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MS009730 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009730
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationscaffold411:183201..183488
RNA-Seq ExpressionMS009730
SyntenyMS009730
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AES72578.2 SAUR-like auxin-responsive family protein [Medicago truncatula]3.3e-1958.89Show/hide
Query:  EGEGEIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQIHPTPLSSSPQTQTLWCF
        E   +IPKG +AV+VG  + EEQQ+FVIPVI +NHPLFM+LLKEAE+EYGF HKGPIIIPC +  FRTV   I    +  S      WCF
Subjt:  EGEGEIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQIHPTPLSSSPQTQTLWCF

OIV96868.1 hypothetical protein TanjilG_08729 [Lupinus angustifolius]9.7e-1956.38Show/hide
Query:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQI--------HPTPLSSSPQTQTLWCF
        +IPKG +A++VG  + EEQQRFVIPVI  NHPLFM+LLKEAE+EYGF+HKGPIIIPC +  FRTV   I        H          Q +WCF
Subjt:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQI--------HPTPLSSSPQTQTLWCF

XP_014517828.1 auxin-responsive protein SAUR32 [Vigna radiata var. radiata]3.3e-1960.47Show/hide
Query:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQIHPTPLSSSPQTQTLWCF
        ++PKG +AV+VG  + EEQQRFVIPV+ +NHPLFMKLLKEAEDEYGFQ KGPI IPC + HFRTV   I              WCF
Subjt:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQIHPTPLSSSPQTQTLWCF

XP_018504015.1 PREDICTED: auxin-responsive protein SAUR32 [Pyrus x bretschneideri]7.4e-1958.43Show/hide
Query:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQIHPTPLSSS---PQTQTLWCF
        +IPKG +AV+VG  + E+QQRFVIPVI +NHPLFM+LL+EAE EYGF HKGPI IPC +  FRTV   +    L  S   PQ    WCF
Subjt:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQIHPTPLSSS---PQTQTLWCF

XP_019416433.1 PREDICTED: auxin-responsive protein SAUR32-like [Lupinus angustifolius]9.7e-1956.38Show/hide
Query:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQI--------HPTPLSSSPQTQTLWCF
        +IPKG +A++VG  + EEQQRFVIPVI  NHPLFM+LLKEAE+EYGF+HKGPIIIPC +  FRTV   I        H          Q +WCF
Subjt:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQI--------HPTPLSSSPQTQTLWCF

TrEMBL top hitse value%identityAlignment
A0A1S3VHJ1 auxin-responsive protein SAUR321.6e-1960.47Show/hide
Query:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQIHPTPLSSSPQTQTLWCF
        ++PKG +AV+VG  + EEQQRFVIPV+ +NHPLFMKLLKEAEDEYGFQ KGPI IPC + HFRTV   I              WCF
Subjt:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQIHPTPLSSSPQTQTLWCF

A0A4P1QXA1 Uncharacterized protein4.7e-1956.38Show/hide
Query:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQI--------HPTPLSSSPQTQTLWCF
        +IPKG +A++VG  + EEQQRFVIPVI  NHPLFM+LLKEAE+EYGF+HKGPIIIPC +  FRTV   I        H          Q +WCF
Subjt:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQI--------HPTPLSSSPQTQTLWCF

A0A5N5F3Z8 Auxin-induced protein 15A3.6e-1958.43Show/hide
Query:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQIHPTPLSSS---PQTQTLWCF
        +IPKG +AV+VG  + E+QQRFVIPVI +NHPLFM+LL+EAE EYGF HKGPI IPC +  FRTV   +    L  S   PQ    WCF
Subjt:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQIHPTPLSSS---PQTQTLWCF

A0A6A5MGW4 Putative small auxin-up RNA1.0e-1858.43Show/hide
Query:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQIHPTPL---SSSPQTQTLWCF
        +IPKG +A++VG  + EEQQRFVIPVI  NHPLFM+LLKEAE+EYGF+HKGPIIIPC +  FRTV   I              Q +WCF
Subjt:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQIHPTPL---SSSPQTQTLWCF

G7J880 Putative small auxin-up RNA1.6e-1958.89Show/hide
Query:  EGEGEIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQIHPTPLSSSPQTQTLWCF
        E   +IPKG +AV+VG  + EEQQ+FVIPVI +NHPLFM+LLKEAE+EYGF HKGPIIIPC +  FRTV   I    +  S      WCF
Subjt:  EGEGEIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQIHPTPLSSSPQTQTLWCF

SwissProt top hitse value%identityAlignment
O22150 Auxin-responsive protein SAUR362.9e-1044.12Show/hide
Query:  IPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQI
        +P+G++A+ VG+ +  +  R ++P++  NHPLF +LL+EAE EYGF H+G I IPC    F  V  +I
Subjt:  IPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQI

P32295 Indole-3-acetic acid-induced protein ARG79.4e-0951.72Show/hide
Query:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQH-KGPIIIPC
        + PKGY+AV VG    E  +RFVIPV  +N PLF  LL +AE+E+G+ H  G + IPC
Subjt:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQH-KGPIIIPC

P33080 Auxin-induced protein X10A9.4e-0942.25Show/hide
Query:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQH-KGPIIIPCPIHHFRTVHNQIH
        E+PKGY+ V VG    ++ +RF+IPV  +N P F  LL +AE+E+G+ H  G + IPC    F TV + ++
Subjt:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQH-KGPIIIPCPIHHFRTVHNQIH

Q41220 Auxin-responsive protein SAUR152.1e-0842.65Show/hide
Query:  PKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQH-KGPIIIPCPIHHFRTVHNQI
        P+G++AV VG  + ++++R+V+PV  +N PLF +LL ++E+E+G+ H  G + IPC    F TV +QI
Subjt:  PKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQH-KGPIIIPCPIHHFRTVHNQI

Q9ZUZ3 Auxin-responsive protein SAUR321.6e-1661.54Show/hide
Query:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTV
        ++PKG +A+ VG  + EEQQRF++PV+  NHPLFM+LLKEAEDEYGF  KG I IPC +  FR V
Subjt:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTV

Arabidopsis top hitse value%identityAlignment
AT2G46690.1 SAUR-like auxin-responsive protein family1.1e-1761.54Show/hide
Query:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTV
        ++PKG +A+ VG  + EEQQRF++PV+  NHPLFM+LLKEAEDEYGF  KG I IPC +  FR V
Subjt:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTV

AT3G60690.1 SAUR-like auxin-responsive protein family6.5e-1345.59Show/hide
Query:  IPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQI
        +PKG+ AV +G+ +  + QR ++P++  NHPLF +LL+EAE+E+GF  +G I IPCP   F+ V  +I
Subjt:  IPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQI

AT3G61900.1 SAUR-like auxin-responsive protein family3.3e-1756.16Show/hide
Query:  GEGEIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQIH
        G  ++PKG +A+ VG  E EE+QRFV+PV   NHPLFM+LL+EAE+EYGF+ KG I IPC +  FR V + I+
Subjt:  GEGEIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQIH

AT4G00880.1 SAUR-like auxin-responsive protein family1.1e-1557.97Show/hide
Query:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQI
        ++PKG +AV VG  + EEQ+RFVIPV+  NHPLF +LLKEAE+E+GF  KG I IPC +  FR V   I
Subjt:  EIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQI

AT5G53590.1 SAUR-like auxin-responsive protein family6.3e-1652.86Show/hide
Query:  EIPKGYVAVVVGRCEMEE-QQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQI
        ++PKG VA++VG  + EE   RFV+P++ ++HPLF+ LLKEAE EYGF+H GPI IPC +  F+ V   I
Subjt:  EIPKGYVAVVVGRCEMEE-QQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGAGAAATGGGAGAGGGAGAGGGAGAAATCCCAAAAGGGTACGTGGCGGTGGTGGTGGGGCGATGCGAGATGGAGGAGCAGCAGAGGTTTGTGATTCCTGTGATTGACGT
CAACCATCCGCTGTTTATGAAGCTTCTGAAGGAGGCGGAGGATGAGTATGGGTTCCAACACAAGGGCCCCATCATAATCCCTTGCCCCATCCACCACTTTCGGACTGTTC
ATAACCAAATTCATCCCACGCCACTTTCTTCTTCTCCTCAAACTCAAACTCTATGGTGTTTCACTTTC
mRNA sequenceShow/hide mRNA sequence
AGAGAAATGGGAGAGGGAGAGGGAGAAATCCCAAAAGGGTACGTGGCGGTGGTGGTGGGGCGATGCGAGATGGAGGAGCAGCAGAGGTTTGTGATTCCTGTGATTGACGT
CAACCATCCGCTGTTTATGAAGCTTCTGAAGGAGGCGGAGGATGAGTATGGGTTCCAACACAAGGGCCCCATCATAATCCCTTGCCCCATCCACCACTTTCGGACTGTTC
ATAACCAAATTCATCCCACGCCACTTTCTTCTTCTCCTCAAACTCAAACTCTATGGTGTTTCACTTTC
Protein sequenceShow/hide protein sequence
REMGEGEGEIPKGYVAVVVGRCEMEEQQRFVIPVIDVNHPLFMKLLKEAEDEYGFQHKGPIIIPCPIHHFRTVHNQIHPTPLSSSPQTQTLWCFTF