; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS009794 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009794
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description54S ribosomal protein L37, mitochondrial-like
Genome locationscaffold173:337984..338376
RNA-Seq ExpressionMS009794
SyntenyMS009794
Gene Ontology termsGO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR013870 - Ribosomal protein L37, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154133.1 54S ribosomal protein L37, mitochondrial-like [Momordica charantia]9.7e-6298.47Show/hide
Query:  MAMSQTRLFRSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRRKN
        MAMSQ+RLFRSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADP VMADSEYPDWLWRLIDKHPALSELRRKN
Subjt:  MAMSQTRLFRSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRRKN

Query:  VEALPYEDLKRFVKLDNRASIKENNSIKAKN
        VEALPYEDLKRFVKLDNRASIKENNSIKAKN
Subjt:  VEALPYEDLKRFVKLDNRASIKENNSIKAKN

XP_022928329.1 54S ribosomal protein L37, mitochondrial-like [Cucurbita moschata]7.2e-4982.71Show/hide
Query:  MAMSQTRLF-RSIINAKDAIKVTSVRTFAAGGKKKGSK-GGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRR
        MAMSQ RL  RS++N KD IK+T+VRTFAAGGKKKGSK GGAA D PKASILSKEVKS+TVVGANILKEGADP VMADSEYPDWLWRLIDK PALSEL+R
Subjt:  MAMSQTRLF-RSIINAKDAIKVTSVRTFAAGGKKKGSK-GGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRR

Query:  KNVEALPYEDLKRFVKLDNRASIKENNSIKAKN
        K+ + LPYEDLKRFVKLD RA IKENNS KAKN
Subjt:  KNVEALPYEDLKRFVKLDNRASIKENNSIKAKN

XP_022989738.1 54S ribosomal protein L37, mitochondrial-like [Cucurbita maxima]1.5e-5184.85Show/hide
Query:  MAMSQTRLF-RSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRRK
        MAMSQ RLF RS++N KD IK+T+VRTFAAGGKKKGSKGGAA D PKASILSKEVKS+TVVGANILKEGADP VMADSEYPDWLWRLIDK PALSELRRK
Subjt:  MAMSQTRLF-RSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRRK

Query:  NVEALPYEDLKRFVKLDNRASIKENNSIKAKN
        + + LPYEDLKRFVKLD RA IKENNS KAKN
Subjt:  NVEALPYEDLKRFVKLDNRASIKENNSIKAKN

XP_038883606.1 39S ribosomal protein L54, mitochondrial isoform X1 [Benincasa hispida]3.2e-4982.71Show/hide
Query:  MAMSQTRLF-RSIINAKDAIKVTSVRTFAAGGK-KKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRR
        M MSQ RLF RSI+N+KD I++TSVRTFAAGGK KKGSKGGAAAD PKAS LSKEVKS+TVVGANILKEGADP +MADSEYP WLW L+DKHP LSELRR
Subjt:  MAMSQTRLF-RSIINAKDAIKVTSVRTFAAGGK-KKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRR

Query:  KNVEALPYEDLKRFVKLDNRASIKENNSIKAKN
        KNVE LPY DLKRFVKLD RA IKENNS KAKN
Subjt:  KNVEALPYEDLKRFVKLDNRASIKENNSIKAKN

XP_038883607.1 54S ribosomal protein L37, mitochondrial isoform X2 [Benincasa hispida]3.2e-4982.71Show/hide
Query:  MAMSQTRLF-RSIINAKDAIKVTSVRTFAAGGK-KKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRR
        M MSQ RLF RSI+N+KD I++TSVRTFAAGGK KKGSKGGAAAD PKAS LSKEVKS+TVVGANILKEGADP +MADSEYP WLW L+DKHP LSELRR
Subjt:  MAMSQTRLF-RSIINAKDAIKVTSVRTFAAGGK-KKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRR

Query:  KNVEALPYEDLKRFVKLDNRASIKENNSIKAKN
        KNVE LPY DLKRFVKLD RA IKENNS KAKN
Subjt:  KNVEALPYEDLKRFVKLDNRASIKENNSIKAKN

TrEMBL top hitse value%identityAlignment
A0A6J1DJG1 54S ribosomal protein L37, mitochondrial-like4.7e-6298.47Show/hide
Query:  MAMSQTRLFRSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRRKN
        MAMSQ+RLFRSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADP VMADSEYPDWLWRLIDKHPALSELRRKN
Subjt:  MAMSQTRLFRSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRRKN

Query:  VEALPYEDLKRFVKLDNRASIKENNSIKAKN
        VEALPYEDLKRFVKLDNRASIKENNSIKAKN
Subjt:  VEALPYEDLKRFVKLDNRASIKENNSIKAKN

A0A6J1EKI4 54S ribosomal protein L37, mitochondrial-like3.5e-4982.71Show/hide
Query:  MAMSQTRLF-RSIINAKDAIKVTSVRTFAAGGKKKGSK-GGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRR
        MAMSQ RL  RS++N KD IK+T+VRTFAAGGKKKGSK GGAA D PKASILSKEVKS+TVVGANILKEGADP VMADSEYPDWLWRLIDK PALSEL+R
Subjt:  MAMSQTRLF-RSIINAKDAIKVTSVRTFAAGGKKKGSK-GGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRR

Query:  KNVEALPYEDLKRFVKLDNRASIKENNSIKAKN
        K+ + LPYEDLKRFVKLD RA IKENNS KAKN
Subjt:  KNVEALPYEDLKRFVKLDNRASIKENNSIKAKN

