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MS009728 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009728
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description60S acidic ribosomal protein P1-like
Genome locationscaffold411:170912..171586
RNA-Seq ExpressionMS009728
SyntenyMS009728
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0006414 - translational elongation (biological process)
GO:0032147 - activation of protein kinase activity (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0030295 - protein kinase activator activity (molecular function)
GO:0043021 - ribonucleoprotein complex binding (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574265.1 60S acidic ribosomal protein P1-1, partial [Cucurbita argyrosperma subsp. sororia]2.6e-4494.59Show/hide
Query:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE
        MSTSELACAYAA+AL+DDGIAITA+KIAAVVAAAGLCVESYWPSLFAKLAEKR+IGDLLLNVGCGGGAAA VSVAAPAGG AASAAAPAVEEKKEEPKEE
Subjt:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

XP_022140845.1 60S acidic ribosomal protein P1-like [Momordica charantia]7.9e-49100Show/hide
Query:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE
        MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE
Subjt:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

XP_022922611.1 60S acidic ribosomal protein P1 [Cucurbita moschata]4.1e-4593.69Show/hide
Query:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE
        MS+SELACAYAA+ALYDDGIAITA+KIAAVVAAAGLCVESYWPSLFAKLAEKR+IGDLLLNVGCGGGAAAPVSVAA A GA+ASAAAPAVEEKKEEPKEE
Subjt:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

XP_022984373.1 60S acidic ribosomal protein P1 [Cucurbita maxima]1.4e-4594.59Show/hide
Query:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE
        MS SELACAYAA+ALYDDGIAITA+KIAAVVAAAGLCVESYWPSLFAKLAEKR+IGDLLLNVGCGGGAAAPVSVAA AGGA+ASAAAPAVEEKKEEPKEE
Subjt:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

XP_023551718.1 60S acidic ribosomal protein P1 [Cucurbita pepo subsp. pepo]8.2e-4694.59Show/hide
Query:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE
        MS+SELACAYAA+ALYDDGIAITA+KIAAVVAAAGLCVESYWPSLFAKLAEKR+IGDLLLNVGCGGGAAAPVSVAA AGGA+ASAAAPAVEEKKEEPKEE
Subjt:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

TrEMBL top hitse value%identityAlignment
A0A6J1CGB2 60S acidic ribosomal protein P1-like3.8e-49100Show/hide
Query:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE
        MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE
Subjt:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

A0A6J1E4K8 60S acidic ribosomal protein P12.0e-4593.69Show/hide
Query:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE
        MS+SELACAYAA+ALYDDGIAITA+KIAAVVAAAGLCVESYWPSLFAKLAEKR+IGDLLLNVGCGGGAAAPVSVAA A GA+ASAAAPAVEEKKEEPKEE
Subjt:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

A0A6J1G2H4 60S acidic ribosomal protein P1-like1.3e-4494.59Show/hide
Query:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE
        MSTSELACAYAA+AL+DDGIAITA+KIAAVVAAAGLCVESYWPSLFAKLAEKR+IGDLLLNVGCGGGAAA VSVAAPAGG AASAAAPAVEEKKEEPKEE
Subjt:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

A0A6J1HYH2 60S acidic ribosomal protein P1-like1.1e-4392.79Show/hide
Query:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE
        MSTSEL CAYAA+AL+DDGIAITA+KIAAVVAAAGLCVESYWPSLFAKLAEKR+IGDLLLNVGCGGGAAA VSVAAPAGG AASAAAPAVEEK+EEPKEE
Subjt:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

A0A6J1JAB2 60S acidic ribosomal protein P16.8e-4694.59Show/hide
Query:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE
        MS SELACAYAA+ALYDDGIAITA+KIAAVVAAAGLCVESYWPSLFAKLAEKR+IGDLLLNVGCGGGAAAPVSVAA AGGA+ASAAAPAVEEKKEEPKEE
Subjt:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

SwissProt top hitse value%identityAlignment
O23095 60S acidic ribosomal protein P1-21.0e-3067.26Show/hide
Query:  MST-SELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGC-GGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPK
        MST  ELAC+YA M L D+GIAIT++KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG  GGG  APVS AAPA    A+AAAPA EEKK+EP 
Subjt:  MST-SELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGC-GGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD

P29763 60S acidic ribosomal protein P13.7e-2561.26Show/hide
Query:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE
        MSTSELAC YAA+ L+DDG+ ITA+ I  +  AAG+ VE YWP+LFAKL  K+++ DL+ NVG GGG AAP + A  AGGA A+ AAP  EEKKE  +EE
Subjt:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
           DMGFSLFD
Subjt:  SDDDMGFSLFD

P52855 60S acidic ribosomal protein P13.0e-3577.48Show/hide
Query:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE
        M++ ELAC YAA+ L DDGIAITAEKIA +V AA + VESYWP+LFAKL EKRN+ DL+L+VG GGG AAPV+ AAPAGGAAA AAAPAVEEKKEE KEE
Subjt:  MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

Q8LCW9 60S acidic ribosomal protein P1-13.5e-3166.07Show/hide
Query:  MST-SELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKE
        MST  ELAC+YA M L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG GGG  APV+ AAPA G  A+AA  A E+KK+EP E
Subjt:  MST-SELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

Q8LEQ0 60S acidic ribosomal protein P1-35.4e-3268.14Show/hide
Query:  MST-SELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEE-KKEEPK
        MST  ELAC+YA M L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG GGG  APV+ AAPA G  A+AAAPA EE KK+EP 
Subjt:  MST-SELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEE-KKEEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD

Arabidopsis top hitse value%identityAlignment
AT1G01100.1 60S acidic ribosomal protein family2.5e-3266.07Show/hide
Query:  MST-SELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKE
        MST  ELAC+YA M L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG GGG  APV+ AAPA G  A+AA  A E+KK+EP E
Subjt:  MST-SELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

AT1G01100.2 60S acidic ribosomal protein family2.5e-3266.07Show/hide
Query:  MST-SELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKE
        MST  ELAC+YA M L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG GGG  APV+ AAPA G  A+AA  A E+KK+EP E
Subjt:  MST-SELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

AT1G01100.4 60S acidic ribosomal protein family2.5e-3266.07Show/hide
Query:  MST-SELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKE
        MST  ELAC+YA M L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG GGG  APV+ AAPA G  A+AA  A E+KK+EP E
Subjt:  MST-SELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

AT5G47700.1 60S acidic ribosomal protein family3.8e-3368.14Show/hide
Query:  MST-SELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEE-KKEEPK
        MST  ELAC+YA M L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG GGG  APV+ AAPA G  A+AAAPA EE KK+EP 
Subjt:  MST-SELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEE-KKEEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD

AT5G47700.2 60S acidic ribosomal protein family3.8e-3368.14Show/hide
Query:  MST-SELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEE-KKEEPK
        MST  ELAC+YA M L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG GGG  APV+ AAPA G  A+AAAPA EE KK+EP 
Subjt:  MST-SELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEE-KKEEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACCAGTGAGCTTGCTTGCGCTTACGCCGCCATGGCTCTTTACGACGATGGAATTGCAATCACTGCGGAGAAGATTGCAGCCGTAGTTGCAGCCGCGGGGCTCTG
TGTGGAATCTTACTGGCCCAGCCTCTTTGCAAAGTTGGCGGAGAAGAGGAATATCGGCGACCTTCTTCTCAACGTTGGTTGTGGTGGTGGCGCTGCGGCTCCCGTGTCTG
TAGCCGCTCCTGCTGGTGGTGCTGCTGCCTCTGCCGCCGCTCCTGCCGTTGAGGAAAAGAAGGAAGAGCCGAAAGAGGAGAGCGATGACGACATGGGATTCAGCTTATTC
GAT
mRNA sequenceShow/hide mRNA sequence
ATGTCTACCAGTGAGCTTGCTTGCGCTTACGCCGCCATGGCTCTTTACGACGATGGAATTGCAATCACTGCGGAGAAGATTGCAGCCGTAGTTGCAGCCGCGGGGCTCTG
TGTGGAATCTTACTGGCCCAGCCTCTTTGCAAAGTTGGCGGAGAAGAGGAATATCGGCGACCTTCTTCTCAACGTTGGTTGTGGTGGTGGCGCTGCGGCTCCCGTGTCTG
TAGCCGCTCCTGCTGGTGGTGCTGCTGCCTCTGCCGCCGCTCCTGCCGTTGAGGAAAAGAAGGAAGAGCCGAAAGAGGAGAGCGATGACGACATGGGATTCAGCTTATTC
GAT
Protein sequenceShow/hide protein sequence
MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEESDDDMGFSLF
D