CuGenDBv2

Gene ID	MS009727
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Rho GTPase-activating protein gacZ-like isoform X1
Genome location	scaffold411:168590..169324
RNA-Seq Expression	MS009727
Synteny	MS009727
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6576625.1 hypothetical protein SDJN03_24199, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-51

51.96

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Query:  MLCS---GGPNSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHN-------HNHNHNPNPCPDPDSFHSQDGDGDGDGDGDGDGDGNPNPAASSYLLITGI
        MLCS   G    NWLDRLRSNKGFPI D+L LDHFLT Q+L N       H+  H+  P P  DS  +     +         +GNP    SSY +ITGI
Subjt:  MLCS---GGPNSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHN-------HNHNHNPNPCPDPDSFHSQDGDGDGDGDGDGDGDGNPNPAASSYLLITGI

Query:  LSDLFNVTPPS---KCCAKKFPRKQPNPKLCPIIIPPN-----DPNQ--PQHLPNILSSNTSNSPE---------------PLEEQEAEDDETDRQLVGY
        LSDLFN+T  S   KC  KK PRKQ NPK+C +    N     D N    Q   NILSSN+ NS +                +EE+E ED++ +++L GY
Subjt:  LSDLFNVTPPS---KCCAKKFPRKQPNPKLCPIIIPPN-----DPNQ--PQHLPNILSSNTSNSPE---------------PLEEQEAEDDETDRQLVGY

Query:  SKTEVTVIDTSCDVWNSDKLIFRRNNVWKVKDKKAKSRSYGRKKRKLHSPQT--TDTTASANKKSKLWGSHERFHFTAQQL
        SK+EVTVIDTS DVW SDKLIFRR NVWKVKDKK K RSYGRKKRK  S     +D TASA+KK+KLWGS ERFHF A Q+
Subjt:  SKTEVTVIDTSCDVWNSDKLIFRRNNVWKVKDKKAKSRSYGRKKRKLHSPQT--TDTTASANKKSKLWGSHERFHFTAQQL

KAG7014678.1 hypothetical protein SDJN02_22307 [Cucurbita argyrosperma subsp. argyrosperma]

3.8e-51

51.6

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Query:  MLCS---GGPNSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHN-------HNHNHNPNPCPDPDSFHSQDGDGDGDGDGDGDGDGNPNPAASSYLLITGI
        MLCS   G    NWLDRLRSNKGFPI D+L LDHFLT Q+L N       H+  H+  P P  DS  +     +         +GNP    SSY +ITGI
Subjt:  MLCS---GGPNSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHN-------HNHNHNPNPCPDPDSFHSQDGDGDGDGDGDGDGDGNPNPAASSYLLITGI

Query:  LSDLFNVT---PPSKCCAKKFPRKQPNPKLCPIIIPPN-----DPNQ--PQHLPNILSSNTSNSPE---------------PLEEQEAEDDETDRQLVGY
        LSDLFN+T     SKC  KK PRKQ NPK+C +    N     D N    Q   NILSSN+ NS +                +EE+E ED++ +++L GY
Subjt:  LSDLFNVT---PPSKCCAKKFPRKQPNPKLCPIIIPPN-----DPNQ--PQHLPNILSSNTSNSPE---------------PLEEQEAEDDETDRQLVGY

Query:  SKTEVTVIDTSCDVWNSDKLIFRRNNVWKVKDKKAKSRSYGRKKRKLHSPQT--TDTTASANKKSKLWGSHERFHFTAQQL
        SK+EVTVIDTS DVW SDKLIFRR NVWKVKDKK K RSYGRKKRK  S     +D TASA+KK+K WGS ERFHF A Q+
Subjt:  SKTEVTVIDTSCDVWNSDKLIFRRNNVWKVKDKKAKSRSYGRKKRKLHSPQT--TDTTASANKKSKLWGSHERFHFTAQQL

XP_022141074.1 uncharacterized protein LOC111011562 [Momordica charantia]

9.4e-135

95.69

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Query:  MLCSGGPNSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHNHNHNHNPNPCPDPDSFHSQ----------DGDGDGDGDGDGDGDGNPNPAASSYLLITGI
        MLCSGGPNSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHNHN NHNPNPCPDPDSFHSQ          DGDGDGDGDGDGDGDGNPNPAASSYLLITGI
Subjt:  MLCSGGPNSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHNHNHNHNPNPCPDPDSFHSQ----------DGDGDGDGDGDGDGDGNPNPAASSYLLITGI

