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MS009862 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009862
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDNA-directed RNA polymerase subunit beta'
Genome locationscaffold173:916883..916981
RNA-Seq ExpressionMS009862
SyntenyMS009862
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABU79845.1 RNA polymerase C, partial [Adiantum venustum]1.0e-0484.85Show/hide
Query:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA
        K+ IVWEILQEVMEGY VLLN+A TLHRLGIQA
Subjt:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA

AWH98273.1 RNA polymerase beta subunit, partial [Odontadenia sp. ITV658]2.1e-0587.88Show/hide
Query:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA
        KKLIVWEILQEVMEG+ VLLN+A TLHRLGIQA
Subjt:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA

AWI72718.1 RNA polymerase beta' subunit [Metastelma northropiae]8.0e-0584.85Show/hide
Query:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA
        KK IVWEILQEVMEG+ VLLN+A TLHRLGIQA
Subjt:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA

YP_009353220.1 RNA polymerase beta [Passiflora edulis]1.0e-0484.85Show/hide
Query:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA
        K+ IVWEILQEVMEGY VLLN+A TLHRLGIQA
Subjt:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA

YP_010116599.1 RNA polymerase beta' subunit [Cakile maritima subsp. baltica]1.0e-0481.82Show/hide
Query:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA
        KKLIVWEILQEVM+G+ VLLN+A TLHRLGIQ+
Subjt:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA

TrEMBL top hitse value%identityAlignment
A0A2S1RF10 DNA-directed RNA polymerase (Fragment)1.0e-0587.88Show/hide
Query:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA
        KKLIVWEILQEVMEG+ VLLN+A TLHRLGIQA
Subjt:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA

A0A2S1UCK5 DNA-directed RNA polymerase subunit beta'3.9e-0584.85Show/hide
Query:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA
        KK IVWEILQEVMEG+ VLLN+A TLHRLGIQA
Subjt:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA

A0A2Z5D582 DNA-directed RNA polymerase subunit beta'5.0e-0584.85Show/hide
Query:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA
        K+ IVWEILQEVMEGY VLLN+A TLHRLGIQA
Subjt:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA

A0A7M1CF63 DNA-directed RNA polymerase subunit beta'5.0e-0584.85Show/hide
Query:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA
        K+ IVWEILQEVMEGY VLLN+A TLHRLGIQA
Subjt:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA

A7XWS1 DNA-directed RNA polymerase (Fragment)5.0e-0584.85Show/hide
Query:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA
        K+ IVWEILQEVMEGY VLLN+A TLHRLGIQA
Subjt:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA

SwissProt top hitse value%identityAlignment
A4QK96 DNA-directed RNA polymerase subunit beta'8.8e-0778.79Show/hide
Query:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA
        KK IVWEILQEVM+G+ VLLN+A TLHRLGIQ+
Subjt:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA

A4QKI3 DNA-directed RNA polymerase subunit beta'8.8e-0778.79Show/hide
Query:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA
        KK IVWEILQEVM+G+ VLLN+A TLHRLGIQ+
Subjt:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA

A4QKS2 DNA-directed RNA polymerase subunit beta'8.8e-0778.79Show/hide
Query:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA
        KK IVWEILQEVM+G+ VLLN+A TLHRLGIQ+
Subjt:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA

A4QL10 DNA-directed RNA polymerase subunit beta'8.8e-0778.79Show/hide
Query:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA
        KK IVWEILQEVM+G+ VLLN+A TLHRLGIQ+
Subjt:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA

P56763 DNA-directed RNA polymerase subunit beta'8.8e-0778.79Show/hide
Query:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA
        KK IVWEILQEVM+G+ VLLN+A TLHRLGIQ+
Subjt:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA

Arabidopsis top hitse value%identityAlignment
ATCG00180.1 DNA-directed RNA polymerase family protein6.3e-0878.79Show/hide
Query:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA
        KK IVWEILQEVM+G+ VLLN+A TLHRLGIQ+
Subjt:  KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAAAACTCATTGTATGGGAAATACTTCAGGAAGTTATGGAGGGTTATCTCGTATTGCTAAATAAAGCGTATACTCTACATAGATTAGGCATCCAAGCG
mRNA sequenceShow/hide mRNA sequence
AAAAAACTCATTGTATGGGAAATACTTCAGGAAGTTATGGAGGGTTATCTCGTATTGCTAAATAAAGCGTATACTCTACATAGATTAGGCATCCAAGCG
Protein sequenceShow/hide protein sequence
KKLIVWEILQEVMEGYLVLLNKAYTLHRLGIQA