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MS009894 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009894
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionE3 ubiquitin protein ligase
Genome locationscaffold206:261171..261383
RNA-Seq ExpressionMS009894
SyntenyMS009894
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0010390 - histone monoubiquitination (biological process)
GO:0005634 - nucleus (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR013956 - E3 ubiquitin ligase Bre1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010233.1 E3 ubiquitin-protein ligase BRE1-like 2 [Cucurbita argyrosperma subsp. argyrosperma]3.2e-1978.87Show/hide
Query:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV
        RDLVEIKESE  ACSQADVL+SALDEH LE+RVKAANE EAACQQRLS AE EIAEL+ NLDS+ER +L++
Subjt:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV

XP_022153795.1 E3 ubiquitin-protein ligase BRE1-like 2 isoform X1 [Momordica charantia]1.7e-2083.1Show/hide
Query:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV
        R+LVEIKESE  ACSQADVLKSALDEH LE+RVKAANEAEAACQQRLS AETEIAEL+ NLDSSER +L++
Subjt:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV

XP_022153796.1 E3 ubiquitin-protein ligase BRE1-like 2 isoform X2 [Momordica charantia]1.7e-2083.1Show/hide
Query:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV
        R+LVEIKESE  ACSQADVLKSALDEH LE+RVKAANEAEAACQQRLS AETEIAEL+ NLDSSER +L++
Subjt:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV

XP_022153797.1 E3 ubiquitin-protein ligase BRE1-like 2 isoform X3 [Momordica charantia]1.7e-2083.1Show/hide
Query:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV
        R+LVEIKESE  ACSQADVLKSALDEH LE+RVKAANEAEAACQQRLS AETEIAEL+ NLDSSER +L++
Subjt:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV

XP_023513144.1 E3 ubiquitin-protein ligase BRE1-like 2 isoform X3 [Cucurbita pepo subsp. pepo]3.2e-1978.87Show/hide
Query:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV
        RDLVEIKESE  ACSQADVL+SALDEH LE+RVKAANE EAACQQRLS AE EIAEL+ NLDS+ER +L++
Subjt:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV

TrEMBL top hitse value%identityAlignment
A0A6J1DHV2 E3 ubiquitin protein ligase8.2e-2183.1Show/hide
Query:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV
        R+LVEIKESE  ACSQADVLKSALDEH LE+RVKAANEAEAACQQRLS AETEIAEL+ NLDSSER +L++
Subjt:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV

A0A6J1DII2 E3 ubiquitin protein ligase8.2e-2183.1Show/hide
Query:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV
        R+LVEIKESE  ACSQADVLKSALDEH LE+RVKAANEAEAACQQRLS AETEIAEL+ NLDSSER +L++
Subjt:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV

A0A6J1DLS7 E3 ubiquitin protein ligase8.2e-2183.1Show/hide
Query:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV
        R+LVEIKESE  ACSQADVLKSALDEH LE+RVKAANEAEAACQQRLS AETEIAEL+ NLDSSER +L++
Subjt:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV

A0A6J1FTK1 E3 ubiquitin protein ligase1.6e-1978.87Show/hide
Query:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV
        RDLVEIKESE  ACSQADVL+SALDEH LE+RVKAANE EAACQQRLS AE EIAEL+ NLDS+ER +L++
Subjt:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV

A0A6J1FX78 E3 ubiquitin protein ligase1.6e-1978.87Show/hide
Query:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV
        RDLVEIKESE  ACSQADVL+SALDEH LE+RVKAANE EAACQQRLS AE EIAEL+ NLDS+ER +L++
Subjt:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV

SwissProt top hitse value%identityAlignment
A2XW69 E3 ubiquitin-protein ligase BRE1-like 11.0e-0747.89Show/hide
Query:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV
        R+++E ++ E    +    LKS+LDE  LE RVKAANEAEA  QQRL+TAE EIAE    L +S + ++ +
Subjt:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV

A2ZAC2 E3 ubiquitin-protein ligase BRE1-like 28.0e-1356.34Show/hide
Query:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV
        R + EI+ESE  A  QA+ L+  L+EH LE+RVKAANEAE ACQQRLS AE E+ +L+  +D+SER V+++
Subjt:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV

Q336R3 E3 ubiquitin-protein ligase BRE1-like 28.0e-1356.34Show/hide
Query:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV
        R + EI+ESE  A  QA+ L+  L+EH LE+RVKAANEAE ACQQRLS AE E+ +L+  +D+SER V+++
Subjt:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV

Q8RXD6 E3 ubiquitin-protein ligase BRE1-like 13.7e-1054.41Show/hide
Query:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSV
        RD+ E KE E  A +    LKS+LDE  LE+RVKAANEAEA  QQ L+ AE EIA+L+  +D  +R V
Subjt:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSV

Q9C895 E3 ubiquitin-protein ligase BRE1-like 22.5e-1460.56Show/hide
Query:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV
        R L EIK+S+  A +QA+ LK+ LDEH LE+RVKAA+E E+ACQ+RL+TA+ EIAEL+  LD SER VL++
Subjt:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV

Arabidopsis top hitse value%identityAlignment
AT1G55250.1 histone mono-ubiquitination 21.8e-1560.56Show/hide
Query:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV
        R L EIK+S+  A +QA+ LK+ LDEH LE+RVKAA+E E+ACQ+RL+TA+ EIAEL+  LD SER VL++
Subjt:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV

AT1G55250.2 histone mono-ubiquitination 21.8e-1560.56Show/hide
Query:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV
        R L EIK+S+  A +QA+ LK+ LDEH LE+RVKAA+E E+ACQ+RL+TA+ EIAEL+  LD SER VL++
Subjt:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV

AT1G55250.3 histone mono-ubiquitination 21.8e-1560.56Show/hide
Query:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV
        R L EIK+S+  A +QA+ LK+ LDEH LE+RVKAA+E E+ACQ+RL+TA+ EIAEL+  LD SER VL++
Subjt:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV

AT1G55250.4 histone mono-ubiquitination 21.8e-1560.56Show/hide
Query:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV
        R L EIK+S+  A +QA+ LK+ LDEH LE+RVKAA+E E+ACQ+RL+TA+ EIAEL+  LD SER VL++
Subjt:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV

AT2G44950.1 histone mono-ubiquitination 12.6e-1154.41Show/hide
Query:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSV
        RD+ E KE E  A +    LKS+LDE  LE+RVKAANEAEA  QQ L+ AE EIA+L+  +D  +R V
Subjt:  RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGAGACTTGGTGGAAATCAAAGAATCAGAATGCGGAGCTTGCTCTCAGGCTGATGTTTTAAAAAGTGCTTTGGATGAGCATTGCCTTGAAGTGAGAGTGAAAGCTGCTAA
TGAAGCTGAAGCTGCTTGTCAACAACGGCTTTCCACTGCAGAAACTGAAATAGCAGAGTTACAATATAACCTTGATTCCTCAGAGAGGTCTGTTCTCCAGGTT
mRNA sequenceShow/hide mRNA sequence
AGAGACTTGGTGGAAATCAAAGAATCAGAATGCGGAGCTTGCTCTCAGGCTGATGTTTTAAAAAGTGCTTTGGATGAGCATTGCCTTGAAGTGAGAGTGAAAGCTGCTAA
TGAAGCTGAAGCTGCTTGTCAACAACGGCTTTCCACTGCAGAAACTGAAATAGCAGAGTTACAATATAACCTTGATTCCTCAGAGAGGTCTGTTCTCCAGGTT
Protein sequenceShow/hide protein sequence
RDLVEIKESECGACSQADVLKSALDEHCLEVRVKAANEAEAACQQRLSTAETEIAELQYNLDSSERSVLQV