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MS009884 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009884
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionHNH domain-containing protein
Genome locationscaffold206:110038..110179
RNA-Seq ExpressionMS009884
SyntenyMS009884
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7838499.1 HNH endonuclease domain-containing protein [Senna tora]5.5e-1269.81Show/hide
Query:  RLTFFDTKAKDICWAKANIVP-------RKDAICNVVCKCFCNCQGCLCFEYD
        R  FFDTKAK +CWAKA+IVP       RKDA  N+VCK FCNCQGCLCFEYD
Subjt:  RLTFFDTKAKDICWAKANIVP-------RKDAICNVVCKCFCNCQGCLCFEYD
RAL53706.1 hypothetical protein DM860_015434 [Cuscuta australis]2.1e-1167.92Show/hide
Query:  RLTFFDTKAKDICWAKANIVP-------RKDAICNVVCKCFCNCQGCLCFEYD
        R  FFDT AK++CWAKA+IVP       RKDA  N+VCK FCNCQGCLCFEYD
Subjt:  RLTFFDTKAKDICWAKANIVP-------RKDAICNVVCKCFCNCQGCLCFEYD
XP_022135260.1 uncharacterized protein LOC111007267 [Momordica charantia]4.2e-1273.58Show/hide
Query:  RLTFFDTKAKDICWAKANIVP-------RKDAICNVVCKCFCNCQGCLCFEYD
        R  FFDTKAK ICWAKA+IVP       RKDA  NVVCK FCNCQGCLCFEYD
Subjt:  RLTFFDTKAKDICWAKANIVP-------RKDAICNVVCKCFCNCQGCLCFEYD
XP_022933741.1 uncharacterized protein LOC111441065 [Cucurbita moschata]1.6e-1171.7Show/hide
Query:  RLTFFDTKAKDICWAKANIVP-------RKDAICNVVCKCFCNCQGCLCFEYD
        R  FFDTKAK ICWAKA+ VP       RKDA  NVVCK FCNCQGCLCFEYD
Subjt:  RLTFFDTKAKDICWAKANIVP-------RKDAICNVVCKCFCNCQGCLCFEYD
XP_023531696.1 uncharacterized protein LOC111793864 [Cucurbita pepo subsp. pepo]1.6e-1171.7Show/hide
Query:  RLTFFDTKAKDICWAKANIVP-------RKDAICNVVCKCFCNCQGCLCFEYD
        R  FFDTKAK ICWAKA+ VP       RKDA  NVVCK FCNCQGCLCFEYD
Subjt:  RLTFFDTKAKDICWAKANIVP-------RKDAICNVVCKCFCNCQGCLCFEYD
TrEMBL top hitse value%identityAlignment
A0A328E8M2 HNHc domain-containing protein1.0e-1167.92Show/hide
Query:  RLTFFDTKAKDICWAKANIVP-------RKDAICNVVCKCFCNCQGCLCFEYD
        R  FFDT AK++CWAKA+IVP       RKDA  N+VCK FCNCQGCLCFEYD
Subjt:  RLTFFDTKAKDICWAKANIVP-------RKDAICNVVCKCFCNCQGCLCFEYD
A0A484LM52 HNHc domain-containing protein1.0e-1167.92Show/hide
Query:  RLTFFDTKAKDICWAKANIVP-------RKDAICNVVCKCFCNCQGCLCFEYD
        R  FFDT AK++CWAKA+IVP       RKDA  N+VCK FCNCQGCLCFEYD
Subjt:  RLTFFDTKAKDICWAKANIVP-------RKDAICNVVCKCFCNCQGCLCFEYD
A0A6J1C0N7 uncharacterized protein LOC1110072672.0e-1273.58Show/hide
Query:  RLTFFDTKAKDICWAKANIVP-------RKDAICNVVCKCFCNCQGCLCFEYD
        R  FFDTKAK ICWAKA+IVP       RKDA  NVVCK FCNCQGCLCFEYD
Subjt:  RLTFFDTKAKDICWAKANIVP-------RKDAICNVVCKCFCNCQGCLCFEYD
A0A6J1EZW3 uncharacterized protein LOC1114410657.7e-1271.7Show/hide
Query:  RLTFFDTKAKDICWAKANIVP-------RKDAICNVVCKCFCNCQGCLCFEYD
        R  FFDTKAK ICWAKA+ VP       RKDA  NVVCK FCNCQGCLCFEYD
Subjt:  RLTFFDTKAKDICWAKANIVP-------RKDAICNVVCKCFCNCQGCLCFEYD
A0A6J1I7G1 uncharacterized protein LOC1114715097.7e-1271.7Show/hide
Query:  RLTFFDTKAKDICWAKANIVP-------RKDAICNVVCKCFCNCQGCLCFEYD
        R  FFDTKAK ICWAKA+ VP       RKDA  NVVCK FCNCQGCLCFEYD
Subjt:  RLTFFDTKAKDICWAKANIVP-------RKDAICNVVCKCFCNCQGCLCFEYD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G18680.1 HNH endonuclease domain-containing protein1.0e-1160.38Show/hide
Query:  RLTFFDTKAKDICWAKANIVP-------RKDAICNVVCKCFCNCQGCLCFEYD
        R  FFD KAK+ CWA A+IVP       RKD   N+VCK F NC GCLCFEYD
Subjt:  RLTFFDTKAKDICWAKANIVP-------RKDAICNVVCKCFCNCQGCLCFEYD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGTCTGACATTTTTCGATACCAAAGCGAAAGACATTTGTTGGGCAAAGGCCAACATTGTCCCACGTAAGGACGCCATCTGTAACGTTGTCTGCAAGTGCTTCTGCAACTG
CCAGGGCTGCCTCTGCTTCGAGTACGAT
mRNA sequenceShow/hide mRNA sequence
CGTCTGACATTTTTCGATACCAAAGCGAAAGACATTTGTTGGGCAAAGGCCAACATTGTCCCACGTAAGGACGCCATCTGTAACGTTGTCTGCAAGTGCTTCTGCAACTG
CCAGGGCTGCCTCTGCTTCGAGTACGAT
Protein sequenceShow/hide protein sequence
RLTFFDTKAKDICWAKANIVPRKDAICNVVCKCFCNCQGCLCFEYD