Query:  LSDLFNVTPPSKCCAKKFPRKQPNPKLCPIIIPPNDPNQPQHLPNILSSNTSNSPEPLEEQEAEDDETDRQLVGYSKTEVTVIDTSCDVWNSDKLIFRRN
        LSDLFNVTPPSKCCAKKFPRKQPNPKLCPIIIPPNDPNQPQHLPNILSSNTSNSPEPLEEQEAEDDETDRQLVGYSKTEVTVIDTSCDVWNSDKLIFRRN
Subjt:  LSDLFNVTPPSKCCAKKFPRKQPNPKLCPIIIPPNDPNQPQHLPNILSSNTSNSPEPLEEQEAEDDETDRQLVGYSKTEVTVIDTSCDVWNSDKLIFRRN

Query:  NVWKVKDKKAKSRSYGRKKRKLHSPQTTDTTASANKKSKLWGSHERFHFTAQQLH
        NVWKVKDKKAKSRSYGRKKRKLHSPQTTDTTASANKKSKLWGSHERFHFTAQQLH
Subjt:  NVWKVKDKKAKSRSYGRKKRKLHSPQTTDTTASANKKSKLWGSHERFHFTAQQLH

XP_023551713.1 uncharacterized protein LOC111809606 isoform X1 [Cucurbita pepo subsp. pepo]

3.8e-51

51.6

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Query:  MLCS---GGPNSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHN-------HNHNHNPNPCPDPDSFHSQDGDGDGDGDGDGDGDGNPNPAASSYLLITGI
        MLCS   G    NWLDRLRSNKGFPI D+L LDHFLT Q+L N       H+  H+  P P  DS  +     +         +GNP    SSY +ITGI
Subjt:  MLCS---GGPNSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHN-------HNHNHNPNPCPDPDSFHSQDGDGDGDGDGDGDGDGNPNPAASSYLLITGI

Query:  LSDLFNVT---PPSKCCAKKFPRKQPNPKLCPIIIPPN-----DPNQ--PQHLPNILSSNTSNSPE---------------PLEEQEAEDDETDRQLVGY
        LSDLFN+T     SKC  KK PRKQ NPK+C +    N     D N    Q   NILSSN+ NS +                +EE+E ED++ +++L GY
Subjt:  LSDLFNVT---PPSKCCAKKFPRKQPNPKLCPIIIPPN-----DPNQ--PQHLPNILSSNTSNSPE---------------PLEEQEAEDDETDRQLVGY

Query:  SKTEVTVIDTSCDVWNSDKLIFRRNNVWKVKDKKAKSRSYGRKKRKLHSPQT--TDTTASANKKSKLWGSHERFHFTAQQL
        SK+EVTVIDTS DVW SDKLIFRR NVWKVKDKK K RSYGRKKRK  S     +D TASA+KK+K WGS ERFHF A Q+
Subjt:  SKTEVTVIDTSCDVWNSDKLIFRRNNVWKVKDKKAKSRSYGRKKRKLHSPQT--TDTTASANKKSKLWGSHERFHFTAQQL

XP_023551715.1 uncharacterized protein LOC111809606 isoform X3 [Cucurbita pepo subsp. pepo]

3.8e-51

51.6

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Query:  MLCS---GGPNSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHN-------HNHNHNPNPCPDPDSFHSQDGDGDGDGDGDGDGDGNPNPAASSYLLITGI
        MLCS   G    NWLDRLRSNKGFPI D+L LDHFLT Q+L N       H+  H+  P P  DS  +     +         +GNP    SSY +ITGI
Subjt:  MLCS---GGPNSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHN-------HNHNHNPNPCPDPDSFHSQDGDGDGDGDGDGDGDGNPNPAASSYLLITGI

Query:  LSDLFNVT---PPSKCCAKKFPRKQPNPKLCPIIIPPN-----DPNQ--PQHLPNILSSNTSNSPE---------------PLEEQEAEDDETDRQLVGY
        LSDLFN+T     SKC  KK PRKQ NPK+C +    N     D N    Q   NILSSN+ NS +                +EE+E ED++ +++L GY
Subjt:  LSDLFNVT---PPSKCCAKKFPRKQPNPKLCPIIIPPN-----DPNQ--PQHLPNILSSNTSNSPE---------------PLEEQEAEDDETDRQLVGY

