CuGenDBv2

Gene ID	MS009737
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	F-box domain-containing protein
Genome location	scaffold411:216252..218298
RNA-Seq Expression	MS009737
Synteny	MS009737
Gene Ontology terms	GO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process) GO:0019005 - SCF ubiquitin ligase complex (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001810 - F-box domain IPR036047 - F-box-like domain superfamily IPR045118 - F-box only protein FBXO9/FBXO48

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7014689.1 pof10 [Cucurbita argyrosperma subsp. argyrosperma]

3.3e-83

92.02

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Query:  MERLPAEVCLKIFCLLDSQNLATALQVCWKWNSLASDNLLWSSLFKERWGEDHAAFYHPIGSKSWKDAYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
        MERLPAE+CLKIFCLLDSQ+LATALQVC KWNSLASDN+LWS+LFKERWGEDHAAFYHP+GSKSWKD+YEVQDRCDRFGLGLRIIREG+DYYLIHQGEIQ
Subjt:  MERLPAEVCLKIFCLLDSQNLATALQVCWKWNSLASDNLLWSSLFKERWGEDHAAFYHPIGSKSWKDAYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ

Query:  RHLGSRRQKNGQSNFLPLSSKREFLSEGILEEDKSCRGILDRILFFIGDLEVASTDAKRSRVL
        RHLGSRRQKNGQ++FLPLSSKRE LSEG+LEEDKSCRGILDRILFFIGDLEVASTDAKRSR L
Subjt:  RHLGSRRQKNGQSNFLPLSSKREFLSEGILEEDKSCRGILDRILFFIGDLEVASTDAKRSRVL

XP_004146236.1 F-box/WD repeat-containing protein pof1 [Cucumis sativus]

3.3e-83

92.02

Show/hide

Query:  MERLPAEVCLKIFCLLDSQNLATALQVCWKWNSLASDNLLWSSLFKERWGEDHAAFYHPIGSKSWKDAYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
        ME+LP E+C KIFC LDSQNLATALQVC KWNSLASDN+LWS+LFKERWGEDHAAFYHPIGSKSWKD+YEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
Subjt:  MERLPAEVCLKIFCLLDSQNLATALQVCWKWNSLASDNLLWSSLFKERWGEDHAAFYHPIGSKSWKDAYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ

Query:  RHLGSRRQKNGQSNFLPLSSKREFLSEGILEEDKSCRGILDRILFFIGDLEVASTDAKRSRVL
        RHLGSRRQKNGQ++FLPLSSKREFLSEG+LEEDKSCRGILDRILFFIGDLEVASTDAKRSR L
Subjt:  RHLGSRRQKNGQSNFLPLSSKREFLSEGILEEDKSCRGILDRILFFIGDLEVASTDAKRSRVL

XP_022140895.1 uncharacterized protein LOC111011451 [Momordica charantia]

4.0e-89

99.39

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Query:  MERLPAEVCLKIFCLLDSQNLATALQVCWKWNSLASDNLLWSSLFKERWGEDHAAFYHPIGSKSWKDAYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
        MERLPAEVCLKIFCLLDSQNLATALQVCWKWNSLASDNLLWSSLFKERWGEDHAAFYHPIGSKSWKDAYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
Subjt:  MERLPAEVCLKIFCLLDSQNLATALQVCWKWNSLASDNLLWSSLFKERWGEDHAAFYHPIGSKSWKDAYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ

Query:  RHLGSRRQKNGQSNFLPLSSKREFLSEGILEEDKSCRGILDRILFFIGDLEVASTDAKRSRVL
        RHLGSRRQKNGQ+NFLPLSSKREFLSEGILEEDKSCRGILDRILFFIGDLEVASTDAKRSRVL
Subjt:  RHLGSRRQKNGQSNFLPLSSKREFLSEGILEEDKSCRGILDRILFFIGDLEVASTDAKRSRVL

XP_022984536.1 uncharacterized protein LOC111482802 [Cucurbita maxima]

7.2e-83

91.41

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Query:  MERLPAEVCLKIFCLLDSQNLATALQVCWKWNSLASDNLLWSSLFKERWGEDHAAFYHPIGSKSWKDAYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
        MERLPAE+CLKIFCLLDSQ+LATALQVC KWNSLASDN+LWS+LFKERWGEDHAAFYHP+GSKSWKD+YEVQDRCDRFGLGLRIIREG+DYYLIHQGEIQ
Subjt:  MERLPAEVCLKIFCLLDSQNLATALQVCWKWNSLASDNLLWSSLFKERWGEDHAAFYHPIGSKSWKDAYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ

