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MS009891 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009891
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold206:258770..258940
RNA-Seq ExpressionMS009891
SyntenyMS009891
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH07150.1 TatD related DNase [Prunus dulcis]1.2e-0550.91Show/hide
Query:  LEALFTLEEIKKVVFGFDRNKSPSPDGFSMAFYQDNWEKVKGGSYESLSGFFFRG
        LE  F LEE++K VF   ++KSP PDGFSM+F+Q  WE VKG   + +  FF  G
Subjt:  LEALFTLEEIKKVVFGFDRNKSPSPDGFSMAFYQDNWEKVKGGSYESLSGFFFRG

KAG8473852.1 hypothetical protein CXB51_036001 [Gossypium anomalum]9.5e-0645.61Show/hide
Query:  LEALFTLEEIKKVVFGFDRNKSPSPDGFSMAFYQDNWEKVKGGSYESLSGFFFRGGL
        LE  F++EEIK+ V+ +D NK+P PDGF++ F++  WE VK   +E ++ FF  G L
Subjt:  LEALFTLEEIKKVVFGFDRNKSPSPDGFSMAFYQDNWEKVKGGSYESLSGFFFRGGL

VVA31869.1 Hypothetical predicted protein, partial [Prunus dulcis]1.2e-0550.91Show/hide
Query:  LEALFTLEEIKKVVFGFDRNKSPSPDGFSMAFYQDNWEKVKGGSYESLSGFFFRG
        LE  F LEE++K VF   ++KSP PDGFSM+F+Q  WE VKG   + +  FF  G
Subjt:  LEALFTLEEIKKVVFGFDRNKSPSPDGFSMAFYQDNWEKVKGGSYESLSGFFFRG

XP_030479516.1 uncharacterized protein LOC115696771 [Cannabis sativa]3.3e-0650.94Show/hide
Query:  FTLEEIKKVVFGFDRNKSPSPDGFSMAFYQDNWEKVKGGSYESLSGFFFRGGL
        F++EE+K+VVFG   NK+P PDGFS  F+QDNWE V    Y++++ F   G L
Subjt:  FTLEEIKKVVFGFDRNKSPSPDGFSMAFYQDNWEKVKGGSYESLSGFFFRGGL

XP_039144849.1 uncharacterized protein LOC120282161 [Dioscorea cayenensis subsp. rotundata]3.3e-0652.73Show/hide
Query:  LEALFTLEEIKKVVFGFDRNKSPSPDGFSMAFYQDNWEKVKGGSYESLSGFFFRG
        L+A FTLEEIK  VFG   +K+P PDGF M F+Q  W+ VKGG + +   F F G
Subjt:  LEALFTLEEIKKVVFGFDRNKSPSPDGFSMAFYQDNWEKVKGGSYESLSGFFFRG

TrEMBL top hitse value%identityAlignment
A0A4Y1RS61 TatD related DNase6.0e-0650.91Show/hide
Query:  LEALFTLEEIKKVVFGFDRNKSPSPDGFSMAFYQDNWEKVKGGSYESLSGFFFRG
        LE  F LEE++K VF   ++KSP PDGFSM+F+Q  WE VKG   + +  FF  G
Subjt:  LEALFTLEEIKKVVFGFDRNKSPSPDGFSMAFYQDNWEKVKGGSYESLSGFFFRG

A0A5E4FWN6 Reverse transcriptase domain-containing protein (Fragment)6.0e-0650.91Show/hide
Query:  LEALFTLEEIKKVVFGFDRNKSPSPDGFSMAFYQDNWEKVKGGSYESLSGFFFRG
        LE  F LEE++K VF   ++KSP PDGFSM+F+Q  WE VKG   + +  FF  G
Subjt:  LEALFTLEEIKKVVFGFDRNKSPSPDGFSMAFYQDNWEKVKGGSYESLSGFFFRG

A0A5H2XQW2 TatD related DNase6.0e-0650.91Show/hide
Query:  LEALFTLEEIKKVVFGFDRNKSPSPDGFSMAFYQDNWEKVKGGSYESLSGFFFRG
        LE  F LEE++K VF   ++KSP PDGFSM+F+Q  WE VKG   + +  FF  G
Subjt:  LEALFTLEEIKKVVFGFDRNKSPSPDGFSMAFYQDNWEKVKGGSYESLSGFFFRG

A0A803P5S5 Uncharacterized protein4.6e-0649.02Show/hide
Query:  FTLEEIKKVVFGFDRNKSPSPDGFSMAFYQDNWEKVKGGSYESLSGFFFRG
        +T EE+KK +F    NK+P PDGFS +F+QDNW+ V    YES++ F   G
Subjt:  FTLEEIKKVVFGFDRNKSPSPDGFSMAFYQDNWEKVKGGSYESLSGFFFRG

A0A803QEQ7 Uncharacterized protein2.7e-0650.98Show/hide
Query:  FTLEEIKKVVFGFDRNKSPSPDGFSMAFYQDNWEKVKGGSYESLSGFFFRG
        F++EE+K+VVFG   NK+P PDGFS  F+QDNWE V    Y++++ F   G
Subjt:  FTLEEIKKVVFGFDRNKSPSPDGFSMAFYQDNWEKVKGGSYESLSGFFFRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGGAGGCGCTGTTCACTTTAGAGGAGATTAAAAAGGTGGTATTTGGTTTTGATAGAAATAAATCTCCTAGCCCTGATGGTTTCTCTATGGCATTCTACCAGGATAATTG
GGAGAAAGTTAAAGGAGGATCTTATGAAAGTCTTTCAGGATTTTTTTTTAGAGGGGGATTA
mRNA sequenceShow/hide mRNA sequence
CTGGAGGCGCTGTTCACTTTAGAGGAGATTAAAAAGGTGGTATTTGGTTTTGATAGAAATAAATCTCCTAGCCCTGATGGTTTCTCTATGGCATTCTACCAGGATAATTG
GGAGAAAGTTAAAGGAGGATCTTATGAAAGTCTTTCAGGATTTTTTTTTAGAGGGGGATTA
Protein sequenceShow/hide protein sequence
LEALFTLEEIKKVVFGFDRNKSPSPDGFSMAFYQDNWEKVKGGSYESLSGFFFRGGL