; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS009725 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009725
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionribosome-binding factor PSRP1, chloroplastic
Genome locationscaffold411:155337..162395
RNA-Seq ExpressionMS009725
SyntenyMS009725
Gene Ontology termsGO:0045900 - negative regulation of translational elongation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0043022 - ribosome binding (molecular function)
GO:0043024 - ribosomal small subunit binding (molecular function)
InterPro domainsIPR003489 - Ribosome hibernation promoting factor/RaiA
IPR032528 - Sigma 54 modulation/S30EA ribosomal protein, C-terminal
IPR034694 - Ribosome hibernation promoting factor, long/plastid
IPR036567 - Ribosome hibernation promotion factor-like
IPR038416 - Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014676.1 Ribosome-binding factor PSRP1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-13985.14Show/hide
Query:  MATLTSSMHTNLLSA-----------PSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSS
        MA LTSSM TNLLSA            SSSSST STFP SFSL TSTNS+ LK H LSSH S FFNSCN CF TI +APR RHA  SF+IRMSWDGPLSS
Subjt:  MATLTSSMHTNLLSA-----------PSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSS

Query:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEK
        VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVR EEDAETVYASIDLVSSI+QRKLRKIKEK
Subjt:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEK

Query:  DSDRGRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK
        DSD GRHMKGFDR K+R+PAPIVVED  EEEEVS ED GE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK
Subjt:  DSDRGRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK

Query:  ENGRAEKLEPVTVEPAREPSLAE
        E+G AEK+E VTVE ARE SLAE
Subjt:  ENGRAEKLEPVTVEPAREPSLAE

XP_022141073.1 ribosome-binding factor PSRP1, chloroplastic [Momordica charantia]6.5e-16599.68Show/hide
Query:  MATLTSSMHTNLLSAPSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLEL
        MATLTSSMHTNLLSAP SSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLEL
Subjt:  MATLTSSMHTNLLSAPSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLEL

Query:  TEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFD
        TEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFD
Subjt:  TEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFD

Query:  RLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLEPVT
        RLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLEPVT
Subjt:  RLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLEPVT

Query:  VEPAREPSLAE
        VEPAREPSLAE
Subjt:  VEPAREPSLAE

XP_022922607.1 ribosome-binding factor PSRP1, chloroplastic [Cucurbita moschata]3.2e-14086.52Show/hide
Query:  MATLTSSMHTNLLSA-------PSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLI
        MA LTSSM TNLLSA        SSSSST STFP SFSL TSTNS+ LK H LSSH S FFNSCN CF TI +APR RHA  SF+IRMSWDGPLSSVKLI
Subjt:  MATLTSSMHTNLLSA-------PSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLI

Query:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDR
        VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVR EEDAETVYASIDLVSSI+QRKLRKIKEKDSD 
Subjt:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDR

Query:  GRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGR
        GRHMKGFDR K+REPAPIVVED  EEEEVS ED GE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G 
Subjt:  GRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGR

Query:  AEKLEPVTVEPAREPSLAE
        AEK+E VTVE ARE SLAE
Subjt:  AEKLEPVTVEPAREPSLAE

XP_022984371.1 ribosome-binding factor PSRP1, chloroplastic [Cucurbita maxima]3.0e-13889.3Show/hide
Query:  SAPSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKV
        S+ SSSSST STFP SFSL TSTNS+ LKIH LSSH S FFNSCN CF TI IAPR RHA  SF+IRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKV
Subjt:  SAPSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKV

Query:  GKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVV
        GKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVR EEDAETVYASIDLVSSI+QRKLRKIKEKDSD GRHMKGFDR K+REPAPIVV
Subjt:  GKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVV

Query:  EDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLEPVTVEPAREPSLAE
        ED  EEEEVS ED GE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEK+E VTVE ARE SLAE
Subjt:  EDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLEPVTVEPAREPSLAE

XP_023551717.1 ribosome-binding factor PSRP1, chloroplastic [Cucurbita pepo subsp. pepo]8.5e-14187.38Show/hide
Query:  MATLTSSMHTNLLSA-----PSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQ
        MA LTSSM TNLLSA      SSSS+T STFP SFSL TSTNS+ LKIH LSSH S FFNSCN CF TI IAPR RHA  SF+IRMSWDGPLSSVKLIVQ
Subjt:  MATLTSSMHTNLLSA-----PSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQ

Query:  GKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGR
        GKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVR EEDAETVYASIDLVSSI+QRKLRKIKEKDSD GR
Subjt:  GKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGR

