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MS009898 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009898
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRetrotransposon gag protein
Genome locationscaffold206:397712..397840
RNA-Seq ExpressionMS009898
SyntenyMS009898
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061331.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.6e-0569.05Show/hide
Query:  EVNDDKKIHRIIPSRMKRKFSLVINTEGSLKVKQKLIISTNP
        E NDD KIH  +PSRMKRK S+ INTEGSL VK + II TNP
Subjt:  EVNDDKKIHRIIPSRMKRKFSLVINTEGSLKVKQKLIISTNP
TYK08944.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.1e-0569.05Show/hide
Query:  EVNDDKKIHRIIPSRMKRKFSLVINTEGSLKVKQKLIISTNP
        E NDD KIH  +PSRMKRK S+ INTEGSL VK + II TNP
Subjt:  EVNDDKKIHRIIPSRMKRKFSLVINTEGSLKVKQKLIISTNP
TYK09793.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.6e-0569.05Show/hide
Query:  EVNDDKKIHRIIPSRMKRKFSLVINTEGSLKVKQKLIISTNP
        E NDD KIH  +PSRMKRK S+ INTEGSL VK + II TNP
Subjt:  EVNDDKKIHRIIPSRMKRKFSLVINTEGSLKVKQKLIISTNP
TYK14888.1 gag protease polyprotein [Cucumis melo var. makuwa]1.6e-0569.05Show/hide
Query:  EVNDDKKIHRIIPSRMKRKFSLVINTEGSLKVKQKLIISTNP
        E NDD KIH  +PSRMKRK S+ INTEGSL VK + II TNP
Subjt:  EVNDDKKIHRIIPSRMKRKFSLVINTEGSLKVKQKLIISTNP
TYK19713.1 gag protease polyprotein [Cucumis melo var. makuwa]1.6e-0569.05Show/hide
Query:  EVNDDKKIHRIIPSRMKRKFSLVINTEGSLKVKQKLIISTNP
        E NDD KIH  +PSRMKRK S+ INTEGSL VK + II TNP
Subjt:  EVNDDKKIHRIIPSRMKRKFSLVINTEGSLKVKQKLIISTNP
TrEMBL top hitse value%identityAlignment
A0A5A7UI09 Retrotransposon gag protein1.0e-0569.05Show/hide
Query:  EVNDDKKIHRIIPSRMKRKFSLVINTEGSLKVKQKLIISTNP
        E NDD KIH  +PSRMKRK S+ INTEGSL VK + II TNP
Subjt:  EVNDDKKIHRIIPSRMKRKFSLVINTEGSLKVKQKLIISTNP
A0A5A7V6H5 Ty3-gypsy retrotransposon protein7.7e-0669.05Show/hide
Query:  EVNDDKKIHRIIPSRMKRKFSLVINTEGSLKVKQKLIISTNP
        E NDD KIH  +PSRMKRK S+ INTEGSL VK + II TNP
Subjt:  EVNDDKKIHRIIPSRMKRKFSLVINTEGSLKVKQKLIISTNP
A0A5D3CD55 Ty3-gypsy retrotransposon protein7.7e-0669.05Show/hide
Query:  EVNDDKKIHRIIPSRMKRKFSLVINTEGSLKVKQKLIISTNP
        E NDD KIH  +PSRMKRK S+ INTEGSL VK + II TNP
Subjt:  EVNDDKKIHRIIPSRMKRKFSLVINTEGSLKVKQKLIISTNP
A0A5D3CUI5 Gag protease polyprotein7.7e-0669.05Show/hide
Query:  EVNDDKKIHRIIPSRMKRKFSLVINTEGSLKVKQKLIISTNP
        E NDD KIH  +PSRMKRK S+ INTEGSL VK + II TNP
Subjt:  EVNDDKKIHRIIPSRMKRKFSLVINTEGSLKVKQKLIISTNP
A0A5D3D881 Gag protease polyprotein7.7e-0669.05Show/hide
Query:  EVNDDKKIHRIIPSRMKRKFSLVINTEGSLKVKQKLIISTNP
        E NDD KIH  +PSRMKRK S+ INTEGSL VK + II TNP
Subjt:  EVNDDKKIHRIIPSRMKRKFSLVINTEGSLKVKQKLIISTNP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAGTGAATGATGACAAGAAAATTCACAGAATTATTCCTTCCCGTATGAAGAGAAAATTCTCTCTTGTTATAAATACAGAAGGTTCCTTAAAAGTAAAACAAAAGCTCAT
CATCTCAACCAATCCTAAA
mRNA sequenceShow/hide mRNA sequence
GAAGTGAATGATGACAAGAAAATTCACAGAATTATTCCTTCCCGTATGAAGAGAAAATTCTCTCTTGTTATAAATACAGAAGGTTCCTTAAAAGTAAAACAAAAGCTCAT
CATCTCAACCAATCCTAAA
Protein sequenceShow/hide protein sequence
EVNDDKKIHRIIPSRMKRKFSLVINTEGSLKVKQKLIISTNPK