Query:  SKTEVTVIDTSCDVWNSDKLIFRRNNVWKVKDKKAKSRSYGRKKRKLHSPQT--TDTTASANKKSKLWGSHERFHFTAQQL
        SK+EVTVIDTS DVW SDKLIFRR NVWKVKDKK K RSYGRKKRK  S     +D TASA+KK+K WGS ERFHF A Q+
Subjt:  SKTEVTVIDTSCDVWNSDKLIFRRNNVWKVKDKKAKSRSYGRKKRKLHSPQT--TDTTASANKKSKLWGSHERFHFTAQQL

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DS96 uncharacterized protein LOC103482569

3.0e-46

49.09

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Query:  MLCS---GGPNSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHNHNHNHNPNPCPDPDSFHSQDGDGDGDGDGDGDGDGNPNPAASSYLLITGILSDLFNV
        MLCS   G    NWLDRLRSNKGFPI D+L LDHFLT Q+L N     + NP       HS         D         N   SS+ +IT ILSDLFN+
Subjt:  MLCS---GGPNSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHNHNHNHNPNPCPDPDSFHSQDGDGDGDGDGDGDGDGNPNPAASSYLLITGILSDLFNV

Query:  ---TPPSKCCAKKFPRKQPNPKLCPIIIPPN-DPNQPQHL------PNILSSNTSNSPE---------------PLEEQEAEDDETDRQLVGYSKTEVTV
           +  SKCC+KK+PRKQ NPK+C I    N D    ++L       NILSSN+ NS +                + E+E  D++ +++L GYSK+EVTV
Subjt:  ---TPPSKCCAKKFPRKQPNPKLCPIIIPPN-DPNQPQHL------PNILSSNTSNSPE---------------PLEEQEAEDDETDRQLVGYSKTEVTV

Query:  IDTSCDVWNSDKLIFRRNNVWKVKDKKAKSRSYGRKKRKLHSPQT--TDTTASANKKSKLWGSHERFHFTAQQLH
        IDTS DVW SDKLIFRR +VWKVKDKK K RSYGRKKRK  S      D   SA+KK+K+WGS ERFH   QQ+H
Subjt:  IDTSCDVWNSDKLIFRRNNVWKVKDKKAKSRSYGRKKRKLHSPQT--TDTTASANKKSKLWGSHERFHFTAQQLH

A0A6J1CHJ0 uncharacterized protein LOC111011562

4.5e-135

95.69

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Query:  MLCSGGPNSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHNHNHNHNPNPCPDPDSFHSQ----------DGDGDGDGDGDGDGDGNPNPAASSYLLITGI
        MLCSGGPNSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHNHN NHNPNPCPDPDSFHSQ          DGDGDGDGDGDGDGDGNPNPAASSYLLITGI
Subjt:  MLCSGGPNSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHNHNHNHNPNPCPDPDSFHSQ----------DGDGDGDGDGDGDGDGNPNPAASSYLLITGI

Query:  LSDLFNVTPPSKCCAKKFPRKQPNPKLCPIIIPPNDPNQPQHLPNILSSNTSNSPEPLEEQEAEDDETDRQLVGYSKTEVTVIDTSCDVWNSDKLIFRRN
        LSDLFNVTPPSKCCAKKFPRKQPNPKLCPIIIPPNDPNQPQHLPNILSSNTSNSPEPLEEQEAEDDETDRQLVGYSKTEVTVIDTSCDVWNSDKLIFRRN
Subjt:  LSDLFNVTPPSKCCAKKFPRKQPNPKLCPIIIPPNDPNQPQHLPNILSSNTSNSPEPLEEQEAEDDETDRQLVGYSKTEVTVIDTSCDVWNSDKLIFRRN

Query:  NVWKVKDKKAKSRSYGRKKRKLHSPQTTDTTASANKKSKLWGSHERFHFTAQQLH
        NVWKVKDKKAKSRSYGRKKRKLHSPQTTDTTASANKKSKLWGSHERFHFTAQQLH
Subjt:  NVWKVKDKKAKSRSYGRKKRKLHSPQTTDTTASANKKSKLWGSHERFHFTAQQLH

A0A6J1E4K6 uncharacterized protein LOC111430562 isoform X2

9.1e-51

51.25

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Query:  MLCS---GGPNSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHN-------HNHNHNPNPCPDPDSFHSQDGDGDGDGDGDGDGDGNPNPAASSYLLITGI
        MLCS   G    NWLDRLRSNKGFPI D+L LDHFLT Q+L N       H+  H+  P P  DS  +     +         +GNP    SSY +ITGI
Subjt:  MLCS---GGPNSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHN-------HNHNHNPNPCPDPDSFHSQDGDGDGDGDGDGDGDGNPNPAASSYLLITGI

