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MS009804 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009804
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDDE Tnp4 domain-containing protein
Genome locationscaffold173:416905..417143
RNA-Seq ExpressionMS009804
SyntenyMS009804
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TQD80013.1 hypothetical protein C1H46_034426 [Malus baccata]4.0e-1857.47Show/hide
Query:  MDIRTFYKLYTLL-------RIENVTIEEMVAIFLHLLAHHVKNRVIS-HFKRSGRTISRYFHKCLKAIIRCQKYFWKTPEPILKHS
        MD R+F++L  +L          NV+IEEMVA FL+++AHH+KNR I+ HF+RSGRTIS+YFH+C+KA+IRCQK FW+ PEPI ++S
Subjt:  MDIRTFYKLYTLL-------RIENVTIEEMVAIFLHLLAHHVKNRVIS-HFKRSGRTISRYFHKCLKAIIRCQKYFWKTPEPILKHS

VVA31425.1 PREDICTED: ALP1 [Prunus dulcis]1.2e-1758.62Show/hide
Query:  MDIRTFYKLYTLL-------RIENVTIEEMVAIFLHLLAHHVKNRVISH-FKRSGRTISRYFHKCLKAIIRCQKYFWKTPEPILKHS
        MD ++F+KL  +L          NV++EEM+A+FLH+LAHH+KNR I + F RSGRTIS+YFH+ LKA+IRCQK FWKT EPIL++S
Subjt:  MDIRTFYKLYTLL-------RIENVTIEEMVAIFLHLLAHHVKNRVISH-FKRSGRTISRYFHKCLKAIIRCQKYFWKTPEPILKHS

XP_011464621.1 PREDICTED: uncharacterized protein LOC105351565 [Fragaria vesca subsp. vesca]5.2e-1862.07Show/hide
Query:  MDIRTFYKLYTLLRIE-------NVTIEEMVAIFLHLLAHHVKNRVIS-HFKRSGRTISRYFHKCLKAIIRCQKYFWKTPEPILKHS
        MD  +F+KL  +L  +       NV+IEEMVA+FL+ LAHH KNRVI  +F RSGRT+S+YFH+CLKAIIRCQK FWKTPEPI + S
Subjt:  MDIRTFYKLYTLLRIE-------NVTIEEMVAIFLHLLAHHVKNRVIS-HFKRSGRTISRYFHKCLKAIIRCQKYFWKTPEPILKHS

XP_021808928.1 protein ALP1-like [Prunus avium]4.2e-2060.92Show/hide
Query:  MDIRTFYKLYTLL-------RIENVTIEEMVAIFLHLLAHHVKNRVISH-FKRSGRTISRYFHKCLKAIIRCQKYFWKTPEPILKHS
        MD ++F+KL  +L          NV++EEM+A+FLH+LAHH+KNR I + F RSGRTIS+YFH+CLKA+IRCQK FWKTPEPIL++S
Subjt:  MDIRTFYKLYTLL-------RIENVTIEEMVAIFLHLLAHHVKNRVISH-FKRSGRTISRYFHKCLKAIIRCQKYFWKTPEPILKHS

XP_024156096.1 protein ALP1-like [Rosa chinensis]6.7e-1858.62Show/hide
Query:  MDIRTFYKLYTLL-------RIENVTIEEMVAIFLHLLAHHVKNRVIS-HFKRSGRTISRYFHKCLKAIIRCQKYFWKTPEPILKHS
        MD ++F+KL  +L          NV+IEEMVA+FL++LAHH KNR I+ +F RSGRT+S+YFH+CLKA+IRC+K FWKTPEP+L+ S
Subjt:  MDIRTFYKLYTLL-------RIENVTIEEMVAIFLHLLAHHVKNRVIS-HFKRSGRTISRYFHKCLKAIIRCQKYFWKTPEPILKHS

TrEMBL top hitse value%identityAlignment
A0A4Y1QKY9 Uncharacterized protein2.1e-1757.47Show/hide
Query:  MDIRTFYKLYTLL-------RIENVTIEEMVAIFLHLLAHHVKNRVIS-HFKRSGRTISRYFHKCLKAIIRCQKYFWKTPEPILKHS
        MD ++F+KL  +L          N++ EEMVAIFL++LAHH KNRVI  +F RSGRT+S+YFH+CLKA+IRCQK FWK+PEP+ ++S
Subjt:  MDIRTFYKLYTLL-------RIENVTIEEMVAIFLHLLAHHVKNRVIS-HFKRSGRTISRYFHKCLKAIIRCQKYFWKTPEPILKHS