Query:  HMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAE
        HMKGFDR K+REPAPIVVED  EEEEVS ED GE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G AE
Subjt:  HMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAE

Query:  KLEPVTVEPAREPSLAE
        K+E VTVE ARE SLAE
Subjt:  KLEPVTVEPAREPSLAE

TrEMBL top hitse value%identityAlignment
A0A1S3CCT7 ribosome-binding factor PSRP1, chloroplastic2.0e-13585.44Show/hide
Query:  MATLTSSMHTNLLS-----APSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQG
        MATLTSSM  NLLS      P  SSST S FPA FSL    + SALK+H LSS+ S FFNSC  F TI+ A RNRHA+NSF+IRM+WDG LSSVKLIVQG
Subjt:  MATLTSSMHTNLLS-----APSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQG

Query:  KNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRH
        KNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVR EEDAETV+ASIDLVSSIIQRKLRKIKEKDSDRGRH
Subjt:  KNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRH

Query:  MKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEK
        +KGFDR KVREPAPIVVED  EEEEV  ED GEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEK
Subjt:  MKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEK

Query:  LEPVTVEPAREPSLAE
        LEPVTVE AREPSLAE
Subjt:  LEPVTVEPAREPSLAE

A0A5D3BQR1 Ribosome-binding factor PSRP12.0e-13585.44Show/hide
Query:  MATLTSSMHTNLLS-----APSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQG
        MATLTSSM  NLLS      P  SSST S FPA FSL    + SALK+H LSS+ S FFNSC  F TI+ A RNRHA+NSF+IRM+WDG LSSVKLIVQG
Subjt:  MATLTSSMHTNLLS-----APSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQG

Query:  KNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRH
        KNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVR EEDAETV+ASIDLVSSIIQRKLRKIKEKDSDRGRH
Subjt:  KNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRH

Query:  MKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEK
        +KGFDR KVREPAPIVVED  EEEEV  ED GEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEK
Subjt:  MKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEK

Query:  LEPVTVEPAREPSLAE
        LEPVTVE AREPSLAE
Subjt:  LEPVTVEPAREPSLAE

A0A6J1CJG5 ribosome-binding factor PSRP1, chloroplastic3.1e-16599.68Show/hide
Query:  MATLTSSMHTNLLSAPSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLEL
        MATLTSSMHTNLLSAP SSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLEL
Subjt:  MATLTSSMHTNLLSAPSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLEL

Query:  TEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFD
        TEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFD
Subjt:  TEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFD

Query:  RLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLEPVT
        RLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLEPVT
Subjt:  RLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLEPVT

Query:  VEPAREPSLAE
        VEPAREPSLAE
Subjt:  VEPAREPSLAE

A0A6J1E3S3 ribosome-binding factor PSRP1, chloroplastic1.6e-14086.52Show/hide
Query:  MATLTSSMHTNLLSA-------PSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLI
        MA LTSSM TNLLSA        SSSSST STFP SFSL TSTNS+ LK H LSSH S FFNSCN CF TI +APR RHA  SF+IRMSWDGPLSSVKLI
Subjt:  MATLTSSMHTNLLSA-------PSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLI

Query:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDR
        VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVR EEDAETVYASIDLVSSI+QRKLRKIKEKDSD 
Subjt:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDR

Query:  GRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGR
        GRHMKGFDR K+REPAPIVVED  EEEEVS ED GE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G 
Subjt:  GRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGR

Query:  AEKLEPVTVEPAREPSLAE
        AEK+E VTVE ARE SLAE
Subjt:  AEKLEPVTVEPAREPSLAE

A0A6J1J523 ribosome-binding factor PSRP1, chloroplastic1.5e-13889.3Show/hide
Query:  SAPSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKV
        S+ SSSSST STFP SFSL TSTNS+ LKIH LSSH S FFNSCN CF TI IAPR RHA  SF+IRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKV
Subjt:  SAPSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKV

Query:  GKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVV
        GKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVR EEDAETVYASIDLVSSI+QRKLRKIKEKDSD GRHMKGFDR K+REPAPIVV
Subjt:  GKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVV

Query:  EDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLEPVTVEPAREPSLAE
        ED  EEEEVS ED GE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEK+E VTVE ARE SLAE
Subjt:  EDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLEPVTVEPAREPSLAE

SwissProt top hitse value%identityAlignment
P19954 Ribosome-binding factor PSRP1, chloroplastic3.2e-9058.57Show/hide
Query:  MATLTSS---MHTNLLSAPSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKN
        MATL +S   M+ NL ++ S+S +  S         T TN S+L+        S F NSC+    + +            + MSWDGPLSSVKLI+QG+N
Subjt:  MATLTSS---MHTNLLSAPSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKN

Query:  LELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMK
        LE+++ V+ HVE+KVGK+V KHSHLVREVDVRLS RGG+  KGP++RRCEVTLFTK+HGV+R EEDAE++Y+SIDLVSSIIQRKLRKIK+K SD GRHMK
Subjt:  LELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMK

Query:  GFDRLKVREPAPIVVEDEEEEEE-------VSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKEN
        GF+R KVR+P P+ +  EE  EE       VS+ED  + I+E+VRTKYFDMPPLT+ EA+EQL+N+DHDFY FRNEETG+INILYKRK+GGYGLIIPK+ 
Subjt:  GFDRLKVREPAPIVVEDEEEEEE-------VSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKEN

Query:  GRAEKLEPVTVEPAREPSLAE
        G+ EKLE + V+  ++PS AE
Subjt:  GRAEKLEPVTVEPAREPSLAE

P47908 Ribosome hibernation promotion factor2.6e-3139.5Show/hide
Query:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEK
        +KL++QG N+ +TE++  +VE K+ KA +       +VDV LSV      +     + EVT++     V+R +E +E +YASIDLVS  I R+LRK KEK
Subjt:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEK

Query:  DSDRGRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK
        +  +  H        V+E    V+ ++   + +  + + E+  E+VR KYF MPP+T++EA+EQL+ +DHDFY F N++T  IN++Y R  GGYG+I P+
Subjt:  DSDRGRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK

P74518 Ribosome hibernation promotion factor1.5e-3443.14Show/hide
Query:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKI
        +KL++QG N+ +TEA+  +VEEKV +AV+   +L  +VDV LSV      +  RI    + EVT++     V+R +E +E +YASIDLV+  I R+LRK 
Subjt:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKI

Query:  KEKDSDRGRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI
        KE+  D     K    +K  E    +VED+  EE +  + + E+  E++R KYF MPP+ +E+A+EQL+ +DHDFY FRN++T EIN++Y R  GGYG+I
Subjt:  KEKDSDRGRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI

Query:  IPKE
         P +
Subjt:  IPKE

Q49VV1 Ribosome hibernation promotion factor2.3e-1932.5Show/hide
Query:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEK
        ++  + G+NL +T+A++ ++EEK+GK ++++ + V      + V+  +        + EVT+  KK   +R EE  + +YA IDL+++ ++R++RK K +
Subjt:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEK

Query:  DSDRGRH---MKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI
         + R R+    + F  L   + A  +  DE E +        E+  EI+R K F + P+  EEA+ Q+  + HDF+ F + ET   +I+YKRKDG YGLI
Subjt:  DSDRGRH---MKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI

Q9RVE7 Ribosome hibernation promotion factor4.5e-2032.99Show/hide
Query:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDR
        + G+N+E+TE ++++VEEK+ + + +++  + +  V L+VR  +     R  R EV L     G++R EE    +YA+ID  S +++R+LRK K      
Subjt:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDR

Query:  GRHMKGFDRLKVRE-PAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI
         R+MK     +    P P   E   +    +++D  E   EIVR K F++ P++ E+A+ Q++ + HDFY F++ + G+  ++Y+R+DG YGLI
Subjt:  GRHMKGFDRLKVRE-PAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI

Arabidopsis top hitse value%identityAlignment
AT5G24490.1 30S ribosomal protein, putative1.8e-9662.73Show/hide
Query:  MATLTSSMHTN-------LLSAPSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIV
        MATL     T        + + P SSSST      S   L  T+S  L+        S F          Q+  R+ +  +S  ++MSWDGPL+SVKLI+
Subjt:  MATLTSSMHTN-------LLSAPSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIV

Query:  QGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRG
        QGKNLEL+E +K+HVEEKVGK+VQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVR EEDAETVYA IDLVS+IIQRKLRKIKEKDSD G
Subjt:  QGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRG

Query:  RHMKGFDRLKVREPA-PIVVEDEEEEEEVSL---EDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE
        RHMKGF+RLKVREP    VVED E+  + S+   E+  ++I EIVRTK F+MPPLTV EA+EQL+ + HDFYGF+NEETGEINI+YKRK+GGYGLIIPK+
Subjt:  RHMKGFDRLKVREPA-PIVVEDEEEEEEVSL---EDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE

