVRELR-ASAIESSPPTAIR
        + +I+ +I  +E  +KN E   +EA++H   S+ L+ ++   +++II+    R+++L+K Q    E  +AA      + +++R+LR A  I       I 
Subjt:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHG--REQRLIKVQ----EVSKAAATARSNLHKKVRELR-ASAIESSPPTAIR

Query:  SRQRVRMSSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDM
        ++ R+  ++ +L    K N       + +T    Q RS        GD V V + G++  +L  + S  E  VQ+G +K+K+K ++M
Subjt:  SRQRVRMSSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDM

B9KYW4 Endonuclease MutS21.3e-2932.36Show/hide
Query:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
        + AGT+P +GAAL  ++LE   + GA L I TTH+ ELK         ENA +EFD V L PTY++L G+PGRS+A+ +A RLGLP  V+  ARE  G+ 
Subjt:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA

Query:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVREL-RASAIESSPPTAIRSRQRVR
        + Q+D +I +M+R  +  E L   A+     S+   E++  A ++++     +R    QEV +      +   +  R++ RA+   + PP          
Subjt:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVREL-RASAIESSPPTAIRSRQRVR

Query:  MSSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLK
            ++  D  + L  +  R+ S+G   Q R E++    VGD V +++LG E  V+++ P  +E+ V++G  +++
Subjt:  MSSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLK

P73625 Endonuclease MutS21.3e-3433.93Show/hide
Query:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
        VGAGT+P +G+AL ++LL   A     LT+ATTH+GELK LKY +  FENA +EFD+ +L PTY++LWG+PGRSNA+ IA+RLGLP  +V+ A++  G  
Subjt:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA

Query:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM
        S  I++VI  +E  ++  E+    AQ  L +++  Y+++      +    RE +  + QEV +A A A+  + K +R+L     +   P+A +++Q   +
Subjt:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM

Query:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDM
             A    K                 P+    + PTVG+ + + S G+ A V  V  +   + V +G +K+ +   D+
Subjt:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDM

Arabidopsis top hitse value%identityAlignment
AT1G65070.1 DNA mismatch repair protein MutS, type 24.8e-1625.25Show/hide
Query:  AGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAASA
        +GT+P +G AL  S+L+ + K+  ++ + +TH+G+L  LK +   F+NA MEF    L+PT+++LWG  G SNA+ +A+ +G    ++++A +     + 
Subjt:  AGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAASA

Query:  QIDEVIIDMERIKKNYEELLQEAQDHLM----------DSKNLYEKMLLARKKIIKHGREQRLIK--VQEVSKAAATARSNLHKKVRE----LRASAIES
        +      D+ER    ++ L++E     +          D  NLY ++      + K  RE+ L+K   Q+V +   +A+S + + V E    L  +  + 
Subjt:  QIDEVIIDMERIKKNYEELLQEAQDHLM----------DSKNLYEKMLLARKKIIKHGREQRLIK--VQEVSKAAATARSNLHKKVRE----LRASAIES

Query:  SPPTAIRSRQRVRMSSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDE--MVVQVGSIKLKLKFTDMR
             +++ + V             +L   YS  S               P  G+ V V+ LG +   +  EP  D+  ++VQ G I++++K  D++
Subjt:  SPPTAIRSRQRVRMSSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDE--MVVQVGSIKLKLKFTDMR

AT1G65070.2 DNA mismatch repair protein MutS, type 24.8e-1625.25Show/hide
Query:  AGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAASA
        +GT+P +G AL  S+L+ + K+  ++ + +TH+G+L  LK +   F+NA MEF    L+PT+++LWG  G SNA+ +A+ +G    ++++A +     + 
Subjt:  AGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAASA

Query:  QIDEVIIDMERIKKNYEELLQEAQDHLM----------DSKNLYEKMLLARKKIIKHGREQRLIK--VQEVSKAAATARSNLHKKVRE----LRASAIES
        +      D+ER    ++ L++E     +          D  NLY ++      + K  RE+ L+K   Q+V +   +A+S + + V E    L  +  + 
Subjt:  QIDEVIIDMERIKKNYEELLQEAQDHLM----------DSKNLYEKMLLARKKIIKHGREQRLIK--VQEVSKAAATARSNLHKKVRE----LRASAIES

Query:  SPPTAIRSRQRVRMSSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDE--MVVQVGSIKLKLKFTDMR
             +++ + V             +L   YS  S               P  G+ V V+ LG +   +  EP  D+  ++VQ G I++++K  D++
Subjt:  SPPTAIRSRQRVRMSSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDE--MVVQVGSIKLKLKFTDMR

AT5G54090.1 DNA mismatch repair protein MutS, type 27.3e-7352.14Show/hide
Query:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA
        VGAGTNP++GAALGM++LESFA+SG+ LT+ATTHHGELKTLKYSN  FENACMEFD++NLKPTYKILWGVPGRSNAINIA+RLGLP  +++ ARE YG+A
Subjt:  VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAA

Query:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM
        SA+I+EVI+DMER K+ Y+ LL E++ ++  S+ L+E +L A+K I  H  ++R    QE+++A +  RS L + +++ R+SA +SS  + + ++ + ++
Subjt:  SAQIDEVIIDMERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRM

Query:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDM
         + K   +G ++ + +  R         P +   + P VG +V+VSSLGK+ATVL VE SK E++VQVG +K+K+K TD+
Subjt:  SSNKLATDGKKNLTALYSRISSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTGGTGCAGGAACCAATCCTATGGACGGAGCCGCACTTGGGATGTCACTCCTGGAATCTTTTGCTAAATCTGGTGCTTCATTGACAATCGCAACTACACATCATGGAGA
ACTGAAAACCCTAAAATATAGCAATGAGGTGTTTGAAAATGCGTGTATGGAATTTGATGAGGTGAACTTAAAGCCAACTTACAAGATTCTTTGGGGAGTACCAGGGCGTT
CAAATGCTATTAATATAGCTGAAAGGTTAGGGTTGCCTGGTACTGTTGTAGATGATGCTCGGGAGCATTATGGTGCAGCAAGTGCACAGATAGATGAGGTCATAATCGAT
ATGGAACGTATCAAGAAAAATTATGAGGAGCTCTTACAAGAAGCTCAAGATCACTTGATGGACTCAAAAAATCTTTATGAAAAGATGTTGCTTGCTAGAAAAAAGATTAT
TAAACATGGCAGAGAACAGAGGCTTATAAAAGTGCAAGAGGTATCTAAGGCTGCAGCAACAGCTCGTTCTAATCTTCACAAAAAAGTACGAGAACTGCGTGCATCTGCAA
TTGAATCCTCCCCGCCCACTGCCATTCGTAGTAGGCAACGTGTACGAATGAGCTCTAATAAGCTAGCTACAGATGGCAAAAAGAACCTAACGGCATTATATTCGCGTATT
TCTTCAACTGGTCACATCAGTCAACCACGATCAGAGAAGCTTGAGTTTCCCACTGTTGGTGATACTGTGTACGTTTCTTCCCTTGGAAAAGAAGCGACAGTTTTAAGCGT
AGAGCCATCAAAAGACGAAATGGTTGTTCAAGTTGGTAGCATCAAGTTGAAGCTGAAGTTCACTGACATGAGA
mRNA sequenceShow/hide mRNA sequence
GTTGGTGCAGGAACCAATCCTATGGACGGAGCCGCACTTGGGATGTCACTCCTGGAATCTTTTGCTAAATCTGGTGCTTCATTGACAATCGCAACTACACATCATGGAGA
ACTGAAAACCCTAAAATATAGCAATGAGGTGTTTGAAAATGCGTGTATGGAATTTGATGAGGTGAACTTAAAGCCAACTTACAAGATTCTTTGGGGAGTACCAGGGCGTT
CAAATGCTATTAATATAGCTGAAAGGTTAGGGTTGCCTGGTACTGTTGTAGATGATGCTCGGGAGCATTATGGTGCAGCAAGTGCACAGATAGATGAGGTCATAATCGAT
ATGGAACGTATCAAGAAAAATTATGAGGAGCTCTTACAAGAAGCTCAAGATCACTTGATGGACTCAAAAAATCTTTATGAAAAGATGTTGCTTGCTAGAAAAAAGATTAT
TAAACATGGCAGAGAACAGAGGCTTATAAAAGTGCAAGAGGTATCTAAGGCTGCAGCAACAGCTCGTTCTAATCTTCACAAAAAAGTACGAGAACTGCGTGCATCTGCAA
TTGAATCCTCCCCGCCCACTGCCATTCGTAGTAGGCAACGTGTACGAATGAGCTCTAATAAGCTAGCTACAGATGGCAAAAAGAACCTAACGGCATTATATTCGCGTATT
TCTTCAACTGGTCACATCAGTCAACCACGATCAGAGAAGCTTGAGTTTCCCACTGTTGGTGATACTGTGTACGTTTCTTCCCTTGGAAAAGAAGCGACAGTTTTAAGCGT
AGAGCCATCAAAAGACGAAATGGTTGTTCAAGTTGGTAGCATCAAGTTGAAGCTGAAGTTCACTGACATGAGA
Protein sequenceShow/hide protein sequence
VGAGTNPMDGAALGMSLLESFAKSGASLTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPGTVVDDAREHYGAASAQIDEVIID
MERIKKNYEELLQEAQDHLMDSKNLYEKMLLARKKIIKHGREQRLIKVQEVSKAAATARSNLHKKVRELRASAIESSPPTAIRSRQRVRMSSNKLATDGKKNLTALYSRI
SSTGHISQPRSEKLEFPTVGDTVYVSSLGKEATVLSVEPSKDEMVVQVGSIKLKLKFTDMR