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MS009719 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009719
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionHeavy metal transport/detoxification superfamily protein
Genome locationscaffold411:130271..130739
RNA-Seq ExpressionMS009719
SyntenyMS009719
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574268.1 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. sororia]2.1e-3768.99Show/hide
Query:  MAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQEADNSGPVVP
        MA L IVPA     ++VEPQLVEMMVPLYSHGCANK+HKALSHLKGIYSVNVD  +QKVTVWGICNK QVLSTVRSKRKAARFWN+  + E +N+     
Subjt:  MAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQEADNSGPVVP

Query:  PPAPPLSFRPRFAV---RSLSLKLACKKV
              S RP F V   RSLS KLACKKV
Subjt:  PPAPPLSFRPRFAV---RSLSLKLACKKV

KAG7013336.1 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-3769.77Show/hide
Query:  MAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQEADNSGPVVP
        MA L IVPA T   ++VEPQLVEMMVPLYSHGCANK+HKALSHLKGIYSVNVD  +QKVTVWGICNK QVLSTVRSKRKAARFWN+  + + +N+ P   
Subjt:  MAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQEADNSGPVVP

Query:  PPAPPLSFRPRFAV---RSLSLKLACKKV
              S RP F V   RSLS KLACKKV
Subjt:  PPAPPLSFRPRFAV---RSLSLKLACKKV

XP_022141204.1 uncharacterized protein LOC111011661 [Momordica charantia]5.2e-68100Show/hide
Query:  MHMAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQEADNSGPV
        MHMAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQEADNSGPV
Subjt:  MHMAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQEADNSGPV

Query:  VPPPAPPLSFRPRFAVRSLSLKLACKKV
        VPPPAPPLSFRPRFAVRSLSLKLACKKV
Subjt:  VPPPAPPLSFRPRFAVRSLSLKLACKKV

XP_022968373.1 heavy metal-associated isoprenylated plant protein 28 [Cucurbita maxima]6.2e-3768.7Show/hide
Query:  MAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQEADNSGPVVP
        MA L IVPA T   ++VEPQLVEMMVPLYSHGCANK+HKALSHLKGIYSVNVD ++QKVTVWGICNK QVLSTVRSKRKAARFWN + +   +N+    P
Subjt:  MAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQEADNSGPVVP

Query:  PPAPP--LSFRPRFAV---RSLSLKLACKKV
                S RP F V   RSLS KLACKKV
Subjt:  PPAPP--LSFRPRFAV---RSLSLKLACKKV

XP_023542922.1 heavy metal-associated isoprenylated plant protein 36 [Cucurbita pepo subsp. pepo]8.0e-3769.77Show/hide
Query:  MAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQEADNSGPVVP
        MA L IVPA T   ++VEPQLVEMMVPLYSHGCANK+HKALSHLKGIYSVNVD ++QKVTVWGICNK QVLSTVRSKRKAARFWN  T+ + +N+     
Subjt:  MAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQEADNSGPVVP

Query:  PPAPPLSFRPRFAV---RSLSLKLACKKV
              S RP F V   RSLS KLACKKV
Subjt:  PPAPPLSFRPRFAV---RSLSLKLACKKV

TrEMBL top hitse value%identityAlignment
A0A3Q7FME6 HMA domain-containing protein1.1e-3159.26Show/hide
Query:  MAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWN-----HETEQEADNS
        MA + IVPA    + NVEPQ VEMMVPLYS+GC  K++ ALSH+KGIYSVNVD  QQKVT+WGICNKY VL+ VRSKRKAARFWN      E+E+++ +S
Subjt:  MAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWN-----HETEQEADNS

Query:  GPV-----VPPPAPPLSFRPRFAVRSLSLKLACKK
         P      + P A PL+       RSLSLKLA KK
Subjt:  GPV-----VPPPAPPLSFRPRFAVRSLSLKLACKK

A0A5B6YNQ7 Putative Heavy metal transport/detoxification superfamily protein2.2e-3265.29Show/hide
Query:  MAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQEADNSGPVVP
        MA L IVPA    S NVE Q VEM VPLYS+GC NKV KAL+HLKGIYSVNVD NQQKVTVWGICNKY VL+T+R+KRK  RFWN E  +E D   P +P
Subjt:  MAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQEADNSGPVVP

Query:  PPA--PPLSFRPRFAVRSLSL
         P+  PP   RP+F V S SL
Subjt:  PPA--PPLSFRPRFAVRSLSL

A0A6J1CHX5 uncharacterized protein LOC1110116612.5e-68100Show/hide
Query:  MHMAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQEADNSGPV
        MHMAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQEADNSGPV
Subjt:  MHMAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQEADNSGPV

Query:  VPPPAPPLSFRPRFAVRSLSLKLACKKV
        VPPPAPPLSFRPRFAVRSLSLKLACKKV
Subjt:  VPPPAPPLSFRPRFAVRSLSLKLACKKV

A0A6J1G1N8 protein SODIUM POTASSIUM ROOT DEFECTIVE 26.6e-3769.77Show/hide
Query:  MAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQEADNSGPVVP
        MA L IVPA T   ++VEPQLVEMMVPLYSHGCANK+HKALSHLKGIYSVNVD  +QKVTVWGICNK QVLSTVRSKRKAARFWN++ + + +N+ P   
Subjt:  MAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQEADNSGPVVP

Query:  PPAPPLSFRPRFAV---RSLSLKLACKKV
              S RP F V   RSLS KLACKKV
Subjt:  PPAPPLSFRPRFAV---RSLSLKLACKKV

A0A6J1HXU2 heavy metal-associated isoprenylated plant protein 283.0e-3768.7Show/hide
Query:  MAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQEADNSGPVVP
        MA L IVPA T   ++VEPQLVEMMVPLYSHGCANK+HKALSHLKGIYSVNVD ++QKVTVWGICNK QVLSTVRSKRKAARFWN + +   +N+    P
Subjt:  MAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQEADNSGPVVP

Query:  PPAPP--LSFRPRFAV---RSLSLKLACKKV
                S RP F V   RSLS KLACKKV
Subjt:  PPAPP--LSFRPRFAV---RSLSLKLACKKV

SwissProt top hitse value%identityAlignment
B3H6D0 Heavy metal-associated isoprenylated plant protein 456.9e-0737.5Show/hide
Query:  LVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFW
        +VE++V +   GC  KV +A+S L G+ +V +D ++QKVTV G  ++ +VL  V+   + A +W
Subjt:  LVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFW

F4IC29 Heavy metal-associated isoprenylated plant protein 284.5e-0636.76Show/hide
Query:  VEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFW
        ++ Q +EM V +   GC ++V  AL  ++G+ +V +D  QQKVTV G  ++ +VL  VR   + A  W
Subjt:  VEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFW

O65657 Heavy metal-associated isoprenylated plant protein 232.2e-0538.46Show/hide
Query:  QLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFW
        Q VE+ V +   GC  K+  +LS LKG+ +V ++  QQKVTV G  +  +VL   ++  K A  W
Subjt:  QLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFW

Q8LDS4 Protein SODIUM POTASSIUM ROOT DEFECTIVE 16.9e-0747.69Show/hide
Query:  QLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFW
        Q+V + V L+  GCA KV K LS LKG+ S N+D   +KVTV G      VL+++ SK K A+FW
Subjt:  QLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFW

Q9LP41 Heavy metal-associated isoprenylated plant protein 291.7e-0542.86Show/hide
Query:  MMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRK
        M VP+   GC NKV KAL  + G++ V +D  QQ+VTV G   + +VL   R+  K
Subjt:  MMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRK

Arabidopsis top hitse value%identityAlignment
AT3G56891.1 Heavy metal transport/detoxification superfamily protein4.9e-0837.5Show/hide
Query:  LVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFW
        +VE++V +   GC  KV +A+S L G+ +V +D ++QKVTV G  ++ +VL  V+   + A +W
Subjt:  LVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFW

AT4G27590.1 Heavy metal transport/detoxification superfamily protein1.5e-2565.93Show/hide
Query:  MAKLHIVPADTRYSYN-VEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQ
        M  L IVP      YN VE Q VEMMVPLYS+GC  KV +ALSHLKGIYSV VD   QKVTVWGICNK  VL+ V+ KRK ARFWN E E+
Subjt:  MAKLHIVPADTRYSYN-VEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQ

AT4G27590.2 Heavy metal transport/detoxification superfamily protein1.5e-2565.93Show/hide
Query:  MAKLHIVPADTRYSYN-VEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQ
        M  L IVP      YN VE Q VEMMVPLYS+GC  KV +ALSHLKGIYSV VD   QKVTVWGICNK  VL+ V+ KRK ARFWN E E+
Subjt:  MAKLHIVPADTRYSYN-VEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQ

AT5G02600.1 Heavy metal transport/detoxification superfamily protein4.9e-0847.69Show/hide
Query:  QLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFW
        Q+V + V L+  GCA KV K LS LKG+ S N+D   +KVTV G      VL+++ SK K A+FW
Subjt:  QLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFW

AT5G02600.2 Heavy metal transport/detoxification superfamily protein4.9e-0847.69Show/hide
Query:  QLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFW
        Q+V + V L+  GCA KV K LS LKG+ S N+D   +KVTV G      VL+++ SK K A+FW
Subjt:  QLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATATGGCTAAGTTGCACATAGTTCCAGCCGACACCAGATATTCATATAATGTGGAGCCGCAGTTGGTGGAGATGATGGTTCCCCTTTACTCTCACGGTTGCGCCAA
CAAGGTCCACAAGGCGCTCTCCCATCTCAAAGGGATATATTCAGTTAATGTGGATTGCAATCAGCAGAAAGTGACGGTGTGGGGAATATGCAACAAATACCAAGTGCTGA
GCACTGTGAGGAGCAAGAGAAAAGCGGCTCGGTTCTGGAACCACGAAACAGAACAAGAAGCTGACAACAGCGGCCCAGTAGTCCCTCCTCCAGCTCCTCCTCTGAGCTTC
AGGCCTCGTTTTGCCGTTCGTTCCCTTAGCTTGAAACTAGCGTGCAAGAAGGTC
mRNA sequenceShow/hide mRNA sequence
ATGCATATGGCTAAGTTGCACATAGTTCCAGCCGACACCAGATATTCATATAATGTGGAGCCGCAGTTGGTGGAGATGATGGTTCCCCTTTACTCTCACGGTTGCGCCAA
CAAGGTCCACAAGGCGCTCTCCCATCTCAAAGGGATATATTCAGTTAATGTGGATTGCAATCAGCAGAAAGTGACGGTGTGGGGAATATGCAACAAATACCAAGTGCTGA
GCACTGTGAGGAGCAAGAGAAAAGCGGCTCGGTTCTGGAACCACGAAACAGAACAAGAAGCTGACAACAGCGGCCCAGTAGTCCCTCCTCCAGCTCCTCCTCTGAGCTTC
AGGCCTCGTTTTGCCGTTCGTTCCCTTAGCTTGAAACTAGCGTGCAAGAAGGTC
Protein sequenceShow/hide protein sequence
MHMAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVTVWGICNKYQVLSTVRSKRKAARFWNHETEQEADNSGPVVPPPAPPLSF
RPRFAVRSLSLKLACKKV