Query:  NGRAEKLEPVTVEPAREPSLAE
        +G+AEK+EP+  E   E S AE
Subjt:  NGRAEKLEPVTVEPAREPSLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTCTCACCTCTTCCATGCACACTAATCTCCTTTCCGCTCCTTCTTCTTCTTCTTCTACCTTTTCCACTTTCCCCGCTTCATTCTCTCTTCTCACTTCTACCAA
CTCCTCTGCCCTCAAAATCCACCCTCTTTCTTCCCATACTTCACCTTTCTTCAACTCCTGCAACTGCTTCACAACCATTCAGATTGCTCCCCGGAACCGCCATGCCGCAA
ACTCTTTCACTATTCGCATGTCCTGGGATGGCCCCCTCTCCTCTGTTAAATTAATTGTCCAAGGCAAGAATTTGGAGTTGACTGAAGCAGTTAAGAAGCATGTGGAAGAG
AAGGTTGGCAAGGCAGTTCAGAAGCACAGTCACTTAGTGAGAGAAGTAGATGTCAGGCTATCAGTTCGAGGTGGAGAGTTTGGGAAGGGTCCGAGGATTAGAAGATGCGA
GGTTACTTTATTCACGAAGAAGCATGGAGTTGTGCGTGGAGAGGAAGATGCTGAGACTGTCTATGCGAGCATTGATTTGGTATCTTCTATCATACAAAGGAAGTTGAGAA
AGATTAAAGAGAAAGATTCAGACCGTGGCCGACACATGAAAGGATTTGACAGATTGAAAGTAAGAGAACCTGCACCAATAGTTGTTGAAGATGAGGAAGAGGAAGAGGAA
GTTTCTCTGGAAGATAGTGGAGAAGTTATTGATGAGATCGTTCGGACAAAATACTTTGATATGCCTCCTTTGACTGTTGAAGAAGCAATCGAACAACTCAAAAATATTGA
CCATGATTTCTATGGTTTCCGGAACGAAGAAACTGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATCATCCCAAAAGAAAATGGCAGAGCTG
AGAAATTAGAGCCTGTGACAGTTGAGCCAGCCAGAGAACCTTCCTTGGCGGAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACTCTCACCTCTTCCATGCACACTAATCTCCTTTCCGCTCCTTCTTCTTCTTCTTCTACCTTTTCCACTTTCCCCGCTTCATTCTCTCTTCTCACTTCTACCAA
CTCCTCTGCCCTCAAAATCCACCCTCTTTCTTCCCATACTTCACCTTTCTTCAACTCCTGCAACTGCTTCACAACCATTCAGATTGCTCCCCGGAACCGCCATGCCGCAA
ACTCTTTCACTATTCGCATGTCCTGGGATGGCCCCCTCTCCTCTGTTAAATTAATTGTCCAAGGCAAGAATTTGGAGTTGACTGAAGCAGTTAAGAAGCATGTGGAAGAG
AAGGTTGGCAAGGCAGTTCAGAAGCACAGTCACTTAGTGAGAGAAGTAGATGTCAGGCTATCAGTTCGAGGTGGAGAGTTTGGGAAGGGTCCGAGGATTAGAAGATGCGA
GGTTACTTTATTCACGAAGAAGCATGGAGTTGTGCGTGGAGAGGAAGATGCTGAGACTGTCTATGCGAGCATTGATTTGGTATCTTCTATCATACAAAGGAAGTTGAGAA
AGATTAAAGAGAAAGATTCAGACCGTGGCCGACACATGAAAGGATTTGACAGATTGAAAGTAAGAGAACCTGCACCAATAGTTGTTGAAGATGAGGAAGAGGAAGAGGAA
GTTTCTCTGGAAGATAGTGGAGAAGTTATTGATGAGATCGTTCGGACAAAATACTTTGATATGCCTCCTTTGACTGTTGAAGAAGCAATCGAACAACTCAAAAATATTGA
CCATGATTTCTATGGTTTCCGGAACGAAGAAACTGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATCATCCCAAAAGAAAATGGCAGAGCTG
AGAAATTAGAGCCTGTGACAGTTGAGCCAGCCAGAGAACCTTCCTTGGCGGAA
Protein sequenceShow/hide protein sequence
MATLTSSMHTNLLSAPSSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEE
KVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEEEEEE
VSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLEPVTVEPAREPSLAE