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MS009890 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009890
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF4283 domain-containing protein
Genome locationscaffold206:257104..257498
RNA-Seq ExpressionMS009890
SyntenyMS009890
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044449.1 hypothetical protein E6C27_scaffold46G001820 [Cucumis melo var. makuwa]3.2e-1238.33Show/hide
Query:  PIMVDKGLLRFTRDRILKSSELSGRWRKTGNFHIKLEKWSPYLHNRKEFIQVYGGCL---DLPLYYWSRSTFEAIGVHFGGF-KISTKTLNMLEASEAYI
        P   DK LL      + K    +  W   G F++K EKWS   H   + I  YGG      +PL+ W+ +TF  IG  +GGF   + +++N LE +EA I
Subjt:  PIMVDKGLLRFTRDRILKSSELSGRWRKTGNFHIKLEKWSPYLHNRKEFIQVYGGCL---DLPLYYWSRSTFEAIGVHFGGF-KISTKTLNMLEASEAYI

Query:  KVKPNLCGFIPATVTIKDEK
        KVK N  GF+PA + I DE+
Subjt:  KVKPNLCGFIPATVTIKDEK

KAA0056838.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.4e-1232.84Show/hide
Query:  LKEKFSLDCVINPIMVDKGLLRFTRD--RILKSSELSGRWRKTGNFHIKLEKWSPYLHNRKEFIQVYGGCL---DLPLYYWSRSTFEAIGVHFGGF-KIS
        L+++  +     P   DK +L    D  ++L S++ +  W   GN+ +K E W   LH+    I  YGG L    +PL+ W+ +TF+ IG   GGF  ++
Subjt:  LKEKFSLDCVINPIMVDKGLLRFTRD--RILKSSELSGRWRKTGNFHIKLEKWSPYLHNRKEFIQVYGGCL---DLPLYYWSRSTFEAIGVHFGGF-KIS

Query:  TKTLNMLEASEAYIKVKPNLCGFIPATVTIKDEK
         +T+ M +  +A IKV+ N  GF+PA++ I D +
Subjt:  TKTLNMLEASEAYIKVKPNLCGFIPATVTIKDEK

TYJ98837.1 putative 3,4-dihydroxy-2-butanone kinase isoform X5 [Cucumis melo var. makuwa]3.3e-1746.23Show/hide
Query:  RILKSSELSGRWRKTGNFHIKLEKWSPYLHNRKEFIQVYGGCL---DLPLYYWSRSTFEAIGVHFGGF-KISTKTLNMLEASEAYIKVKPNLCGFIPATV
        R+    +  G+W+  GNFH+K+E+W    H+     + YGG L   +LPL YW RST E IG HF G   I+ +TLN+   SEA I+VK NLCGF+P+T+
Subjt:  RILKSSELSGRWRKTGNFHIKLEKWSPYLHNRKEFIQVYGGCL---DLPLYYWSRSTFEAIGVHFGGF-KISTKTLNMLEASEAYIKVKPNLCGFIPATV

Query:  TIKDEK
         I D K
Subjt:  TIKDEK

XP_031738083.1 uncharacterized protein LOC116402658 [Cucumis sativus]3.7e-1356.25Show/hide
Query:  HNRKEFIQVYGGCL---DLPLYYWSRSTFEAIGVHFGGF-KISTKTLNMLEASEAYIKVKPNLCGFIPATVTIKDEKYGS
        H+R   ++ YGG L   +LPL  WSRS FEAIG HFGGF KI+T+TLN+   SEA I+VK NLCGF+ +T  I D K G+
Subjt:  HNRKEFIQVYGGCL---DLPLYYWSRSTFEAIGVHFGGF-KISTKTLNMLEASEAYIKVKPNLCGFIPATVTIKDEKYGS

XP_038904899.1 uncharacterized protein LOC120091119 isoform X2 [Benincasa hispida]5.7e-2245.05Show/hide
Query:  RDRILKSSELSGRWRKTGNFHIKLEKWSPYLHNRKEFIQVYGGCL---DLPLYYWSRSTFEAIGVHFGGFK-ISTKTLNMLEASEAYIKVKPNLCGFIPA
        R+ + +   +SG+W+K G+FH+K E+W+  +H R  +++ YGG +   +LPL YW + TFEAIG +FGG + I+ + LN+++  +A IKVK NLCGF+PA
Subjt:  RDRILKSSELSGRWRKTGNFHIKLEKWSPYLHNRKEFIQVYGGCL---DLPLYYWSRSTFEAIGVHFGGFK-ISTKTLNMLEASEAYIKVKPNLCGFIPA

Query:  TVTIKDEKYGS
        T+ + +EK GS
Subjt:  TVTIKDEKYGS

TrEMBL top hitse value%identityAlignment
A0A5A7T0M9 DUF4283 domain-containing protein1.1e-1034.35Show/hide
Query:  LKEKFSLDCVINPIMVDKGLLRFTRDRILKSSELSGRWRKTGNFHIKLEKWSPYLHNRKEFIQVYGGCLD---LPLYYWSRSTFEAIGVHFGG-FKISTK
        LK++       NP   +K L+ F+  +  KS   + RW     F +K E WS   H  ++ I  YGG +    +P++ W+  TF  IG    G  ++   
Subjt:  LKEKFSLDCVINPIMVDKGLLRFTRDRILKSSELSGRWRKTGNFHIKLEKWSPYLHNRKEFIQVYGGCLD---LPLYYWSRSTFEAIGVHFGG-FKISTK

Query:  TLNMLEASEAYIKVKPNLCGFIPATVTIKDE
        T+NM    EA IKV+ N  GFI AT+ IKD+
Subjt:  TLNMLEASEAYIKVKPNLCGFIPATVTIKDE

A0A5A7T365 Uncharacterized protein1.4e-1043.96Show/hide
Query:  GNFHIKLEKWSPYLHNRKEFIQVYGGCLD---LPLYYWSRSTFEAIGVHFGGF-KISTKTLNMLEASEAYIKVKPNLCGFIPATVTIKDEK
        G    ++ +W    H+R    + YG  L    L L YW RSTFE IG HFGG   I+++TLN+   SEA I+VK  LCGF+P+T+ I + K
Subjt:  GNFHIKLEKWSPYLHNRKEFIQVYGGCLD---LPLYYWSRSTFEAIGVHFGGF-KISTKTLNMLEASEAYIKVKPNLCGFIPATVTIKDEK

A0A5D3BI91 Putative 3,4-dihydroxy-2-butanone kinase isoform X51.6e-1746.23Show/hide
Query:  RILKSSELSGRWRKTGNFHIKLEKWSPYLHNRKEFIQVYGGCL---DLPLYYWSRSTFEAIGVHFGGF-KISTKTLNMLEASEAYIKVKPNLCGFIPATV
        R+    +  G+W+  GNFH+K+E+W    H+     + YGG L   +LPL YW RST E IG HF G   I+ +TLN+   SEA I+VK NLCGF+P+T+
Subjt:  RILKSSELSGRWRKTGNFHIKLEKWSPYLHNRKEFIQVYGGCL---DLPLYYWSRSTFEAIGVHFGGF-KISTKTLNMLEASEAYIKVKPNLCGFIPATV

Query:  TIKDEK
         I D K
Subjt:  TIKDEK

A0A5D3DLT1 DUF4283 domain-containing protein4.4e-1239.67Show/hide
Query:  PIMVDKGLLRFTRDRILKSSELSG-RWRKTGNFHIKLEKWSPYLHNRKEFIQVYGGCL---DLPLYYWSRSTFEAIGVHFGGF-KISTKTLNMLEASEAY
        P   DK LL F +D+ L +       W   G F++K EKWS   H   + I  YGG      +PL+ W+ +TF  IG   GGF   + +++N LE +EA 
Subjt:  PIMVDKGLLRFTRDRILKSSELSG-RWRKTGNFHIKLEKWSPYLHNRKEFIQVYGGCL---DLPLYYWSRSTFEAIGVHFGGF-KISTKTLNMLEASEAY

Query:  IKVKPNLCGFIPATVTIKDEK
        IKVK N  GF+PA + I DE+
Subjt:  IKVKPNLCGFIPATVTIKDEK

A0A6J1D6X4 uncharacterized protein LOC1110181863.4e-1234.62Show/hide
Query:  LKEKFSLDCVINPIMVDKGLLRFTRDRILKSSELSGRWRKTGNFHIKLEKWSPYLHNRKEFIQVYGGCL---DLPLYYWSRSTFEAIGVHFGGF-KISTK
        +KE+     +INP   DK L++     +      +  W   G   +KLE W+P LH R      YG  +   ++PL+ WS +TF+AIG   GGF      
Subjt:  LKEKFSLDCVINPIMVDKGLLRFTRDRILKSSELSGRWRKTGNFHIKLEKWSPYLHNRKEFIQVYGGCL---DLPLYYWSRSTFEAIGVHFGGF-KISTK

Query:  TLNMLEASEAYIKVKPNLCGFIPATVTIKD
            +E  +  IKVK N CGFIPA ++  D
Subjt:  TLNMLEASEAYIKVKPNLCGFIPATVTIKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTAAAAGAAAAATTCTCGCTTGATTGTGTGATTAATCCTATCATGGTGGATAAGGGACTTTTAAGGTTCACCAGAGACAGGATTCTTAAGTCCTCTGAACTTTCGGGTAG
ATGGAGAAAGACTGGAAATTTTCATATAAAATTGGAAAAATGGAGTCCTTACCTGCACAATAGGAAGGAATTCATCCAAGTATATGGTGGGTGCCTGGACTTACCTTTAT
ATTATTGGTCTCGTTCAACTTTCGAAGCCATTGGAGTGCATTTTGGTGGCTTCAAAATCTCTACGAAAACTCTTAATATGTTGGAAGCATCTGAAGCTTACATCAAAGTA
AAACCGAACTTATGTGGTTTTATTCCAGCCACTGTAACGATCAAAGATGAGAAATATGGATCC
mRNA sequenceShow/hide mRNA sequence
TTAAAAGAAAAATTCTCGCTTGATTGTGTGATTAATCCTATCATGGTGGATAAGGGACTTTTAAGGTTCACCAGAGACAGGATTCTTAAGTCCTCTGAACTTTCGGGTAG
ATGGAGAAAGACTGGAAATTTTCATATAAAATTGGAAAAATGGAGTCCTTACCTGCACAATAGGAAGGAATTCATCCAAGTATATGGTGGGTGCCTGGACTTACCTTTAT
ATTATTGGTCTCGTTCAACTTTCGAAGCCATTGGAGTGCATTTTGGTGGCTTCAAAATCTCTACGAAAACTCTTAATATGTTGGAAGCATCTGAAGCTTACATCAAAGTA
AAACCGAACTTATGTGGTTTTATTCCAGCCACTGTAACGATCAAAGATGAGAAATATGGATCC
Protein sequenceShow/hide protein sequence
LKEKFSLDCVINPIMVDKGLLRFTRDRILKSSELSGRWRKTGNFHIKLEKWSPYLHNRKEFIQVYGGCLDLPLYYWSRSTFEAIGVHFGGFKISTKTLNMLEASEAYIKV
KPNLCGFIPATVTIKDEKYGS