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MS009825 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009825
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold173:534928..535230
RNA-Seq ExpressionMS009825
SyntenyMS009825
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042928.1 hypothetical protein E6C27_scaffold44G004520 [Cucumis melo var. makuwa]4.1e-2870.19Show/hide
Query:  MEANSRKRKGFMKGKLMPLYKQYSGSKTKQSGLVGYVFHQD---YTISQHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPDEGVDLKAANYISSTL
        MEAN RK +GFMKGKLMP YKQY+GSKTKQ+GLVGYVFH++      SQH ++ LVQ+ +  RDTT ATR SLSQ D+ YGI  DEGVD+KAANYISSTL
Subjt:  MEANSRKRKGFMKGKLMPLYKQYSGSKTKQSGLVGYVFHQD---YTISQHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPDEGVDLKAANYISSTL

Query:  ARFK
        ARFK
Subjt:  ARFK

KAE8650773.1 hypothetical protein Csa_017653 [Cucumis sativus]6.4e-2162.38Show/hide
Query:  MEANSRKRKGFMKGKLMPLYKQYSGSKTKQSGLVGYVFHQDYTISQHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPDEGVDLKAANYISSTLARF
        MEAN RK +GFM+GKLMP YKQY+GSKTKQ+GL                         GRDTT ATRDSLSQFD  YGI  DEGVD+KAANYISSTLARF
Subjt:  MEANSRKRKGFMKGKLMPLYKQYSGSKTKQSGLVGYVFHQDYTISQHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPDEGVDLKAANYISSTLARF

Query:  K
        K
Subjt:  K

KAG6588895.1 hypothetical protein SDJN03_17460, partial [Cucurbita argyrosperma subsp. sororia]4.0e-2370.59Show/hide
Query:  MPLYKQYSGSKTKQSGLVGYVFHQDYTISQHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPDEGVDLKAANYISSTLARFK
        MP YKQY G+KTK +GLVGYVFH+DY IS H V+ LV E + G D T  TRDSL+QFDN YGI  DEG+D+KAANYISSTLARFK
Subjt:  MPLYKQYSGSKTKQSGLVGYVFHQDYTISQHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPDEGVDLKAANYISSTLARFK

KAG7022660.1 hypothetical protein SDJN02_16394, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-1464.29Show/hide
Query:  MPLYKQYSGSKTKQSGLVGYVFHQDYTISQHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPDEGVD
        MP YKQY G+KTK +GLVGYVFH+DY IS H V+ LV E + G D T  TRDSL+QFD+ YGI  DEG+D
Subjt:  MPLYKQYSGSKTKQSGLVGYVFHQDYTISQHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPDEGVD

XP_012070196.1 uncharacterized protein LOC105632422 [Jatropha curcas]7.6e-1451.28Show/hide
Query:  MEANSRKRKGFMKGKLMPLYK--------QYSGSKTKQS------GLVGYVFHQDYTIS--QHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPDEG
        ME+N RKR+GFMKGKL+P Y+        QYS SK K S        VG+V HQDY I+  + KVSF+V      RD        LSQFD  YG+A DEG
Subjt:  MEANSRKRKGFMKGKLMPLYK--------QYSGSKTKQS------GLVGYVFHQDYTIS--QHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPDEG

Query:  VDLKAANYISSTLARFK
        VD+KAA YISS   RFK
Subjt:  VDLKAANYISSTLARFK

TrEMBL top hitse value%identityAlignment
A0A067LN74 Uncharacterized protein3.7e-1451.28Show/hide
Query:  MEANSRKRKGFMKGKLMPLYK--------QYSGSKTKQS------GLVGYVFHQDYTIS--QHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPDEG
        ME+N RKR+GFMKGKL+P Y+        QYS SK K S        VG+V HQDY I+  + KVSF+V      RD        LSQFD  YG+A DEG
Subjt:  MEANSRKRKGFMKGKLMPLYK--------QYSGSKTKQS------GLVGYVFHQDYTIS--QHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPDEG

Query:  VDLKAANYISSTLARFK
        VD+KAA YISS   RFK
Subjt:  VDLKAANYISSTLARFK

A0A0A0LVE7 Uncharacterized protein7.3e-3172.82Show/hide
Query:  MEANSRKRKGFMKGKLMPLYKQYSGSKTKQSGLVGYVFHQD--YTISQHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPDEGVDLKAANYISSTLA
        MEAN RK +GFM+GKLMP YKQY+GSKTKQ+GLVGYVFH++   ++SQH +  LVQ+   GRDTT ATRDSLSQFD  YGI  DEGVD+KAANYISSTLA
Subjt:  MEANSRKRKGFMKGKLMPLYKQYSGSKTKQSGLVGYVFHQD--YTISQHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPDEGVDLKAANYISSTLA

Query:  RFK
        RFK
Subjt:  RFK

A0A2C9U7Q7 Uncharacterized protein2.0e-1245.38Show/hide
Query:  MEANSRKRKGFMKGKLMPLYK---------QYSGSKTKQSGL------VGYVFHQDYTIS---QHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPD
        ME+N RKR+GFMKGKLMP Y+         QY+    K S        VG+  HQDY I+   Q+KVSF++     G       R+ L+QFD  YG+  D
Subjt:  MEANSRKRKGFMKGKLMPLYK---------QYSGSKTKQSGL------VGYVFHQDYTIS---QHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPD

Query:  EGVDLKAANYISSTLARFK
        E VD+KAA+YISS   RFK
Subjt:  EGVDLKAANYISSTLARFK

A0A5D3C0J6 Uncharacterized protein2.0e-2870.19Show/hide
Query:  MEANSRKRKGFMKGKLMPLYKQYSGSKTKQSGLVGYVFHQD---YTISQHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPDEGVDLKAANYISSTL
        MEAN RK +GFMKGKLMP YKQY+GSKTKQ+GLVGYVFH++      SQH ++ LVQ+ +  RDTT ATR SLSQ D+ YGI  DEGVD+KAANYISSTL
Subjt:  MEANSRKRKGFMKGKLMPLYKQYSGSKTKQSGLVGYVFHQD---YTISQHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPDEGVDLKAANYISSTL

Query:  ARFK
        ARFK
Subjt:  ARFK

A0A6A6LUB7 Uncharacterized protein4.0e-1345Show/hide
Query:  MEANSRKRKGFMKGKLMPLYK---------QYSGSK-------TKQSGLVGYVFHQDYTIS---QHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAP
        ME+N RKR+GFMKGKLMP Y+         QY+ SK       +  +  VG+  HQDY I+   Q+KVSF++           + RD L+QFD  YG+  
Subjt:  MEANSRKRKGFMKGKLMPLYK---------QYSGSK-------TKQSGLVGYVFHQDYTIS---QHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAP

Query:  DEGVDLKAANYISSTLARFK
        DE VD+KAA+YISS   RFK
Subjt:  DEGVDLKAANYISSTLARFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCAAATAGCCGAAAGCGCAAAGGGTTCATGAAAGGGAAGTTGATGCCTTTGTACAAGCAATATAGTGGGAGCAAGACGAAACAAAGTGGTTTGGTTGGCTATGT
CTTCCATCAGGACTATACTATTTCTCAACACAAAGTTTCTTTTCTAGTTCAAGAGACGAGTGTCGGACGGGATACAACTGGAGCGACTCGTGACTCGTTGAGTCAGTTCG
ATAACCCATATGGAATTGCCCCGGATGAAGGCGTCGACCTCAAGGCTGCAAACTATATTTCTTCAACTCTAGCGCGATTCAAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCAAATAGCCGAAAGCGCAAAGGGTTCATGAAAGGGAAGTTGATGCCTTTGTACAAGCAATATAGTGGGAGCAAGACGAAACAAAGTGGTTTGGTTGGCTATGT
CTTCCATCAGGACTATACTATTTCTCAACACAAAGTTTCTTTTCTAGTTCAAGAGACGAGTGTCGGACGGGATACAACTGGAGCGACTCGTGACTCGTTGAGTCAGTTCG
ATAACCCATATGGAATTGCCCCGGATGAAGGCGTCGACCTCAAGGCTGCAAACTATATTTCTTCAACTCTAGCGCGATTCAAG
Protein sequenceShow/hide protein sequence
MEANSRKRKGFMKGKLMPLYKQYSGSKTKQSGLVGYVFHQDYTISQHKVSFLVQETSVGRDTTGATRDSLSQFDNPYGIAPDEGVDLKAANYISSTLARFK