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MS009905 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009905
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCoiled-coil domain-containing protein 18, putative isoform 2
Genome locationscaffold206:533746..535840
RNA-Seq ExpressionMS009905
SyntenyMS009905
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605318.1 hypothetical protein SDJN03_02635, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2570.65Show/hide
Query:  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLEPVECKAARDRNINGRKKQVYYEEELSDLEPLYRFRDIVSAPF
        M RIDRKSSIENEPRTLKMHQIQFAREAALY++NT++I+EAMRIFTEGLE VECKA  DR  +   +   +EEE+ +L  LYR  DIVSAPF
Subjt:  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLEPVECKAARDRNINGRKKQVYYEEELSDLEPLYRFRDIVSAPF

XP_008460897.1 PREDICTED: uncharacterized protein LOC103499638 [Cucumis melo]1.1e-2770.65Show/hide
Query:  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLEPVECKAARDRNINGRKKQVYYEEELSDLEPLYRFRDIVSAPF
        MG IDRKSSIENEPRTLKM+QIQFAREAALY+LNTTTI+EAM+IFTEGL+PVECKA  D + +   K  Y++EE+ +L+P  + RDIVSAPF
Subjt:  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLEPVECKAARDRNINGRKKQVYYEEELSDLEPLYRFRDIVSAPF

XP_011649401.1 uncharacterized protein LOC105434623 [Cucumis sativus]7.8e-2668.82Show/hide
Query:  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLEPVECKAARDRNINGRKKQVYYEEELSD-LEPLYRFRDIVSAPF
        MG IDRKSSIENEPRTLKMHQIQFAREAALY++NT TI+EAM+IFTEGL+PVECKA  + + +   K  Y++EE+ + L+P Y+ RDIVSAPF
Subjt:  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLEPVECKAARDRNINGRKKQVYYEEELSD-LEPLYRFRDIVSAPF

XP_022150869.1 uncharacterized protein LOC111018915 [Momordica charantia]4.6e-4297.83Show/hide
Query:  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLEPVECKAARDRNINGRKKQVYYEEELSDLEPLYRFRDIVSAPF
        MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLE VECKA RDRNINGRKKQVYYEEELSDLEPLYRFRDIVSAPF
Subjt:  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLEPVECKAARDRNINGRKKQVYYEEELSDLEPLYRFRDIVSAPF

XP_038902606.1 uncharacterized protein LOC120089256 [Benincasa hispida]5.4e-2772.04Show/hide
Query:  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLEPVECKAARDR-NINGRKKQVYYEEELSDLEPLYRFRDIVSAPF
        MG IDRKSSIENEPRTL+MHQIQFAREAALY++NTTTI+EAM+IFTEGL+PVECKA +D+ +I G     Y+EEE  +L+ LY+ RDIVSAPF
Subjt:  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLEPVECKAARDR-NINGRKKQVYYEEELSDLEPLYRFRDIVSAPF

TrEMBL top hitse value%identityAlignment
A0A0A0LQ89 Uncharacterized protein3.8e-2668.82Show/hide
Query:  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLEPVECKAARDRNINGRKKQVYYEEELSD-LEPLYRFRDIVSAPF
        MG IDRKSSIENEPRTLKMHQIQFAREAALY++NT TI+EAM+IFTEGL+PVECKA  + + +   K  Y++EE+ + L+P Y+ RDIVSAPF
Subjt:  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLEPVECKAARDRNINGRKKQVYYEEELSD-LEPLYRFRDIVSAPF

A0A1R3GDT9 Uncharacterized protein1.2e-1656.52Show/hide
Query:  IDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLEPVECKAARDR---NINGRKKQVYYEEELSDLEPLYRFRDIVSAPF
        IDRKSSIE+EPRTL  HQIQ AREAA+Y+++T +I+EAM IFTEGLEPV   A  D    N     K++ +  EL + + L+ FRD+VSAPF
Subjt:  IDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLEPVECKAARDR---NINGRKKQVYYEEELSDLEPLYRFRDIVSAPF