Query:  LSDLFNVT---PPSKCCAKKFPRKQPNPKLCPIIIPPN-----DPNQ--PQHLPNILSSNTSNSPE---------------PLEEQEAEDDETDRQLVGY
        LSDLFN+T     SKC  KK PRKQ NPK+C +    N     D N    Q   NILSSN+ NS +                +EE+E ED++ +++L GY
Subjt:  LSDLFNVT---PPSKCCAKKFPRKQPNPKLCPIIIPPN-----DPNQ--PQHLPNILSSNTSNSPE---------------PLEEQEAEDDETDRQLVGY

Query:  SKTEVTVIDTSCDVWNSDKLIFRRNNVWKVKDKKAKSRSYGRKKRKLHSPQT--TDTTASANKKSKLWGSHERFHFTAQQL
        SK+EVTVIDTS DVW SDKLIFRR NVWKVKDKK K RSYGRKKRK  S     +D TASA+K +K WGS ERFHF A Q+
Subjt:  SKTEVTVIDTSCDVWNSDKLIFRRNNVWKVKDKKAKSRSYGRKKRKLHSPQT--TDTTASANKKSKLWGSHERFHFTAQQL

A0A6J1E997 uncharacterized protein LOC111430562 isoform X1

9.1e-51

51.25

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Query:  MLCS---GGPNSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHN-------HNHNHNPNPCPDPDSFHSQDGDGDGDGDGDGDGDGNPNPAASSYLLITGI
        MLCS   G    NWLDRLRSNKGFPI D+L LDHFLT Q+L N       H+  H+  P P  DS  +     +         +GNP    SSY +ITGI
Subjt:  MLCS---GGPNSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHN-------HNHNHNPNPCPDPDSFHSQDGDGDGDGDGDGDGDGNPNPAASSYLLITGI

Query:  LSDLFNVT---PPSKCCAKKFPRKQPNPKLCPIIIPPN-----DPNQ--PQHLPNILSSNTSNSPE---------------PLEEQEAEDDETDRQLVGY
        LSDLFN+T     SKC  KK PRKQ NPK+C +    N     D N    Q   NILSSN+ NS +                +EE+E ED++ +++L GY
Subjt:  LSDLFNVT---PPSKCCAKKFPRKQPNPKLCPIIIPPN-----DPNQ--PQHLPNILSSNTSNSPE---------------PLEEQEAEDDETDRQLVGY

Query:  SKTEVTVIDTSCDVWNSDKLIFRRNNVWKVKDKKAKSRSYGRKKRKLHSPQT--TDTTASANKKSKLWGSHERFHFTAQQL
        SK+EVTVIDTS DVW SDKLIFRR NVWKVKDKK K RSYGRKKRK  S     +D TASA+K +K WGS ERFHF A Q+
Subjt:  SKTEVTVIDTSCDVWNSDKLIFRRNNVWKVKDKKAKSRSYGRKKRKLHSPQT--TDTTASANKKSKLWGSHERFHFTAQQL

A0A6J1J8F5 uncharacterized protein LOC111482689

6.9e-51

51.25

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Query:  MLCS---GGPNSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHN-------HNHNHNPNPCPDPDSFHSQDGDGDGDGDGDGDGDGNPNPAASSYLLITGI
        MLCS   G    NWLDRLRSNKGFPI D+L LDHFLT Q+L N       H+  H+  P P  DS  +     +         +GNP    SSY +ITGI
Subjt:  MLCS---GGPNSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHN-------HNHNHNPNPCPDPDSFHSQDGDGDGDGDGDGDGDGNPNPAASSYLLITGI

Query:  LSDLFNVT---PPSKCCAKKFPRKQPNPKLCPIIIPPN-----DPNQ--PQHLPNILSSNTSNSPE---------------PLEEQEAEDDETDRQLVGY
        LSDLF++T     SKC  KK PRKQ NPK+C +    N     D N    Q   NILSSN+ NS +                +EE+E ED++ +++L GY
Subjt:  LSDLFNVT---PPSKCCAKKFPRKQPNPKLCPIIIPPN-----DPNQ--PQHLPNILSSNTSNSPE---------------PLEEQEAEDDETDRQLVGY

