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MS009785 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009785
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF1713 domain-containing protein
Genome locationscaffold173:271024..271413
RNA-Seq ExpressionMS009785
SyntenyMS009785
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
InterPro domainsIPR013177 - Mitochondrial mRNA-processing protein COX24, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056277.1 DUF1713 domain-containing protein [Cucumis melo var. makuwa]1.1e-4983.08Show/hide
Query:  MASMLQKLVRKSPPTRIIAALRSQPSQNLSAPCILHQPLDIISKPDGHWDANLNSVSASNPSQFLQFYPSFPFGLCLPQISSTGLVPFVPDYDEQDDSRK
        MASMLQKL+RKSPP+R+IAAL +Q SQNLS P ILHQPLD   K D H  +NLNS S SNPSQF QFYPSFPFGLCLPQISSTGL+PF PDY EQDDSRK
Subjt:  MASMLQKLVRKSPPTRIIAALRSQPSQNLSAPCILHQPLDIISKPDGHWDANLNSVSASNPSQFLQFYPSFPFGLCLPQISSTGLVPFVPDYDEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
KAE8650785.1 hypothetical protein Csa_017463 [Cucumis sativus]9.3e-4981.54Show/hide
Query:  MASMLQKLVRKSPPTRIIAALRSQPSQNLSAPCILHQPLDIISKPDGHWDANLNSVSASNPSQFLQFYPSFPFGLCLPQISSTGLVPFVPDYDEQDDSRK
        MASMLQ L+RKSPPTR+IAAL +Q SQNLS P ILHQPLD   KPD H  +N+NS S SNPS F QFYPSFPFGLCLPQISSTGL+PF PD  EQDDSRK
Subjt:  MASMLQKLVRKSPPTRIIAALRSQPSQNLSAPCILHQPLDIISKPDGHWDANLNSVSASNPSQFLQFYPSFPFGLCLPQISSTGLVPFVPDYDEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
XP_011651574.1 uncharacterized protein LOC101220058 [Cucumis sativus]9.3e-4981.54Show/hide
Query:  MASMLQKLVRKSPPTRIIAALRSQPSQNLSAPCILHQPLDIISKPDGHWDANLNSVSASNPSQFLQFYPSFPFGLCLPQISSTGLVPFVPDYDEQDDSRK
        MASMLQ L+RKSPPTR+IAAL +Q SQNLS P ILHQPLD   KPD H  +N+NS S SNPS F QFYPSFPFGLCLPQISSTGL+PF PD  EQDDSRK
Subjt:  MASMLQKLVRKSPPTRIIAALRSQPSQNLSAPCILHQPLDIISKPDGHWDANLNSVSASNPSQFLQFYPSFPFGLCLPQISSTGLVPFVPDYDEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
XP_022154198.1 uncharacterized protein LOC111021516 [Momordica charantia]3.5e-64100Show/hide
Query:  MASMLQKLVRKSPPTRIIAALRSQPSQNLSAPCILHQPLDIISKPDGHWDANLNSVSASNPSQFLQFYPSFPFGLCLPQISSTGLVPFVPDYDEQDDSRK
        MASMLQKLVRKSPPTRIIAALRSQPSQNLSAPCILHQPLDIISKPDGHWDANLNSVSASNPSQFLQFYPSFPFGLCLPQISSTGLVPFVPDYDEQDDSRK
Subjt:  MASMLQKLVRKSPPTRIIAALRSQPSQNLSAPCILHQPLDIISKPDGHWDANLNSVSASNPSQFLQFYPSFPFGLCLPQISSTGLVPFVPDYDEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
XP_022928332.1 uncharacterized protein LOC111435191 [Cucurbita moschata]2.1e-4882.31Show/hide
Query:  MASMLQKLVRKSPPTRIIAALRSQPSQNLSAPCILHQPLDIISKPDGHWDANLNSVSASNPSQFLQFYPSFPFGLCLPQISSTGLVPFVPDYDEQDDSRK
        MAS+LQKL+RKSPPTR IAAL SQ SQNLS P ILHQPLDI  KPDGH D+NLN+VS SNPSQF  F+PSFPFGLCL QISSTG + F PDY E DDSRK
Subjt:  MASMLQKLVRKSPPTRIIAALRSQPSQNLSAPCILHQPLDIISKPDGHWDANLNSVSASNPSQFLQFYPSFPFGLCLPQISSTGLVPFVPDYDEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
TrEMBL top hitse value%identityAlignment
A0A0A0LDP0 DUF1713 domain-containing protein4.5e-4981.54Show/hide
Query:  MASMLQKLVRKSPPTRIIAALRSQPSQNLSAPCILHQPLDIISKPDGHWDANLNSVSASNPSQFLQFYPSFPFGLCLPQISSTGLVPFVPDYDEQDDSRK
        MASMLQ L+RKSPPTR+IAAL +Q SQNLS P ILHQPLD   KPD H  +N+NS S SNPS F QFYPSFPFGLCLPQISSTGL+PF PD  EQDDSRK