A0A1S3CDH2 uncharacterized protein LOC1034996385.3e-2870.65Show/hide
Query:  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLEPVECKAARDRNINGRKKQVYYEEELSDLEPLYRFRDIVSAPF
        MG IDRKSSIENEPRTLKM+QIQFAREAALY+LNTTTI+EAM+IFTEGL+PVECKA  D + +   K  Y++EE+ +L+P  + RDIVSAPF
Subjt:  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLEPVECKAARDRNINGRKKQVYYEEELSDLEPLYRFRDIVSAPF

A0A6J1DBC1 uncharacterized protein LOC1110189152.2e-4297.83Show/hide
Query:  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLEPVECKAARDRNINGRKKQVYYEEELSDLEPLYRFRDIVSAPF
        MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLE VECKA RDRNINGRKKQVYYEEELSDLEPLYRFRDIVSAPF
Subjt:  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLEPVECKAARDRNINGRKKQVYYEEELSDLEPLYRFRDIVSAPF

A0A6J1G887 uncharacterized protein LOC1114516485.5e-2568.48Show/hide
Query:  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLEPVECKAARDRNINGRKKQVYYEEELSDLEPLYRFRDIVSAPF
        M RIDRKSSIENEPRTLKMHQIQFAREAALY++NT++I+EAMRIFTEGLE VECK   DR  +   +   +EEE+ +L   YR  DIVSAPF
Subjt:  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLEPVECKAARDRNINGRKKQVYYEEELSDLEPLYRFRDIVSAPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G33467.1 unknown protein2.2e-1040.21Show/hide
Query:  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFT-----EGLEPVECKAARDRNINGRKKQVYYEEELSDLEPLYRFRDIVSAPF
        M  ++R+SSIE EP TL + Q++ ARE ALY++ T T++EAM IFT     EGL   E +  R  N+   +    YE+E       + + DI +APF
Subjt:  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFT-----EGLEPVECKAARDRNINGRKKQVYYEEELSDLEPLYRFRDIVSAPF

AT4G33467.2 unknown protein1.7e-1040.62Show/hide
Query:  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFT----EGLEPVECKAARDRNINGRKKQVYYEEELSDLEPLYRFRDIVSAPF
        M  ++R+SSIE EP TL + Q++ ARE ALY++ T T++EAM IFT    EGL   E +  R  N+   +    YE+E       + + DI +APF
Subjt:  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFT----EGLEPVECKAARDRNINGRKKQVYYEEELSDLEPLYRFRDIVSAPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGAATTGATAGAAAATCATCCATAGAAAATGAGCCAAGGACTCTCAAAATGCACCAAATTCAATTTGCAAGGGAAGCAGCACTCTATATCCTAAACACCACCAC
AATAGATGAAGCAATGAGGATTTTCACAGAGGGATTAGAACCAGTAGAATGCAAAGCAGCTCGAGATAGAAATATAAATGGGAGGAAAAAACAAGTCTACTATGAAGAAG
AACTTAGTGATTTAGAACCTCTTTATCGATTCAGAGATATTGTCTCGGCCCCTTTT
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGAATTGATAGAAAATCATCCATAGAAAATGAGCCAAGGACTCTCAAAATGCACCAAATTCAATTTGCAAGGGAAGCAGCACTCTATATCCTAAACACCACCAC
AATAGATGAAGCAATGAGGATTTTCACAGAGGGATTAGAACCAGTAGAATGCAAAGCAGCTCGAGATAGAAATATAAATGGGAGGAAAAAACAAGTCTACTATGAAGAAG
AACTTAGTGATTTAGAACCTCTTTATCGATTCAGAGATATTGTCTCGGCCCCTTTT
Protein sequenceShow/hide protein sequence
MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLEPVECKAARDRNINGRKKQVYYEEELSDLEPLYRFRDIVSAPF