Query:  SKTEVTVIDTSCDVWNSDKLIFRRNNVWKVKDKKAKSRSYGRKKRKLHSPQT--TDTTASANKKSKLWGSHERFHFTAQQL
        SK+EVTVIDTS DVW SDKLIFRR NVWKVKDKK K RSYGRKKRK  S     +D TASA+KK+K WGS ERFHF A Q+
Subjt:  SKTEVTVIDTSCDVWNSDKLIFRRNNVWKVKDKKAKSRSYGRKKRKLHSPQT--TDTTASANKKSKLWGSHERFHFTAQQL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G24500.1 unknown protein

1.6e-15

31.68

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Query:  NSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHNHNHNHNPNPCPDPDSFHSQDGDGDGDGDGDGDGDGNPNPAASSYLLITGILSDLFNVTPPSKCCA--
        +S WL+RLR N+G    DD    + LT  D    NH H         S          D +        P P    Y +++ +L +LFN +  SK     
Subjt:  NSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHNHNHNHNPNPCPDPDSFHSQDGDGDGDGDGDGDGDGNPNPAASSYLLITGILSDLFNVTPPSKCCA--

Query:  --KKFPRKQPNPKLCPIIIPPN--------DPNQPQHLPNILSSNTSNS----------PEPLEEQ---------EAEDDETDRQLVGYSKTEVTVIDTS
          KK PRKQ NP+ C +  P +          +    LP++    TS+S          PE  E +         + E+++ ++ LVG+S++EVTVIDTS
Subjt:  --KKFPRKQPNPKLCPIIIPPN--------DPNQPQHLPNILSSNTSNS----------PEPLEEQ---------EAEDDETDRQLVGYSKTEVTVIDTS

Query:  CDVWNSDKLIFRRNNVWKVKDKKAKSRSYG---------RKKRKLHSPQTTDTTASANKKSK
          +W S+KL+FRR NVWKV++KK KSR            +KK++       D    A KKSK
Subjt:  CDVWNSDKLIFRRNNVWKVKDKKAKSRSYG---------RKKRKLHSPQTTDTTASANKKSK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCTTTGTTCGGGCGGTCCCAACTCCAACTGGCTGGACCGGCTCCGTTCAAACAAGGGTTTTCCGATCGGCGACGACCTTGGCCTCGATCACTTCCTCACTCGCCAAGA
CCTTCATAATCATAATCATAATCATAATCCCAATCCCTGCCCCGATCCCGATTCCTTTCACTCTCAAGATGGAGATGGAGATGGAGATGGAGATGGCGATGGCGATGGAG
ATGGAAACCCCAACCCAGCAGCATCATCGTACCTTCTCATTACCGGCATCCTCTCCGACCTCTTCAACGTCACTCCTCCCTCCAAATGCTGTGCCAAAAAGTTCCCCAGG
AAGCAGCCCAACCCCAAGCTTTGCCCCATTATTATTCCTCCTAATGATCCCAACCAACCACAACACTTACCCAACATCCTCTCATCCAATACTTCCAACTCACCCGAGCC
GCTTGAAGAGCAAGAGGCGGAGGATGATGAGACTGACAGACAACTTGTAGGATACTCCAAGACCGAGGTGACGGTCATAGATACTAGCTGCGACGTCTGGAACTCCGACA
AGCTCATTTTCAGAAGAAACAATGTCTGGAAGGTCAAGGACAAGAAGGCCAAGTCCAGGAGCTACGGAAGGAAGAAGCGCAAGCTGCACTCTCCTCAAACTACGGATACC
ACTGCTTCCGCTAATAAGAAATCCAAACTCTGGGGTTCTCACGAGCGCTTCCATTTCACCGCCCAGCAACTCCAC

mRNA sequence

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Protein sequence

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MLCSGGPNSNWLDRLRSNKGFPIGDDLGLDHFLTRQDLHNHNHNHNPNPCPDPDSFHSQDGDGDGDGDGDGDGDGNPNPAASSYLLITGILSDLFNVTPPSKCCAKKFPR
KQPNPKLCPIIIPPNDPNQPQHLPNILSSNTSNSPEPLEEQEAEDDETDRQLVGYSKTEVTVIDTSCDVWNSDKLIFRRNNVWKVKDKKAKSRSYGRKKRKLHSPQTTDT
TASANKKSKLWGSHERFHFTAQQLH

MS009727 (gene) of Bitter gourd (TR) v1 genome