CuGenDBv2

Gene ID	MS009786
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	C2H2-type domain-containing protein
Genome location	scaffold173:276762..279347
RNA-Seq Expression	MS009786
Synteny	MS009786
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR013087 - Zinc finger C2H2-type

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022154197.1 uncharacterized protein LOC111021515 [Momordica charantia]

4.1e-135

99.58

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Query:  STPKQDFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTS
        STPKQDFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTS
Subjt:  STPKQDFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTS

Query:  RIKCLADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVL
        RIKCLADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQG+EVRTSWFYIVISILTVL
Subjt:  RIKCLADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVL

Query:  FVLFFYVFIYLYKRGMRTRPQVLKRLSESGRKKKPS
        FVLFFYVFIYLYKRGMRTRPQVLKRLSESGRKKKPS
Subjt:  FVLFFYVFIYLYKRGMRTRPQVLKRLSESGRKKKPS

XP_022935004.1 uncharacterized protein LOC111441996 [Cucurbita moschata]

7.4e-121

87.29

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Query:  STPKQDFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTS
        STPKQD NNAHEVHCSRERSR AWKIIEEYLMPF++K++YK+ST CRLHPDNDMFRDQEQHKSHLDFN+WKCGYC+K+FYEEKYLDQHF NRHYDLLN S
Subjt:  STPKQDFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTS

Query:  RIKCLADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVL
        R KCLAD CGALHCDRV++T+SQKSKCNPAAAAR KHMCE LADSCFP+ +GASASHLHEFFLRQFCDAHTCSGKPKPFS+GR+VRTS FYIVIS+LTV+
Subjt:  RIKCLADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVL

Query:  FVLFFYVFIYLYKRGMRTRPQVLKRLSESGRKKKPS
        FVLFFYVFIYLYKRGMRTRPQVLKRLS+SG KKKPS
Subjt:  FVLFFYVFIYLYKRGMRTRPQVLKRLSESGRKKKPS

XP_022984012.1 uncharacterized protein LOC111482459 [Cucurbita maxima]

7.4e-121

87.71

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Query:  STPKQDFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTS
        STPKQD NNAHEVHCSRERSR AWKIIEEYLMPFV+K++YKIST CRLHPDNDMFRDQEQHKSHLDFN+WKCGYC+K+FYEEKYLDQHF NRHYDLLN S
Subjt:  STPKQDFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTS

Query:  RIKCLADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVL
        R KCLAD CGALHCDRV++++SQKSKCNPAAAAR KHMCE LADSCFP+ +GASASHLHEFFLRQFCDAHTCSGKPKPFS+GR+VRTS FYIVIS+LTV+
Subjt:  RIKCLADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVL

Query:  FVLFFYVFIYLYKRGMRTRPQVLKRLSESGRKKKPS
        FVLFFYVFIYLYKRGMRTRPQVLKRLS+SG KKKPS
Subjt:  FVLFFYVFIYLYKRGMRTRPQVLKRLSESGRKKKPS

XP_023526204.1 uncharacterized protein LOC111789755 [Cucurbita pepo subsp. pepo]

3.3e-121

87.71

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Query:  STPKQDFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTS
        STPKQD NNAHEVHCSRERSR AWKIIEEYLMPFV+K++YKIST CRLHPDNDMFRDQEQHKSHLDFN+WKCGYC+K+FYEEKYLDQHF NRHYDLLN S
Subjt:  STPKQDFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTS

Query:  RIKCLADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVL
        R KCLAD CGALHCDRV++T+SQKSKCNPAAAAR KHMCE LADSCFP+ +GASASHLHEFFLRQFCDAHTCSGKPKPFS+GR+VRTS FY+VIS+LTV+
Subjt:  RIKCLADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVL

Query:  FVLFFYVFIYLYKRGMRTRPQVLKRLSESGRKKKPS
        FVLFFYVFIYLYKRGMRTRPQVLKRLS+SG KKKPS
Subjt:  FVLFFYVFIYLYKRGMRTRPQVLKRLSESGRKKKPS

XP_038891552.1 uncharacterized protein LOC120080934 [Benincasa hispida]

3.0e-122

89.41

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Query:  STPKQDFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTS
        STPKQD+NNAHEVHCSRERSR AWKIIEEYLMPFV K+KYKIS+ CRLHPDNDMFRDQEQHKSHLDFN+WKCGYCRKRFYEEKYLDQHFDNRHY+LLN S
Subjt:  STPKQDFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTS

