; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS009721 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009721
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSarcosine dehydrogenase-2C mitochondrial
Genome locationscaffold411:137589..138195
RNA-Seq ExpressionMS009721
SyntenyMS009721
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576620.1 hypothetical protein SDJN03_24194, partial [Cucurbita argyrosperma subsp. sororia]2.9e-4063.49Show/hide
Query:  KGREREMINGRMQVGEHDSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS-KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQ
        K R     + RMQ  E D PLR +LCVKN+  +DLKRFD  E+CY+LDFDPFHS + ++S  D+DS++S+V EKGQVACRDYPHARYLC+ FPF TTPHQ
Subjt:  KGREREMINGRMQVGEHDSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS-KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQ

Query:  SCCTMCFCYVCDSRAPCDHWSFHCSA
        + C MC+CYVCD+ APCDHW+ HC A
Subjt:  SCCTMCFCYVCDSRAPCDHWSFHCSA

XP_022140919.1 uncharacterized protein LOC111011466 [Momordica charantia]2.2e-8099.29Show/hide
Query:  KVKGREREMINGRMQVGEHDSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPDPSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQS
        KVKGREREMINGRMQVGEH SPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPDPSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQS
Subjt:  KVKGREREMINGRMQVGEHDSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPDPSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQS

Query:  CCTMCFCYVCDSRAPCDHWSFHCSASHTNPLWEYSRHYYNN
        CCTMCFCYVCDSRAPCDHWSFHCSASHTNPLWEYSRHYYNN
Subjt:  CCTMCFCYVCDSRAPCDHWSFHCSASHTNPLWEYSRHYYNN

XP_022922610.1 uncharacterized protein LOC111430566 [Cucurbita moschata]1.3e-4063.28Show/hide
Query:  KGREREMINGRMQVGEHDSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS---KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTP
        K R     + RMQ  E D PLR +LCVKN+  +DLKRFD  E+CY+LDFDPFHS + ++S    D+DS++S+V EKGQVACRDYPHARYLC+KFPF TTP
Subjt:  KGREREMINGRMQVGEHDSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS---KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTP

Query:  HQSCCTMCFCYVCDSRAPCDHWSFHCSA
        HQ+ C MC+CYVCD+ APCDHW+ HC A
Subjt:  HQSCCTMCFCYVCDSRAPCDHWSFHCSA

XP_022984372.1 uncharacterized protein LOC111482692 [Cucurbita maxima]6.6e-4058.45Show/hide
Query:  KGREREMINGRMQVGEHDSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS-KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQ
        K R     + RMQ  E + PLR ILCVKN+  +DLKRFD  + CY+LDFDPFHS + ++S  D+DS++S+V EKGQVACRDYPHARYLC+K PF TTPHQ
Subjt:  KGREREMINGRMQVGEHDSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS-KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQ

Query:  SCCTMCFCYVCDSRAPCDHWSFHCSASHTNPLWEYSRHYYNN
        + C MC+CYVCD+ APCDHW+ HC   H + LW+  R   +N
Subjt:  SCCTMCFCYVCDSRAPCDHWSFHCSASHTNPLWEYSRHYYNN

XP_023552151.1 uncharacterized protein LOC111809913 [Cucurbita pepo subsp. pepo]2.9e-4058.33Show/hide
Query:  KGREREMINGRMQVGEHDSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS---KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTP
        K R     + RMQ  E D PLR ILCVKN   +DLKRFD  E+CY+LDF+PFHS + ++S    D+DS++S+V EKGQVACRDYPHARYLC+KFPF TTP
Subjt:  KGREREMINGRMQVGEHDSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS---KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTP

Query:  HQSCCTMCFCYVCDSRAPCDHWSFHCSASHTNPLWEYSRHYYNN
        HQ+ C MC+CYVCD+ APCDHW+ HC   H +  W+  R   +N
Subjt:  HQSCCTMCFCYVCDSRAPCDHWSFHCSASHTNPLWEYSRHYYNN

TrEMBL top hitse value%identityAlignment
A0A0D2S4P4 Uncharacterized protein1.2e-3655.28Show/hide
Query:  EHDSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPD----PSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSR
        +H SPLRSI C+K +VD+KR +E EDC++LDF+PF+S D     +++   +++LS+V EKGQVACRDYPH+R+LC++FPFDTTPH   C +C+CYVCDS 
Subjt:  EHDSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPD----PSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSR

Query:  APCDHWSFHCSASHTNPLWEYSR
        APC+ W  HC AS     W+  R
Subjt:  APCDHWSFHCSASHTNPLWEYSR

A0A5D2IHZ9 Uncharacterized protein1.2e-3655.28Show/hide
Query:  EHDSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPD----PSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSR
        +H SPLRSI C+K +VD+KR +E EDC++LDF+PF+S D     +++   +++LS+V EKGQVACRDYPH+R+LC++FPFDTTPH   C +C+CYVCDS 
Subjt:  EHDSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPD----PSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSR

Query:  APCDHWSFHCSASHTNPLWEYSR
        APC+ W  HC AS     W+  R
Subjt:  APCDHWSFHCSASHTNPLWEYSR

A0A6J1CH43 uncharacterized protein LOC1110114661.1e-8099.29Show/hide
Query:  KVKGREREMINGRMQVGEHDSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPDPSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQS
        KVKGREREMINGRMQVGEH SPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPDPSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQS
Subjt:  KVKGREREMINGRMQVGEHDSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPDPSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQS

Query:  CCTMCFCYVCDSRAPCDHWSFHCSASHTNPLWEYSRHYYNN
        CCTMCFCYVCDSRAPCDHWSFHCSASHTNPLWEYSRHYYNN
Subjt:  CCTMCFCYVCDSRAPCDHWSFHCSASHTNPLWEYSRHYYNN

A0A6J1E9A2 uncharacterized protein LOC1114305666.4e-4163.28Show/hide
Query:  KGREREMINGRMQVGEHDSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS---KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTP
        K R     + RMQ  E D PLR +LCVKN+  +DLKRFD  E+CY+LDFDPFHS + ++S    D+DS++S+V EKGQVACRDYPHARYLC+KFPF TTP
Subjt:  KGREREMINGRMQVGEHDSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS---KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTP

Query:  HQSCCTMCFCYVCDSRAPCDHWSFHCSA
        HQ+ C MC+CYVCD+ APCDHW+ HC A
Subjt:  HQSCCTMCFCYVCDSRAPCDHWSFHCSA

A0A6J1J202 uncharacterized protein LOC1114826923.2e-4058.45Show/hide
Query:  KGREREMINGRMQVGEHDSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS-KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQ
        K R     + RMQ  E + PLR ILCVKN+  +DLKRFD  + CY+LDFDPFHS + ++S  D+DS++S+V EKGQVACRDYPHARYLC+K PF TTPHQ
Subjt:  KGREREMINGRMQVGEHDSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS-KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQ

Query:  SCCTMCFCYVCDSRAPCDHWSFHCSASHTNPLWEYSRHYYNN
        + C MC+CYVCD+ APCDHW+ HC   H + LW+  R   +N
Subjt:  SCCTMCFCYVCDSRAPCDHWSFHCSASHTNPLWEYSRHYYNN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G20310.1 RPM1 interacting protein 132.7e-2340.74Show/hide
Query:  DEREDCYVLDFDPFHSPD-PSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSRAPCDHWSF------HCSASHTNPL
        ++ +DC +LD DP  + +  S+  D D ++ +VG+KG++ACRD+PH R+ C K+ F++T H+  C MC CYVCD RAPC +W        HC A+    +
Subjt:  DEREDCYVLDFDPFHSPD-PSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSRAPCDHWSF------HCSASHTNPL

Query:  WEYSRHYY
        W+  R Y+
Subjt:  WEYSRHYY

AT4G27660.1 unknown protein7.0e-3245.03Show/hide
Query:  KVKGREREMINGRMQVGEHDSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPD-----PSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDT
        K K + R+ ++   +  E  +PLR I C+K   D+K F+E+EDC++LDFDP  S D      S + + D +++IV EKGQVACRD+PH R+LC+KFPF++
Subjt:  KVKGREREMINGRMQVGEHDSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPD-----PSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDT

Query:  TPHQSCCTMCFCYVCDSRAPCDHW--SF---HCSASHTNPLWEYSRHYYNN
        + H S C  C+CYVCD  APC +W  SF   HC A   N  W+  R  Y +
Subjt:  TPHQSCCTMCFCYVCDSRAPCDHW--SF---HCSASHTNPLWEYSRHYYNN

AT4G28690.1 BEST Arabidopsis thaliana protein match is: RPM1 interacting protein 13 (TAIR:AT2G20310.1)5.4e-2439.84Show/hide
Query:  VGEHDSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPDPSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSRAP
        V +   P++  + +   V+ +  D+ +DC +LDFDP        + +TD  L +VG+KG+VACRD+PH R+ C K+PF +T HQ+ C MC CYVCD+RAP
Subjt:  VGEHDSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPDPSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSRAP

Query:  CDHW-------SFHCSASHTNPLWEYSR
        C +W       + HC A+     W   R
Subjt:  CDHW-------SFHCSASHTNPLWEYSR

AT5G54148.1 unknown protein1.4e-2444.26Show/hide
Query:  EHDSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPDPSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSRAPCD
        E D+PL  I C+K   D+KRF+E EDC++LDFDPF S D      TD               DYPH R+ C+ FPF +TP+ S C +C+CYVCD  APC 
Subjt:  EHDSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPDPSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSRAPCD

Query:  HWSF---HCSASHTNPLWEYSR
         W+    HC+A + + LW   R
Subjt:  HWSF---HCSASHTNPLWEYSR

AT5G54150.1 unknown protein5.9e-3149.62Show/hide
Query:  EHDSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPD-PSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSRAPC
        E  SPLR ILCVK   D+KRF++ EDC++LDF+PF S D   +S   D +L I+ E GQVACRDYPH R+LC+ FPF +T + + C +C+C+VCD  APC
Subjt:  EHDSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPD-PSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSRAPC

Query:  DHW-SFHCSAS-----HTNPLWEYSRHYYNN
          W S HC+AS       +P  E   +YY++
Subjt:  DHW-SFHCSAS-----HTNPLWEYSRHYYNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAGTGAAAGGGCGAGAGAGAGAGATGATAAATGGTAGAATGCAAGTAGGGGAGCATGATTCCCCCCTCCGATCTATTTTGTGCGTAAAAAATGTCGTGGATTTGAAGCG
TTTCGACGAGAGGGAGGATTGTTACGTGTTAGACTTTGACCCCTTCCACTCCCCCGACCCCTCAATTTCCAAGGACACTGACTCTGAACTTTCCATTGTGGGGGAGAAGG
GTCAGGTGGCCTGTAGAGACTACCCACACGCTAGGTATTTGTGTGTCAAATTCCCCTTCGACACAACCCCTCACCAGAGTTGCTGCACGATGTGTTTCTGTTACGTGTGT
GATTCGAGAGCACCATGCGACCACTGGTCGTTCCATTGCAGTGCTTCGCATACCAATCCACTCTGGGAATACTCAAGGCACTACTACAACAAC
mRNA sequenceShow/hide mRNA sequence
AAAGTGAAAGGGCGAGAGAGAGAGATGATAAATGGTAGAATGCAAGTAGGGGAGCATGATTCCCCCCTCCGATCTATTTTGTGCGTAAAAAATGTCGTGGATTTGAAGCG
TTTCGACGAGAGGGAGGATTGTTACGTGTTAGACTTTGACCCCTTCCACTCCCCCGACCCCTCAATTTCCAAGGACACTGACTCTGAACTTTCCATTGTGGGGGAGAAGG
GTCAGGTGGCCTGTAGAGACTACCCACACGCTAGGTATTTGTGTGTCAAATTCCCCTTCGACACAACCCCTCACCAGAGTTGCTGCACGATGTGTTTCTGTTACGTGTGT
GATTCGAGAGCACCATGCGACCACTGGTCGTTCCATTGCAGTGCTTCGCATACCAATCCACTCTGGGAATACTCAAGGCACTACTACAACAAC
Protein sequenceShow/hide protein sequence
KVKGREREMINGRMQVGEHDSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPDPSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVC
DSRAPCDHWSFHCSASHTNPLWEYSRHYYNN