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MS009711 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009711
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold411:82532..82978
RNA-Seq ExpressionMS009711
SyntenyMS009711
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056646.1 uncharacterized protein E6C27_scaffold288G001770 [Cucumis melo var. makuwa]5.7e-1042.01Show/hide
Query:  MGGCASRPKGIDLNPTEVPATPKNKAEPE---------IVGGESQKEDASPPLLDLSD--QPKQEAPAGGHSDSTSAPSKPAEPEPVSVPVPEPAQAHVP
        MGGCAS+PKG+DL+PTEVP TP N+ +P+           G     E+AS  L+DLS   +PKQ+  A G     SAP            V    ++  P
Subjt:  MGGCASRPKGIDLNPTEVPATPKNKAEPE---------IVGGESQKEDASPPLLDLSD--QPKQEAPAGGHSDSTSAPSKPAEPEPVSVPVPEPAQAHVP

Query:  DLTSQLTTQAEKVEAIAKELEDKTEATVQTQTKDKEGH---------LKSDLTPT-SEDKTTVAPLVAA
        +LT       EKVE IAKE EDK EA VQ  T+ KEGH          KSD TPT + +  T+APL  A
Subjt:  DLTSQLTTQAEKVEAIAKELEDKTEATVQTQTKDKEGH---------LKSDLTPT-SEDKTTVAPLVAA

TYK04607.1 uncharacterized protein E5676_scaffold351G00110 [Cucumis melo var. makuwa]5.2e-1142.6Show/hide
Query:  MGGCASRPKGIDLNPTEVPATPKNKAEPE---------IVGGESQKEDASPPLLDLSD--QPKQEAPAGGHSDSTSAPSKPAEPEPVSVPVPEPAQAHVP
        MGGCAS+PKG+DL+PTEVP TP N+ +P+           G     E+AS  L+DLS   +PKQ+  A G     SAP            VP   ++  P
Subjt:  MGGCASRPKGIDLNPTEVPATPKNKAEPE---------IVGGESQKEDASPPLLDLSD--QPKQEAPAGGHSDSTSAPSKPAEPEPVSVPVPEPAQAHVP

Query:  DLTSQLTTQAEKVEAIAKELEDKTEATVQTQTKDKEGH---------LKSDLTPT-SEDKTTVAPLVAA
        +LT       EKVE IAKE EDK EA VQ  T+ KEGH          KSD TPT + +  T+APL  A
Subjt:  DLTSQLTTQAEKVEAIAKELEDKTEATVQTQTKDKEGH---------LKSDLTPT-SEDKTTVAPLVAA

XP_011653400.1 uncharacterized protein LOC105435210 [Cucumis sativus]9.1e-0844.58Show/hide
Query:  MGGCASRPKGIDLNPTEVPATPKNKAE---PEIV--GGESQKEDASPPLLDL--SDQPKQEAPAGGHSDSTSAPSKPAEPEPVSVPVPEPAQAHVPDLTS
        MGGCAS+PKG+DL+P+EV ATP NK +    EIV  G     + AS  L+DL  S++ KQ+  AGG            E EP S  VP   ++     T+
Subjt:  MGGCASRPKGIDLNPTEVPATPKNKAE---PEIV--GGESQKEDASPPLLDL--SDQPKQEAPAGGHSDSTSAPSKPAEPEPVSVPVPEPAQAHVPDLTS

Query:  QLTTQAEKVEAIAKELEDKTEATVQTQTKDKEGH-----------LKSDLTPTSEDKTTVAPLVAA
           TQAEKVE IAKE EDK+EA V+  T+ KEGH           L +  TPTSE K  +APL  A
Subjt:  QLTTQAEKVEAIAKELEDKTEATVQTQTKDKEGH-----------LKSDLTPTSEDKTTVAPLVAA

XP_038875809.1 uncharacterized protein LOC120068172 [Benincasa hispida]2.2e-0942.68Show/hide
Query:  MGGCASRPKGIDLNPTEVPATPKNKAEPEIV-----GGESQKEDASPPLLDLSD--QPKQEAPAGGHSDSTSAPSKPAEPEPVSVPVPEPAQAHVPDLTS
        MGGCAS+PKG+DL+P EVPATP +K +P+       G     E AS  L+DLS+  +PKQ+  AGG            EPEP +  VP   ++  P+L  
Subjt:  MGGCASRPKGIDLNPTEVPATPKNKAEPEIV-----GGESQKEDASPPLLDLSD--QPKQEAPAGGHSDSTSAPSKPAEPEPVSVPVPEPAQAHVPDLTS

Query:  QLTTQAEKVEAIAKELEDKTEATVQTQTKDKEGH--------LKSDLTPT-SEDKTTVAPLVAA
           T  EKVEAIAKE ED     +QT    KEGH         KSD TPT + +  T+AP+  A
Subjt:  QLTTQAEKVEAIAKELEDKTEATVQTQTKDKEGH--------LKSDLTPT-SEDKTTVAPLVAA

TrEMBL top hitse value%identityAlignment
A0A0A0KVU8 Uncharacterized protein4.4e-0844.58Show/hide
Query:  MGGCASRPKGIDLNPTEVPATPKNKAE---PEIV--GGESQKEDASPPLLDL--SDQPKQEAPAGGHSDSTSAPSKPAEPEPVSVPVPEPAQAHVPDLTS
        MGGCAS+PKG+DL+P+EV ATP NK +    EIV  G     + AS  L+DL  S++ KQ+  AGG            E EP S  VP   ++     T+
Subjt:  MGGCASRPKGIDLNPTEVPATPKNKAE---PEIV--GGESQKEDASPPLLDL--SDQPKQEAPAGGHSDSTSAPSKPAEPEPVSVPVPEPAQAHVPDLTS

