; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS009778 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009778
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionclass I heat shock protein-like
Genome locationscaffold173:193856..195186
RNA-Seq ExpressionMS009778
SyntenyMS009778
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0009408 - response to heat (biological process)
GO:0009651 - response to salt stress (biological process)
GO:0042542 - response to hydrogen peroxide (biological process)
GO:0051259 - protein complex oligomerization (biological process)
GO:0043621 - protein self-association (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone
IPR031107 - Small heat shock protein HSP20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066962.1 class I heat shock protein-like [Cucumis melo var. makuwa]1.6e-4063.01Show/hide
Query:  MSSILNIAGAGELLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALAD--------------HYRASIGDENDESSGNKWWRMERCRG
        MS ILN     E+ D FLS+INQCPVLNTPTDWKETPAAHV IADLPGL KDQVKV + +                  +  D+NDESSG+KW R+ERCRG
Subjt:  MSSILNIAGAGELLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALAD--------------HYRASIGDENDESSGNKWWRMERCRG

Query:  KFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKPQRKVIEIQ
        KFCRRFRLP N K  EV+ AM+NGVL VTVPK  VKKP++KVIEI+
Subjt:  KFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKPQRKVIEIQ

XP_004145723.1 class I heat shock protein [Cucumis sativus]9.5e-4164.96Show/hide
Query:  ELLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVAL---------------ADHYRASIGDENDESSGNKWWRMERCRGKFCRRFRLPE
        E+ D FLS+INQCPVLNTPTDWKETPAAH+ IADLPGL KDQVKV +                D   A    +NDESSG+KW R+ERCRGKFCRRFRLP 
Subjt:  ELLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVAL---------------ADHYRASIGDENDESSGNKWWRMERCRGKFCRRFRLPE

Query:  NAKGSEVTVAMDNGVLTVTVPKGEVKKPQRKVIEIQT
        N K  EV  AM+NGVL VTVPK EVKKP++KVIEI+T
Subjt:  NAKGSEVTVAMDNGVLTVTVPKGEVKKPQRKVIEIQT

XP_008450042.1 PREDICTED: class I heat shock protein-like [Cucumis melo]2.5e-4163.7Show/hide
Query:  MSSILNIAGAGELLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALAD--------------HYRASIGDENDESSGNKWWRMERCRG
        MS ILN     E+ D FLS+INQCPVLNTPTDWKETPAAHV IADLPGL KDQVKV + +                  +  D+NDESSG+KW R+ERCRG
Subjt:  MSSILNIAGAGELLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALAD--------------HYRASIGDENDESSGNKWWRMERCRG

Query:  KFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKPQRKVIEIQ
        KFCRRFRLP N K  EV+ AM+NGVL VTVPK EVKKP++KVIEI+
Subjt:  KFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKPQRKVIEIQ

XP_022154167.1 18.1 kDa class I heat shock protein-like [Momordica charantia]1.0e-6383.87Show/hide
Query:  MSSILNIAGAGELLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHY----------------------RASIGDENDESSGNKW
        MSSILNIAGAGELLD FLS+INQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADH                       RASIGDENDESSGNKW
Subjt:  MSSILNIAGAGELLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHY----------------------RASIGDENDESSGNKW

Query:  WRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKPQRKVIEIQT
        WRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKPQRKVIEIQT
Subjt:  WRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKPQRKVIEIQT

XP_038875560.1 class I heat shock protein-like [Benincasa hispida]1.7e-4264.14Show/hide
Query:  MSSILNIAGAGELLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVAL------------ADHYRASIGDENDESSGNKWWRMERCRGKF
        MS ILN     EL D FLS+IN+CPVLNTP DWKETPAAH+ IADLPGL K+QV+V +             D   A+  DENDESSG+KW  +ERCRGKF
Subjt:  MSSILNIAGAGELLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVAL------------ADHYRASIGDENDESSGNKWWRMERCRGKF

