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MS009889 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009889
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic
Genome locationscaffold206:247193..247282
RNA-Seq ExpressionMS009889
SyntenyMS009889
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAJ85336.1 predicted protein [Hordeum vulgare subsp. vulgare]4.8e-0990Show/hide
Query:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
        CGG GKWKALNRKRAKDIYEF ECPNCYG+
Subjt:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
CAA7400799.1 unnamed protein product [Spirodela intermedia]6.3e-0986.67Show/hide
Query:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
        CGG GKWKALNRKRAKD+YEF ECPNCYG+
Subjt:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
KMZ64984.1 hypothetical protein ZOSMA_33G00120 [Zostera marina]4.8e-0990Show/hide
Query:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
        CGG GKWKALNRKRAKDIYEF ECPNCYG+
Subjt:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
XP_021278509.1 protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X2 [Herrania umbratica]6.3e-0986.67Show/hide
Query:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
        CGG GKWKALNRKRAKD+YEF ECPNCYG+
Subjt:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
XP_026415046.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like [Papaver somniferum]4.8e-0990Show/hide
Query:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
        CGG GKWKALNRKRAKDIYEF ECPNCYG+
Subjt:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
TrEMBL top hitse value%identityAlignment
A0A0K9P7K3 Uncharacterized protein2.3e-0990Show/hide
Query:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
        CGG GKWKALNRKRAKDIYEF ECPNCYG+
Subjt:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
A0A287H356 Uncharacterized protein2.3e-0990Show/hide
Query:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
        CGG GKWKALNRKRAKDIYEF ECPNCYG+
Subjt:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
A0A287H359 Uncharacterized protein2.3e-0990Show/hide
Query:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
        CGG GKWKALNRKRAKDIYEF ECPNCYG+
Subjt:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
A0A4Y7L460 Uncharacterized protein2.3e-0990Show/hide
Query:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
        CGG GKWKALNRKRAKDIYEF ECPNCYG+
Subjt:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
F2CR65 Predicted protein2.3e-0990Show/hide
Query:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
        CGG GKWKALNRKRAKDIYEF ECPNCYG+
Subjt:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
SwissProt top hitse value%identityAlignment
A0A1D6KL43 Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic8.3e-1286.67Show/hide
Query:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
        CGG GKWKALNRKRAKD+YEF ECPNCYG+
Subjt:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
O64750 Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic8.3e-1286.67Show/hide
Query:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
        CGG GKWKALNRKRAKD+YEF ECPNCYG+
Subjt:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
Q6YUA8 Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic7.0e-1183.33Show/hide
Query:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
        CGG GKWKALNRKRAKD+Y F ECPNCYG+
Subjt:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
Arabidopsis top hitse value%identityAlignment
AT2G34860.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein5.9e-1386.67Show/hide
Query:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
        CGG GKWKALNRKRAKD+YEF ECPNCYG+
Subjt:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
AT2G34860.2 DnaJ/Hsp40 cysteine-rich domain superfamily protein5.9e-1386.67Show/hide
Query:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK
        CGG GKWKALNRKRAKD+YEF ECPNCYG+
Subjt:  CGGIGKWKALNRKRAKDIYEFIECPNCYGK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGTGGTGGTATAGGCAAATGGAAAGCTCTGAACAGAAAACGGGCTAAGGATATCTACGAGTTTATAGAATGTCCAAATTGTTATGGTAAA
mRNA sequenceShow/hide mRNA sequence
TGTGGTGGTATAGGCAAATGGAAAGCTCTGAACAGAAAACGGGCTAAGGATATCTACGAGTTTATAGAATGTCCAAATTGTTATGGTAAA
Protein sequenceShow/hide protein sequence
CGGIGKWKALNRKRAKDIYEFIECPNCYGK