A0A6J1JQ61 54S ribosomal protein L37, mitochondrial-like7.5e-5284.85Show/hide
Query:  MAMSQTRLF-RSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRRK
        MAMSQ RLF RS++N KD IK+T+VRTFAAGGKKKGSKGGAA D PKASILSKEVKS+TVVGANILKEGADP VMADSEYPDWLWRLIDK PALSELRRK
Subjt:  MAMSQTRLF-RSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRRK

Query:  NVEALPYEDLKRFVKLDNRASIKENNSIKAKN
        + + LPYEDLKRFVKLD RA IKENNS KAKN
Subjt:  NVEALPYEDLKRFVKLDNRASIKENNSIKAKN

A0A7J6DU88 Uncharacterized protein1.9e-4780.15Show/hide
Query:  MAMSQTRLFRSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRRKN
        MAM+  RLFRS I   D +     RTFAAG KKKG+KGGAA D PKASILSKEVKSSTVVGANILKEGADP V+ADSEYPDWL+ LIDK PALSELRR+N
Subjt:  MAMSQTRLFRSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRRKN

Query:  VEALPYEDLKRFVKLDNRASIKENNSIKAKN
        VE LPYEDLKRFVKLDNRA IKENNSIKAKN
Subjt:  VEALPYEDLKRFVKLDNRASIKENNSIKAKN

A0A7J6EZF4 Uncharacterized protein1.9e-4780.15Show/hide
Query:  MAMSQTRLFRSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRRKN
        MAM+  RLFRS I   D +     RTFAAG KKKG+KGGAA D PKASILSKEVKSSTVVGANILKEGADP V+ADSEYPDWL+ LIDK PALSELRR+N
Subjt:  MAMSQTRLFRSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRRKN

Query:  VEALPYEDLKRFVKLDNRASIKENNSIKAKN
        VE LPYEDLKRFVKLDNRA IKENNSIKAKN
Subjt:  VEALPYEDLKRFVKLDNRASIKENNSIKAKN

SwissProt top hitse value%identityAlignment
Q9CPW3 39S ribosomal protein L54, mitochondrial9.5e-0440.91Show/hide
Query:  SVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSST--VVGANILKEGADPNVMADSEYPDWLWRL
        S+R +A     KG KGG AA+  K   +  +    T   +G NI KEG D  + ADSEYP WL+++
Subjt:  SVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSST--VVGANILKEGADPNVMADSEYPDWLWRL

Arabidopsis top hitse value%identityAlignment
AT3G01740.1 Mitochondrial ribosomal protein L371.1e-3967.5Show/hide
Query:  NAKDAIKVTSVRTFAAGGK--KKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRRKNVEALPYEDLKR
        ++KD ++    RTFAA     KKG KGG A+D PK S L+KE+KS+TVVGAN LK+G+DP ++ DS+YPDWLW L+DK PALSELRRKNVE LPY+DLKR
Subjt:  NAKDAIKVTSVRTFAAGGK--KKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRRKNVEALPYEDLKR

Query:  FVKLDNRASIKENNSIKAKN
        FVKLD R  IKENNSIKAKN
Subjt:  FVKLDNRASIKENNSIKAKN

AT5G14290.1 Mitochondrial ribosomal protein L372.4e-3459.85Show/hide
Query:  MSQTRLF-RSIINAKDAIKVTSVRTF--AAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRRK
        M+  R+F  SI  +KD ++    RTF  AAG  KK  +G    D PKAS LSKE+KSS VV AN LK+G DP ++ +S++PD+LW L+DK PALSELRRK
Subjt:  MSQTRLF-RSIINAKDAIKVTSVRTF--AAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRRK

Query:  NVEALPYEDLKRFVKLDNRASIKENNSIKAKN
        NVE L ++DLKRFVKLD RA IKEN+SIKAKN
Subjt:  NVEALPYEDLKRFVKLDNRASIKENNSIKAKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGAGCCAAACTAGATTATTTAGAAGCATTATCAATGCCAAAGATGCAATCAAAGTGACGTCTGTGAGAACATTTGCTGCTGGAGGTAAAAAGAAGGGCTCTAA
AGGCGGTGCGGCTGCTGATGGTCCTAAAGCATCAATTCTAAGTAAAGAGGTCAAGTCTTCCACTGTTGTTGGTGCCAATATTCTCAAGGAAGGTGCAGATCCAAATGTTA
TGGCAGACTCGGAGTACCCCGATTGGCTGTGGCGTTTGATCGATAAACATCCAGCTCTGAGTGAATTACGCAGGAAGAATGTCGAAGCCCTTCCCTACGAGGATCTGAAA
CGATTCGTTAAACTGGATAATCGAGCAAGTATTAAGGAAAACAACTCTATTAAGGCCAAGAAT
mRNA sequenceShow/hide mRNA sequence
ATGGCTATGAGCCAAACTAGATTATTTAGAAGCATTATCAATGCCAAAGATGCAATCAAAGTGACGTCTGTGAGAACATTTGCTGCTGGAGGTAAAAAGAAGGGCTCTAA
AGGCGGTGCGGCTGCTGATGGTCCTAAAGCATCAATTCTAAGTAAAGAGGTCAAGTCTTCCACTGTTGTTGGTGCCAATATTCTCAAGGAAGGTGCAGATCCAAATGTTA
TGGCAGACTCGGAGTACCCCGATTGGCTGTGGCGTTTGATCGATAAACATCCAGCTCTGAGTGAATTACGCAGGAAGAATGTCGAAGCCCTTCCCTACGAGGATCTGAAA
CGATTCGTTAAACTGGATAATCGAGCAAGTATTAAGGAAAACAACTCTATTAAGGCCAAGAAT
Protein sequenceShow/hide protein sequence
MAMSQTRLFRSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRRKNVEALPYEDLK
RFVKLDNRASIKENNSIKAKN