Query:  RHLGSRRQKNGQSNFLPLSSKREFLSEGILEEDKSCRGILDRILFFIGDLEVASTDAKRSRVL
        RHLGSRRQKNGQ++FLPLSSKRE LSEG+L+EDKSCRGILDRILFFIGDLEVASTDAKRSR L
Subjt:  RHLGSRRQKNGQSNFLPLSSKREFLSEGILEEDKSCRGILDRILFFIGDLEVASTDAKRSRVL

XP_023553429.1 uncharacterized protein LOC111810852 [Cucurbita pepo subsp. pepo]

3.3e-83

92.02

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Query:  MERLPAEVCLKIFCLLDSQNLATALQVCWKWNSLASDNLLWSSLFKERWGEDHAAFYHPIGSKSWKDAYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
        MERLPAE+CLKIFCLLDSQ+LATALQVC KWNSLASDN+LWS+LFKERWGEDHAAFYHP+GSKSWKD+YEVQDRCDRFGLGLRIIREG+DYYLIHQGEIQ
Subjt:  MERLPAEVCLKIFCLLDSQNLATALQVCWKWNSLASDNLLWSSLFKERWGEDHAAFYHPIGSKSWKDAYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ

Query:  RHLGSRRQKNGQSNFLPLSSKREFLSEGILEEDKSCRGILDRILFFIGDLEVASTDAKRSRVL
        RHLGSRRQKNGQ++FLPLSSKRE LSEG+LEEDKSCRGILDRILFFIGDLEVASTDAKRSR L
Subjt:  RHLGSRRQKNGQSNFLPLSSKREFLSEGILEEDKSCRGILDRILFFIGDLEVASTDAKRSRVL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LAG9 F-box domain-containing protein

1.6e-83

92.02

Show/hide

Query:  MERLPAEVCLKIFCLLDSQNLATALQVCWKWNSLASDNLLWSSLFKERWGEDHAAFYHPIGSKSWKDAYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
        ME+LP E+C KIFC LDSQNLATALQVC KWNSLASDN+LWS+LFKERWGEDHAAFYHPIGSKSWKD+YEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
Subjt:  MERLPAEVCLKIFCLLDSQNLATALQVCWKWNSLASDNLLWSSLFKERWGEDHAAFYHPIGSKSWKDAYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ

Query:  RHLGSRRQKNGQSNFLPLSSKREFLSEGILEEDKSCRGILDRILFFIGDLEVASTDAKRSRVL
        RHLGSRRQKNGQ++FLPLSSKREFLSEG+LEEDKSCRGILDRILFFIGDLEVASTDAKRSR L
Subjt:  RHLGSRRQKNGQSNFLPLSSKREFLSEGILEEDKSCRGILDRILFFIGDLEVASTDAKRSRVL

A0A1S3C264 uncharacterized protein LOC103496056

2.3e-82

91.41

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Query:  MERLPAEVCLKIFCLLDSQNLATALQVCWKWNSLASDNLLWSSLFKERWGEDHAAFYHPIGSKSWKDAYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
        ME+LP E+CLKIFC LDSQNLATALQVC KWNSLASDN+LWS+LFKERWGED AAFYHP GSKSWKD+YEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
Subjt:  MERLPAEVCLKIFCLLDSQNLATALQVCWKWNSLASDNLLWSSLFKERWGEDHAAFYHPIGSKSWKDAYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ

Query:  RHLGSRRQKNGQSNFLPLSSKREFLSEGILEEDKSCRGILDRILFFIGDLEVASTDAKRSRVL
        RHLGSRRQKNGQ++FLPLSSKREFLSEG+LEEDKSCRGILDRILFFIGDLEVASTDAKRSR L
Subjt:  RHLGSRRQKNGQSNFLPLSSKREFLSEGILEEDKSCRGILDRILFFIGDLEVASTDAKRSRVL

A0A6J1CGG1 uncharacterized protein LOC111011451

1.9e-89

99.39

Show/hide

Query:  MERLPAEVCLKIFCLLDSQNLATALQVCWKWNSLASDNLLWSSLFKERWGEDHAAFYHPIGSKSWKDAYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
        MERLPAEVCLKIFCLLDSQNLATALQVCWKWNSLASDNLLWSSLFKERWGEDHAAFYHPIGSKSWKDAYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
Subjt:  MERLPAEVCLKIFCLLDSQNLATALQVCWKWNSLASDNLLWSSLFKERWGEDHAAFYHPIGSKSWKDAYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ

Query:  RHLGSRRQKNGQSNFLPLSSKREFLSEGILEEDKSCRGILDRILFFIGDLEVASTDAKRSRVL
        RHLGSRRQKNGQ+NFLPLSSKREFLSEGILEEDKSCRGILDRILFFIGDLEVASTDAKRSRVL
Subjt:  RHLGSRRQKNGQSNFLPLSSKREFLSEGILEEDKSCRGILDRILFFIGDLEVASTDAKRSRVL

A0A6J1EAN4 F-box protein SKIP31-like isoform X1

2.3e-82

90.8

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Query:  MERLPAEVCLKIFCLLDSQNLATALQVCWKWNSLASDNLLWSSLFKERWGEDHAAFYHPIGSKSWKDAYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
        MERLPAE+CLKIFC LDSQ+LATALQVC KWN LASDN+LWS+LFKERWGEDHAAFYHP+GSKSWKD+YEVQDRCDRFGLGLRIIREG+DYYLIHQGEIQ
Subjt:  MERLPAEVCLKIFCLLDSQNLATALQVCWKWNSLASDNLLWSSLFKERWGEDHAAFYHPIGSKSWKDAYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ

Query:  RHLGSRRQKNGQSNFLPLSSKREFLSEGILEEDKSCRGILDRILFFIGDLEVASTDAKRSRVL
        RHLGSRRQKNGQ++FLPLSSKRE LSEG+LEEDKSCRGILDRILFFIGDLEVASTDAKRSR L
Subjt:  RHLGSRRQKNGQSNFLPLSSKREFLSEGILEEDKSCRGILDRILFFIGDLEVASTDAKRSRVL

A0A6J1J5J1 uncharacterized protein LOC111482802

3.5e-83

91.41

Show/hide

Query:  MERLPAEVCLKIFCLLDSQNLATALQVCWKWNSLASDNLLWSSLFKERWGEDHAAFYHPIGSKSWKDAYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
        MERLPAE+CLKIFCLLDSQ+LATALQVC KWNSLASDN+LWS+LFKERWGEDHAAFYHP+GSKSWKD+YEVQDRCDRFGLGLRIIREG+DYYLIHQGEIQ
Subjt:  MERLPAEVCLKIFCLLDSQNLATALQVCWKWNSLASDNLLWSSLFKERWGEDHAAFYHPIGSKSWKDAYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ

Query:  RHLGSRRQKNGQSNFLPLSSKREFLSEGILEEDKSCRGILDRILFFIGDLEVASTDAKRSRVL
        RHLGSRRQKNGQ++FLPLSSKRE LSEG+L+EDKSCRGILDRILFFIGDLEVASTDAKRSR L
Subjt:  RHLGSRRQKNGQSNFLPLSSKREFLSEGILEEDKSCRGILDRILFFIGDLEVASTDAKRSRVL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGAAAGATTGCCCGCGGAAGTCTGCCTTAAGATATTTTGTTTGTTGGATTCACAGAACCTCGCTACTGCACTACAAGTTTGCTGGAAGTGGAACTCCTTAGCTTCAGA
CAATCTCTTGTGGTCAAGCTTATTCAAGGAGAGGTGGGGGGAAGACCATGCTGCATTCTATCATCCTATCGGCTCAAAGTCATGGAAGGATGCATATGAGGTGCAAGATC
GATGTGATCGGTTTGGATTGGGCCTAAGAATAATCCGAGAAGGGAATGACTACTATCTCATTCACCAAGGTGAGATCCAAAGGCACCTAGGTTCAAGAAGACAGAAGAAT
GGGCAGAGTAACTTTCTTCCTTTGAGTTCAAAAAGAGAGTTCCTATCAGAAGGAATTCTCGAAGAAGACAAATCCTGTCGAGGAATTCTGGATAGAATCCTGTTCTTCAT
TGGGGATTTGGAAGTTGCTTCAACAGATGCAAAGCGTAGCAGGGTCCTG

mRNA sequence

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Protein sequence

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MERLPAEVCLKIFCLLDSQNLATALQVCWKWNSLASDNLLWSSLFKERWGEDHAAFYHPIGSKSWKDAYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQRHLGSRRQKN
GQSNFLPLSSKREFLSEGILEEDKSCRGILDRILFFIGDLEVASTDAKRSRVL

MS009737 (gene) of Bitter gourd (TR) v1 genome