Query:  QLTTQAEKVEAIAKELEDKTEATVQTQTKDKEGH-----------LKSDLTPTSEDKTTVAPLVAA
           TQAEKVE IAKE EDK+EA V+  T+ KEGH           L +  TPTSE K  +APL  A
Subjt:  QLTTQAEKVEAIAKELEDKTEATVQTQTKDKEGH-----------LKSDLTPTSEDKTTVAPLVAA

A0A5A7UQQ8 Uncharacterized protein2.8e-1042.01Show/hide
Query:  MGGCASRPKGIDLNPTEVPATPKNKAEPE---------IVGGESQKEDASPPLLDLSD--QPKQEAPAGGHSDSTSAPSKPAEPEPVSVPVPEPAQAHVP
        MGGCAS+PKG+DL+PTEVP TP N+ +P+           G     E+AS  L+DLS   +PKQ+  A G     SAP            V    ++  P
Subjt:  MGGCASRPKGIDLNPTEVPATPKNKAEPE---------IVGGESQKEDASPPLLDLSD--QPKQEAPAGGHSDSTSAPSKPAEPEPVSVPVPEPAQAHVP

Query:  DLTSQLTTQAEKVEAIAKELEDKTEATVQTQTKDKEGH---------LKSDLTPT-SEDKTTVAPLVAA
        +LT       EKVE IAKE EDK EA VQ  T+ KEGH          KSD TPT + +  T+APL  A
Subjt:  DLTSQLTTQAEKVEAIAKELEDKTEATVQTQTKDKEGH---------LKSDLTPT-SEDKTTVAPLVAA

A0A5D3BYJ6 Uncharacterized protein2.5e-1142.6Show/hide
Query:  MGGCASRPKGIDLNPTEVPATPKNKAEPE---------IVGGESQKEDASPPLLDLSD--QPKQEAPAGGHSDSTSAPSKPAEPEPVSVPVPEPAQAHVP
        MGGCAS+PKG+DL+PTEVP TP N+ +P+           G     E+AS  L+DLS   +PKQ+  A G     SAP            VP   ++  P
Subjt:  MGGCASRPKGIDLNPTEVPATPKNKAEPE---------IVGGESQKEDASPPLLDLSD--QPKQEAPAGGHSDSTSAPSKPAEPEPVSVPVPEPAQAHVP

Query:  DLTSQLTTQAEKVEAIAKELEDKTEATVQTQTKDKEGH---------LKSDLTPT-SEDKTTVAPLVAA
        +LT       EKVE IAKE EDK EA VQ  T+ KEGH          KSD TPT + +  T+APL  A
Subjt:  DLTSQLTTQAEKVEAIAKELEDKTEATVQTQTKDKEGH---------LKSDLTPT-SEDKTTVAPLVAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGTTGTGCGAGCAGACCCAAGGGCATCGATCTCAACCCAACCGAGGTTCCCGCCACACCTAAAAACAAGGCCGAGCCTGAAATCGTTGGAGGTGAGAGCCAAAA
AGAGGATGCATCGCCACCCTTGCTGGACCTGTCTGACCAACCAAAACAGGAAGCTCCTGCCGGTGGACATTCTGATTCGACCTCTGCACCATCCAAGCCTGCTGAACCAG
AACCAGTATCAGTACCAGTACCAGAGCCTGCCCAAGCCCATGTACCTGATTTGACTTCCCAGCTTACCACGCAGGCCGAGAAAGTGGAAGCCATTGCCAAGGAATTAGAG
GACAAGACTGAGGCTACTGTCCAAACCCAGACCAAGGACAAAGAGGGCCACCTCAAATCAGATCTCACTCCAACCTCCGAAGATAAAACCACCGTTGCACCCCTTGTTGC
GGCCCAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGTTGTGCGAGCAGACCCAAGGGCATCGATCTCAACCCAACCGAGGTTCCCGCCACACCTAAAAACAAGGCCGAGCCTGAAATCGTTGGAGGTGAGAGCCAAAA
AGAGGATGCATCGCCACCCTTGCTGGACCTGTCTGACCAACCAAAACAGGAAGCTCCTGCCGGTGGACATTCTGATTCGACCTCTGCACCATCCAAGCCTGCTGAACCAG
AACCAGTATCAGTACCAGTACCAGAGCCTGCCCAAGCCCATGTACCTGATTTGACTTCCCAGCTTACCACGCAGGCCGAGAAAGTGGAAGCCATTGCCAAGGAATTAGAG
GACAAGACTGAGGCTACTGTCCAAACCCAGACCAAGGACAAAGAGGGCCACCTCAAATCAGATCTCACTCCAACCTCCGAAGATAAAACCACCGTTGCACCCCTTGTTGC
GGCCCAA
Protein sequenceShow/hide protein sequence
MGGCASRPKGIDLNPTEVPATPKNKAEPEIVGGESQKEDASPPLLDLSDQPKQEAPAGGHSDSTSAPSKPAEPEPVSVPVPEPAQAHVPDLTSQLTTQAEKVEAIAKELE
DKTEATVQTQTKDKEGHLKSDLTPTSEDKTTVAPLVAAQ