Query:  RIKCLADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVL
        R +CLAD+CGALHCD V++TVSQKSKCNPAAAAR KHMCE LADSCFPV EGASASHLHEFFLRQFCDAHTCSGKPKPFS+GR+VR + FYIVIS+LTVL
Subjt:  RIKCLADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVL

Query:  FVLFFYVFIYLYKRGMRTRPQVLKRLSESGRKKKPS
        FVLFFYVFIYLYKRGMRTRPQVLKRLS+SGRKKKPS
Subjt:  FVLFFYVFIYLYKRGMRTRPQVLKRLSESGRKKKPS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BMS8 uncharacterized protein LOC103491758

1.8e-120

86.86

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Query:  STPKQDFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTS
        STPKQD+NNAHEVHCSRERSR AWK+IEEYLMPFV K+KY+IST CRLHPDNDMFRDQEQHKSHLDFN+WKCGYCRKRFYEEKY+DQHFDNRHY+LLN S
Subjt:  STPKQDFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTS

Query:  RIKCLADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVL
        R +CLAD+CGALHCD V++ VSQKSKCNPAAAAR KHMCE LADSCFPV EGA ASHLHEFFLRQFCDAHTCSGKPKPFS+GR+VRTS FYIVIS+LT+L
Subjt:  RIKCLADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVL

Query:  FVLFFYVFIYLYKRGMRTRPQVLKRLSESGRKKKPS
        FV+FFYVF YLY RGMRTRPQVLKRLS+SGRKKKPS
Subjt:  FVLFFYVFIYLYKRGMRTRPQVLKRLSESGRKKKPS

A0A5A7URM7 Zinc finger family protein

1.8e-120

86.86

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Query:  STPKQDFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTS
        STPKQD+NNAHEVHCSRERSR AWK+IEEYLMPFV K+KY+IST CRLHPDNDMFRDQEQHKSHLDFN+WKCGYCRKRFYEEKY+DQHFDNRHY+LLN S
Subjt:  STPKQDFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTS

Query:  RIKCLADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVL
        R +CLAD+CGALHCD V++ VSQKSKCNPAAAAR KHMCE LADSCFPV EGA ASHLHEFFLRQFCDAHTCSGKPKPFS+GR+VRTS FYIVIS+LT+L
Subjt:  RIKCLADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVL

Query:  FVLFFYVFIYLYKRGMRTRPQVLKRLSESGRKKKPS
        FV+FFYVF YLY RGMRTRPQVLKRLS+SGRKKKPS
Subjt:  FVLFFYVFIYLYKRGMRTRPQVLKRLSESGRKKKPS

A0A6J1DL16 uncharacterized protein LOC111021515

2.0e-135

99.58

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Query:  STPKQDFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTS
        STPKQDFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTS
Subjt:  STPKQDFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTS

Query:  RIKCLADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVL
        RIKCLADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQG+EVRTSWFYIVISILTVL
Subjt:  RIKCLADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVL

Query:  FVLFFYVFIYLYKRGMRTRPQVLKRLSESGRKKKPS
        FVLFFYVFIYLYKRGMRTRPQVLKRLSESGRKKKPS
Subjt:  FVLFFYVFIYLYKRGMRTRPQVLKRLSESGRKKKPS

A0A6J1F459 uncharacterized protein LOC111441996

3.6e-121

87.29

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Query:  STPKQDFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTS
        STPKQD NNAHEVHCSRERSR AWKIIEEYLMPF++K++YK+ST CRLHPDNDMFRDQEQHKSHLDFN+WKCGYC+K+FYEEKYLDQHF NRHYDLLN S
Subjt:  STPKQDFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTS

Query:  RIKCLADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVL
        R KCLAD CGALHCDRV++T+SQKSKCNPAAAAR KHMCE LADSCFP+ +GASASHLHEFFLRQFCDAHTCSGKPKPFS+GR+VRTS FYIVIS+LTV+
Subjt:  RIKCLADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVL

Query:  FVLFFYVFIYLYKRGMRTRPQVLKRLSESGRKKKPS
        FVLFFYVFIYLYKRGMRTRPQVLKRLS+SG KKKPS
Subjt:  FVLFFYVFIYLYKRGMRTRPQVLKRLSESGRKKKPS

A0A6J1J0Y1 uncharacterized protein LOC111482459

3.6e-121

87.71

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Query:  STPKQDFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTS
        STPKQD NNAHEVHCSRERSR AWKIIEEYLMPFV+K++YKIST CRLHPDNDMFRDQEQHKSHLDFN+WKCGYC+K+FYEEKYLDQHF NRHYDLLN S
Subjt:  STPKQDFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTS

Query:  RIKCLADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVL
        R KCLAD CGALHCDRV++++SQKSKCNPAAAAR KHMCE LADSCFP+ +GASASHLHEFFLRQFCDAHTCSGKPKPFS+GR+VRTS FYIVIS+LTV+
Subjt:  RIKCLADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVL

Query:  FVLFFYVFIYLYKRGMRTRPQVLKRLSESGRKKKPS
        FVLFFYVFIYLYKRGMRTRPQVLKRLS+SG KKKPS
Subjt:  FVLFFYVFIYLYKRGMRTRPQVLKRLSESGRKKKPS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G40710.1 zinc finger (C2H2 type) family protein

3.1e-85

62.22

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Query:  HEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTSRIKCLADVCG
        HE+HCSRERSRVAWKII+EYLMP+V K +Y++ + CR+H DND++R+QE+HK   D NEW+CG+C+K FYEEKYLD+HFD+RHY+LLN S  KCL+D+CG
Subjt:  HEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTSRIKCLADVCG

Query:  ALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVLFVLFFYVFIY
        ALHCD VV+T   KSKCNPAAAA+ +H+CE LA+SCFPV +G+SA+ LH+FFLRQFCDAHTCSG  KP SQ +  + S  YI+ SI+ ++ +L +Y F+Y
Subjt:  ALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVLFVLFFYVFIY

Query:  LYKRGMRTRPQVLKRLSESGRKKKP
        L++RG++ R Q LKR+  +G KKKP
Subjt:  LYKRGMRTRPQVLKRLSESGRKKKP

AT5G63280.1 C2H2-like zinc finger protein

3.3e-82

58.01

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Query:  DFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTSRIKCL
        + +NA E+HCSRERSR AW+II++YL PFV + +Y+I  +CRLHPDND++RDQE HK H+D  EWKCGYC+K F +EK+LD+HF  RHY+LLNT+  KCL
Subjt:  DFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTSRIKCL

Query:  ADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVLFVLFF
        AD+CGALHCD V+ +   KSKCNP A A+ +H+CE +A+SCFPV++G SAS LHE FLRQFCDAHTC+G  KPF +G + ++  FY+ ISILT++ +  F
Subjt:  ADVCGALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVLFVLFF

Query:  YVFIYLYKRGMRTRPQVLKRLSESGRKKKPS
        Y+ ++L++R  R+  Q L+R+ +SG+K KPS
Subjt:  YVFIYLYKRGMRTRPQVLKRLSESGRKKKPS

Sequences

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CDS sequence

Show/hide CDS sequence

AGTACTCCAAAGCAGGATTTCAACAATGCTCATGAGGTACACTGCTCGAGAGAAAGGAGTCGGGTAGCATGGAAAATAATTGAGGAGTATCTAATGCCCTTTGTGAACAA
AAGGAAATACAAGATTTCTACCGATTGTAGGCTTCACCCCGATAACGACATGTTCAGAGATCAAGAACAGCACAAGAGCCATCTAGATTTTAATGAATGGAAGTGTGGAT
ATTGTAGAAAAAGATTTTATGAAGAGAAGTATCTTGATCAACATTTTGACAACAGGCACTATGATTTGCTCAACACGAGTCGTATCAAGTGCTTGGCGGATGTCTGTGGC
GCATTGCATTGTGACCGTGTGGTAGAAACAGTATCACAGAAAAGTAAATGCAATCCTGCTGCTGCTGCAAGAAAAAAGCATATGTGTGAGGTTCTAGCTGACAGTTGTTT
TCCCGTTGCCGAGGGTGCTTCGGCCAGCCATCTTCACGAATTCTTCTTGCGCCAATTCTGTGATGCACACACTTGTAGCGGAAAGCCAAAACCTTTTTCCCAAGGTCGAG
AGGTTAGGACAAGTTGGTTCTACATTGTTATTTCGATTTTGACAGTCCTATTTGTGCTGTTTTTTTATGTCTTCATTTATTTGTACAAGAGGGGAATGAGAACGAGACCG
CAGGTGCTGAAGCGCCTCTCGGAAAGTGGAAGAAAGAAAAAACCTTCA

mRNA sequence

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Protein sequence

Show/hide protein sequence

STPKQDFNNAHEVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWKCGYCRKRFYEEKYLDQHFDNRHYDLLNTSRIKCLADVCG
ALHCDRVVETVSQKSKCNPAAAARKKHMCEVLADSCFPVAEGASASHLHEFFLRQFCDAHTCSGKPKPFSQGREVRTSWFYIVISILTVLFVLFFYVFIYLYKRGMRTRP
QVLKRLSESGRKKKPS

MS009786 (gene) of Bitter gourd (TR) v1 genome