Subjt:  MASMLQKLVRKSPPTRIIAALRSQPSQNLSAPCILHQPLDIISKPDGHWDANLNSVSASNPSQFLQFYPSFPFGLCLPQISSTGLVPFVPDYDEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A5A7UNU9 DUF1713 domain-containing protein5.3e-5083.08Show/hide
Query:  MASMLQKLVRKSPPTRIIAALRSQPSQNLSAPCILHQPLDIISKPDGHWDANLNSVSASNPSQFLQFYPSFPFGLCLPQISSTGLVPFVPDYDEQDDSRK
        MASMLQKL+RKSPP+R+IAAL +Q SQNLS P ILHQPLD   K D H  +NLNS S SNPSQF QFYPSFPFGLCLPQISSTGL+PF PDY EQDDSRK
Subjt:  MASMLQKLVRKSPPTRIIAALRSQPSQNLSAPCILHQPLDIISKPDGHWDANLNSVSASNPSQFLQFYPSFPFGLCLPQISSTGLVPFVPDYDEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A6J1DLC2 uncharacterized protein LOC1110215161.7e-64100Show/hide
Query:  MASMLQKLVRKSPPTRIIAALRSQPSQNLSAPCILHQPLDIISKPDGHWDANLNSVSASNPSQFLQFYPSFPFGLCLPQISSTGLVPFVPDYDEQDDSRK
        MASMLQKLVRKSPPTRIIAALRSQPSQNLSAPCILHQPLDIISKPDGHWDANLNSVSASNPSQFLQFYPSFPFGLCLPQISSTGLVPFVPDYDEQDDSRK
Subjt:  MASMLQKLVRKSPPTRIIAALRSQPSQNLSAPCILHQPLDIISKPDGHWDANLNSVSASNPSQFLQFYPSFPFGLCLPQISSTGLVPFVPDYDEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A6J1EJL0 uncharacterized protein LOC1114351911.0e-4882.31Show/hide
Query:  MASMLQKLVRKSPPTRIIAALRSQPSQNLSAPCILHQPLDIISKPDGHWDANLNSVSASNPSQFLQFYPSFPFGLCLPQISSTGLVPFVPDYDEQDDSRK
        MAS+LQKL+RKSPPTR IAAL SQ SQNLS P ILHQPLDI  KPDGH D+NLN+VS SNPSQF  F+PSFPFGLCL QISSTG + F PDY E DDSRK
Subjt:  MASMLQKLVRKSPPTRIIAALRSQPSQNLSAPCILHQPLDIISKPDGHWDANLNSVSASNPSQFLQFYPSFPFGLCLPQISSTGLVPFVPDYDEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A6J1F832 uncharacterized protein LOC1114417231.4e-4780Show/hide
Query:  MASMLQKLVRKSPPTRIIAALRSQPSQNLSAPCILHQPLDIISKPDGHWDANLNSVSASNPSQFLQFYPSFPFGLCLPQISSTGLVPFVPDYDEQDDSRK
        MASMLQKLVRKSPPTR+IAAL +Q SQN   P ILHQPLD   KPD H D+NLNSVS SNPS F  FYPSFPFG CLPQISS+G++PF P++ EQDDSRK
Subjt:  MASMLQKLVRKSPPTRIIAALRSQPSQNLSAPCILHQPLDIISKPDGHWDANLNSVSASNPSQFLQFYPSFPFGLCLPQISSTGLVPFVPDYDEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G63150.1 unknown protein8.2e-1145.26Show/hide
Query:  IISKPDGHWDAN-LNSVSASNPSQFLQFYPSFPFGLCL--PQISSTGLVPFVPDYDEQDDSRK--LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        +I KPD     N L ++S +  +Q ++FYPSF  GLCL    I    L       +E++D+++  ++ADSVKKKRK+KMNKHKY+KLRK+L R++
Subjt:  IISKPDGHWDAN-LNSVSASNPSQFLQFYPSFPFGLCL--PQISSTGLVPFVPDYDEQDDSRK--LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGATGCTCCAAAAACTCGTCAGAAAATCGCCACCCACAAGAATAATTGCTGCTTTGCGTAGCCAGCCGTCACAAAATCTCTCAGCACCCTGCATTCTTCACCA
GCCGCTCGATATCATCAGTAAACCAGATGGGCATTGGGATGCTAATTTGAACTCAGTTTCTGCTTCGAATCCGTCTCAGTTTTTGCAGTTTTACCCTAGTTTTCCGTTTG
GGCTTTGCTTGCCGCAAATCTCCTCAACTGGGTTGGTTCCGTTCGTGCCGGATTATGATGAGCAAGATGATTCTCGGAAGTTGTGGGCTGATAGCGTGAAAAAGAAGAGG
AAGCGGAAGATGAACAAGCACAAGTACAAGAAGCTGCGGAAGCGGCTCCGGAGGCAGACA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGATGCTCCAAAAACTCGTCAGAAAATCGCCACCCACAAGAATAATTGCTGCTTTGCGTAGCCAGCCGTCACAAAATCTCTCAGCACCCTGCATTCTTCACCA
GCCGCTCGATATCATCAGTAAACCAGATGGGCATTGGGATGCTAATTTGAACTCAGTTTCTGCTTCGAATCCGTCTCAGTTTTTGCAGTTTTACCCTAGTTTTCCGTTTG
GGCTTTGCTTGCCGCAAATCTCCTCAACTGGGTTGGTTCCGTTCGTGCCGGATTATGATGAGCAAGATGATTCTCGGAAGTTGTGGGCTGATAGCGTGAAAAAGAAGAGG
AAGCGGAAGATGAACAAGCACAAGTACAAGAAGCTGCGGAAGCGGCTCCGGAGGCAGACA
Protein sequenceShow/hide protein sequence
MASMLQKLVRKSPPTRIIAALRSQPSQNLSAPCILHQPLDIISKPDGHWDANLNSVSASNPSQFLQFYPSFPFGLCLPQISSTGLVPFVPDYDEQDDSRKLWADSVKKKR
KRKMNKHKYKKLRKRLRRQT