Query:  CRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKPQRKVIEIQT
        CRRFRLPEN K  EV  AM+NG+LTVTVPK EVKKP++KVIEI+T
Subjt:  CRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKPQRKVIEIQT

TrEMBL top hitse value%identityAlignment
A0A0A0L8Q9 SHSP domain-containing protein4.6e-4164.96Show/hide
Query:  ELLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVAL---------------ADHYRASIGDENDESSGNKWWRMERCRGKFCRRFRLPE
        E+ D FLS+INQCPVLNTPTDWKETPAAH+ IADLPGL KDQVKV +                D   A    +NDESSG+KW R+ERCRGKFCRRFRLP 
Subjt:  ELLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVAL---------------ADHYRASIGDENDESSGNKWWRMERCRGKFCRRFRLPE

Query:  NAKGSEVTVAMDNGVLTVTVPKGEVKKPQRKVIEIQT
        N K  EV  AM+NGVL VTVPK EVKKP++KVIEI+T
Subjt:  NAKGSEVTVAMDNGVLTVTVPKGEVKKPQRKVIEIQT

A0A1S3BNE8 class I heat shock protein-like1.2e-4163.7Show/hide
Query:  MSSILNIAGAGELLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALAD--------------HYRASIGDENDESSGNKWWRMERCRG
        MS ILN     E+ D FLS+INQCPVLNTPTDWKETPAAHV IADLPGL KDQVKV + +                  +  D+NDESSG+KW R+ERCRG
Subjt:  MSSILNIAGAGELLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALAD--------------HYRASIGDENDESSGNKWWRMERCRG

Query:  KFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKPQRKVIEIQ
        KFCRRFRLP N K  EV+ AM+NGVL VTVPK EVKKP++KVIEI+
Subjt:  KFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKPQRKVIEIQ

A0A5A7VF09 Class I heat shock protein-like7.9e-4163.01Show/hide
Query:  MSSILNIAGAGELLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALAD--------------HYRASIGDENDESSGNKWWRMERCRG
        MS ILN     E+ D FLS+INQCPVLNTPTDWKETPAAHV IADLPGL KDQVKV + +                  +  D+NDESSG+KW R+ERCRG
Subjt:  MSSILNIAGAGELLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALAD--------------HYRASIGDENDESSGNKWWRMERCRG

Query:  KFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKPQRKVIEIQ
        KFCRRFRLP N K  EV+ AM+NGVL VTVPK  VKKP++KVIEI+
Subjt:  KFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKPQRKVIEIQ

A0A6J1DKY6 18.1 kDa class I heat shock protein-like5.1e-6483.87Show/hide
Query:  MSSILNIAGAGELLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHY----------------------RASIGDENDESSGNKW
        MSSILNIAGAGELLD FLS+INQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADH                       RASIGDENDESSGNKW
Subjt:  MSSILNIAGAGELLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHY----------------------RASIGDENDESSGNKW

Query:  WRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKPQRKVIEIQT
        WRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKPQRKVIEIQT
Subjt:  WRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKPQRKVIEIQT

A0A803QLB8 Uncharacterized protein4.5e-3654.73Show/hide
Query:  MSSILNIAGAGE-LLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALAD---------------HYRASIGDENDESSGNKWWRMERC
        MS +  I G  E +LD FLS++N+CPVLNTPTDWKETP AHV ++DLPGL+KDQVKV + D                Y   +  E     G+ W R+ERC
Subjt:  MSSILNIAGAGE-LLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALAD---------------HYRASIGDENDESSGNKWWRMERC

Query:  RGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKPQRKVIEIQ
        RG+F RRFRLPENAK +EV   M+NGVLTVT+PK EVKKP+ K+++IQ
Subjt:  RGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKPQRKVIEIQ

SwissProt top hitse value%identityAlignment
P04794 17.5 kDa class I heat shock protein1.8e-2657.41Show/hide
Query:  LNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHYRASIGDEND---ESSGNKWWRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKK
        ++T  DWKETP AHV  AD+PGL K++VKV + D     I  E +   E   + W R+ER  GKF RRFRLPENAK +EV  +M+NGVLTVTVPK EVKK
Subjt:  LNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHYRASIGDEND---ESSGNKWWRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKK

Query:  PQRKVIEI
        P  K IEI
Subjt:  PQRKVIEI

P27396 17.8 kDa class I heat shock protein1.4e-2658.33Show/hide
Query:  LNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHYRASIGDEND---ESSGNKWWRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKK
        +NT  DWKETP AHV  ADLPGL K++VKV L +     I  E +   E   +KW R+ER  GKF RRFRLPENAK  EV  AM NGV+TVTVPK E+KK
Subjt:  LNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHYRASIGDEND---ESSGNKWWRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKK

Query:  PQRKVIEI
        P+ K I+I
Subjt:  PQRKVIEI

P27879 18.1 kDa class I heat shock protein (Fragment)1.1e-2656.36Show/hide
Query:  LNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHYRASIGDEND---ESSGNKWWRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKK
        ++T  DWKETP AHV  ADLPGL K++VKV + D     I  E +   E   ++W R+ER  GKF RRFRLPENAK  +V  AM+NGVLTVTVPK E+KK
Subjt:  LNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHYRASIGDEND---ESSGNKWWRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKK

Query:  PQRKVIEIQT
        P+ K IEI +
Subjt:  PQRKVIEIQT

P27880 18.2 kDa class I heat shock protein1.8e-2656.48Show/hide
Query:  LNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHYRASIGDEND---ESSGNKWWRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKK
        ++T  DWKETP AHV  ADLPG+ K++VKV + D     I  E     E   ++W R+ER  GKF RRFRLPENAK  +V  AM+NGVLTVTVPK EVKK
Subjt:  LNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHYRASIGDEND---ESSGNKWWRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKK

Query:  PQRKVIEI
        P+ K I+I
Subjt:  PQRKVIEI

P30221 17.8 kDa class I heat shock protein4.0e-2657.94Show/hide
Query:  NTPTDWKETPAAHVLIADLPGLSKDQVKVALADHYRASIGDEND---ESSGNKWWRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKP
        NT  DWKETP  HV   DLPGL K++VKV + +     I  E +   E   +KW RMER  GKF RRFRLPENAK  +V  +M+NGVLTVTVPK EVKKP
Subjt:  NTPTDWKETPAAHVLIADLPGLSKDQVKVALADHYRASIGDEND---ESSGNKWWRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKP

Query:  QRKVIEI
        + K IEI
Subjt:  QRKVIEI

Arabidopsis top hitse value%identityAlignment
AT1G53540.1 HSP20-like chaperones superfamily protein2.7e-2554.21Show/hide
Query:  NTPTDWKETPAAHVLIADLPGLSKDQVKVALADHYRASIGDE---NDESSGNKWWRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKP
        N   DW+ETP AHV  ADLPGL K++VKV + D     I  E    +E   +KW R+ER  GKF RRFRLPENAK  E+  +M+NGVL+VTVPK   KKP
Subjt:  NTPTDWKETPAAHVLIADLPGLSKDQVKVALADHYRASIGDE---NDESSGNKWWRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKP

Query:  QRKVIEI
        + K I+I
Subjt:  QRKVIEI

AT1G59860.1 HSP20-like chaperones superfamily protein3.1e-2149.55Show/hide
Query:  VLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHYRASIGDE---NDESSGNKWWRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEV-
        + N   DWKET  AHV  ADLPG+ K++VKV + D     I  E     E   + W R+ER  G F R+FRLPEN K  +V  +M+NGVLTVTVPK E  
Subjt:  VLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHYRASIGDE---NDESSGNKWWRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEV-