A0A4Y1RBD7 Uncharacterized protein2.1e-1757.47Show/hide
Query:  MDIRTFYKLYTLL-------RIENVTIEEMVAIFLHLLAHHVKNRVIS-HFKRSGRTISRYFHKCLKAIIRCQKYFWKTPEPILKHS
        MD ++F+KL  +L          N++ EEMVAIFL++LAHH KNRVI  +F RSGRT+S+YFH+CLKA+IRCQK FWK+PEP+ ++S
Subjt:  MDIRTFYKLYTLL-------RIENVTIEEMVAIFLHLLAHHVKNRVIS-HFKRSGRTISRYFHKCLKAIIRCQKYFWKTPEPILKHS

A0A540L0K6 DDE Tnp4 domain-containing protein1.9e-1857.47Show/hide
Query:  MDIRTFYKLYTLL-------RIENVTIEEMVAIFLHLLAHHVKNRVIS-HFKRSGRTISRYFHKCLKAIIRCQKYFWKTPEPILKHS
        MD R+F++L  +L          NV+IEEMVA FL+++AHH+KNR I+ HF+RSGRTIS+YFH+C+KA+IRCQK FW+ PEPI ++S
Subjt:  MDIRTFYKLYTLL-------RIENVTIEEMVAIFLHLLAHHVKNRVIS-HFKRSGRTISRYFHKCLKAIIRCQKYFWKTPEPILKHS

A0A5E4FV61 PREDICTED: ALP15.6e-1858.62Show/hide
Query:  MDIRTFYKLYTLL-------RIENVTIEEMVAIFLHLLAHHVKNRVISH-FKRSGRTISRYFHKCLKAIIRCQKYFWKTPEPILKHS
        MD ++F+KL  +L          NV++EEM+A+FLH+LAHH+KNR I + F RSGRTIS+YFH+ LKA+IRCQK FWKT EPIL++S
Subjt:  MDIRTFYKLYTLL-------RIENVTIEEMVAIFLHLLAHHVKNRVISH-FKRSGRTISRYFHKCLKAIIRCQKYFWKTPEPILKHS

A0A6P5S572 protein ALP1-like2.0e-2060.92Show/hide
Query:  MDIRTFYKLYTLL-------RIENVTIEEMVAIFLHLLAHHVKNRVISH-FKRSGRTISRYFHKCLKAIIRCQKYFWKTPEPILKHS
        MD ++F+KL  +L          NV++EEM+A+FLH+LAHH+KNR I + F RSGRTIS+YFH+CLKA+IRCQK FWKTPEPIL++S
Subjt:  MDIRTFYKLYTLL-------RIENVTIEEMVAIFLHLLAHHVKNRVISH-FKRSGRTISRYFHKCLKAIIRCQKYFWKTPEPILKHS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATACGAACCTTTTATAAGTTATATACTCTCCTTAGGATTGAGAATGTGACCATAGAAGAAATGGTTGCAATATTTTTGCATCTTTTAGCACACCATGTTAAAAA
TAGAGTTATAAGTCACTTTAAGAGATCTGGACGAACCATTAGTAGATACTTCCATAAATGTCTAAAAGCTATTATTCGATGCCAAAAATATTTTTGGAAGACGCCTGAGC
CAATTTTGAAACACTCT
mRNA sequenceShow/hide mRNA sequence
ATGGATATACGAACCTTTTATAAGTTATATACTCTCCTTAGGATTGAGAATGTGACCATAGAAGAAATGGTTGCAATATTTTTGCATCTTTTAGCACACCATGTTAAAAA
TAGAGTTATAAGTCACTTTAAGAGATCTGGACGAACCATTAGTAGATACTTCCATAAATGTCTAAAAGCTATTATTCGATGCCAAAAATATTTTTGGAAGACGCCTGAGC
CAATTTTGAAACACTCT
Protein sequenceShow/hide protein sequence
MDIRTFYKLYTLLRIENVTIEEMVAIFLHLLAHHVKNRVISHFKRSGRTISRYFHKCLKAIIRCQKYFWKTPEPILKHS