Query:  -KKPQRKVIEI
         KK Q K I+I
Subjt:  -KKPQRKVIEI

AT2G29500.1 HSP20-like chaperones superfamily protein1.3e-2449.59Show/hide
Query:  ELLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHYRASIGDE---NDESSGNKWWRMERCRGKFCRRFRLPENAKGSEVTVAMD
        EL    LS  N   ++N   DW+ETP AHV  ADLPGL K++VKV + +     I  E     E   + W R+ER  G+F RRFRLPEN K  +V  AM+
Subjt:  ELLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHYRASIGDE---NDESSGNKWWRMERCRGKFCRRFRLPENAKGSEVTVAMD

Query:  NGVLTVTVPKGEVKKPQRKVIEI
        NGVLTVTVPK E KK   K I+I
Subjt:  NGVLTVTVPKGEVKKPQRKVIEI

AT3G46230.1 heat shock protein 17.43.9e-2451.4Show/hide
Query:  NTPTDWKETPAAHVLIADLPGLSKDQVKVALADHYRASIGDE---NDESSGNKWWRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKP
        N   DW+ETP AHV  AD+PGL K++VKV + D     I  E    +E   + W R+ER  GKF RRFRLPENAK  EV  +M+NGVL+VTVPK +  KP
Subjt:  NTPTDWKETPAAHVLIADLPGLSKDQVKVALADHYRASIGDE---NDESSGNKWWRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKP

Query:  QRKVIEI
        + K ++I
Subjt:  QRKVIEI

AT5G59720.1 heat shock protein 18.21.9e-2657.01Show/hide
Query:  NTPTDWKETPAAHVLIADLPGLSKDQVKVALADHYRASIGDE---NDESSGNKWWRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKP
        N   DWKETP AHV  ADLPGL K++VKV + D     I  E    +E   +KW R+ER  GKF RRFRLPENAK  EV   M+NGVLTV VPK   KKP
Subjt:  NTPTDWKETPAAHVLIADLPGLSKDQVKVALADHYRASIGDE---NDESSGNKWWRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKP

Query:  QRKVIEI
        Q K I+I
Subjt:  QRKVIEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCGATTCTCAATATCGCCGGCGCCGGCGAGCTCTTGGACCGCTTCCTCTCTGTCATAAACCAGTGTCCCGTTCTGAACACGCCCACCGACTGGAAAGAGACTCC
GGCGGCTCACGTTTTAATCGCCGATCTGCCGGGTCTCAGCAAGGACCAGGTCAAGGTGGCGCTCGCGGACCACTATAGAGCAAGTATCGGAGACGAGAACGATGAGAGCA
GTGGAAATAAGTGGTGGCGCATGGAGCGGTGCCGGGGGAAGTTCTGCAGGAGGTTCCGGCTGCCGGAGAATGCGAAGGGCAGCGAGGTAACGGTAGCGATGGATAACGGA
GTGCTAACGGTGACGGTGCCCAAAGGGGAAGTGAAGAAGCCACAGAGGAAGGTGATTGAGATCCAAACA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCGATTCTCAATATCGCCGGCGCCGGCGAGCTCTTGGACCGCTTCCTCTCTGTCATAAACCAGTGTCCCGTTCTGAACACGCCCACCGACTGGAAAGAGACTCC
GGCGGCTCACGTTTTAATCGCCGATCTGCCGGGTCTCAGCAAGGACCAGGTCAAGGTGGCGCTCGCGGACCACTATAGAGCAAGTATCGGAGACGAGAACGATGAGAGCA
GTGGAAATAAGTGGTGGCGCATGGAGCGGTGCCGGGGGAAGTTCTGCAGGAGGTTCCGGCTGCCGGAGAATGCGAAGGGCAGCGAGGTAACGGTAGCGATGGATAACGGA
GTGCTAACGGTGACGGTGCCCAAAGGGGAAGTGAAGAAGCCACAGAGGAAGGTGATTGAGATCCAAACA
Protein sequenceShow/hide protein sequence
MSSILNIAGAGELLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHYRASIGDENDESSGNKWWRMERCRGKFCRRFRLPENAKGSEVTVAMDNG
VLTVTVPKGEVKKPQRKVIEIQT