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MS009974 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009974
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold223:1439..1648
RNA-Seq ExpressionMS009974
SyntenyMS009974
Gene Ontology termsGO:0050789 - regulation of biological process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBG98819.1 VIRB2-interacting protein 2 [Prunus dulcis]1.7e-0953.23Show/hide
Query:  GLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVITAIYGEEPFGWMSKPLKNSSISRPWIDV
        GLGVGSL  RS+AL  KWLWRF  E    W KVI +IYG +  GW +KP    S   PW D+
Subjt:  GLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVITAIYGEEPFGWMSKPLKNSSISRPWIDV

BBN67784.1 VIRB2-interacting protein 2 [Prunus dulcis]1.7e-0953.23Show/hide
Query:  GLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVITAIYGEEPFGWMSKPLKNSSISRPWIDV
        GLGVGSL  RS+AL  KWLWRF  E    W KVI +IYG +  GW +KP    S   PW D+
Subjt:  GLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVITAIYGEEPFGWMSKPLKNSSISRPWIDV

BBN69746.1 VIRB2-interacting protein 2 [Prunus dulcis]1.7e-0953.23Show/hide
Query:  GLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVITAIYGEEPFGWMSKPLKNSSISRPWIDV
        GLGVGSL  RS+AL  KWLWRF  E    W KVI +IYG +  GW +KP    S   PW D+
Subjt:  GLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVITAIYGEEPFGWMSKPLKNSSISRPWIDV

VVA25489.1 Hypothetical predicted protein, partial [Prunus dulcis]1.7e-0953.23Show/hide
Query:  GLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVITAIYGEEPFGWMSKPLKNSSISRPWIDV
        GLGVGSL  RS+AL  KWLWRF  E    W KVI +IYG +  GW +KP    S   PW D+
Subjt:  GLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVITAIYGEEPFGWMSKPLKNSSISRPWIDV

XP_022158566.1 uncharacterized protein LOC111025019 [Momordica charantia]3.2e-1144.93Show/hide
Query:  GLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVITAIYGEEPFGWMSKPLKNSSISRPWIDVQETSSDF
        GLG+G+   ++ ALLMKWLW F  E+   WR+VI +IYG + +GW++K  K  +  RPW D+ +  S F
Subjt:  GLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVITAIYGEEPFGWMSKPLKNSSISRPWIDVQETSSDF

TrEMBL top hitse value%identityAlignment
A0A4Y1R3V4 VIRB2-interacting protein 28.4e-1053.23Show/hide
Query:  GLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVITAIYGEEPFGWMSKPLKNSSISRPWIDV
        GLGVGSL  RS+AL  KWLWRF  E    W KVI +IYG +  GW +KP    S   PW D+
Subjt:  GLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVITAIYGEEPFGWMSKPLKNSSISRPWIDV

A0A5E4FED8 Reverse transcriptase domain-containing protein (Fragment)8.4e-1053.23Show/hide
Query:  GLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVITAIYGEEPFGWMSKPLKNSSISRPWIDV
        GLGVGSL  RS+AL  KWLWRF  E    W KVI +IYG +  GW +KP    S   PW D+
Subjt:  GLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVITAIYGEEPFGWMSKPLKNSSISRPWIDV

A0A5H2XKI7 VIRB2-interacting protein 28.4e-1053.23Show/hide
Query:  GLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVITAIYGEEPFGWMSKPLKNSSISRPWIDV
        GLGVGSL  RS+AL  KWLWRF  E    W KVI +IYG +  GW +KP    S   PW D+
Subjt:  GLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVITAIYGEEPFGWMSKPLKNSSISRPWIDV

A0A6J1E196 uncharacterized protein LOC1110250191.5e-1144.93Show/hide
Query:  GLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVITAIYGEEPFGWMSKPLKNSSISRPWIDVQETSSDF
        GLG+G+   ++ ALLMKWLW F  E+   WR+VI +IYG + +GW++K  K  +  RPW D+ +  S F
Subjt:  GLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVITAIYGEEPFGWMSKPLKNSSISRPWIDVQETSSDF

M5WDM3 zf-RVT domain-containing protein (Fragment)6.5e-1053.23Show/hide
Query:  GLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVITAIYGEEPFGWMSKPLKNSSISRPWIDV
        GLGVGSL  RS AL  KWLWRF IE    W KVI +IYG +  GW +KP    +   PW D+
Subjt:  GLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVITAIYGEEPFGWMSKPLKNSSISRPWIDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTCTAGGTGTAGGCTCCCTAGAGAAAAGAAGTATTGCTCTCCTCATGAAATGGTTGTGGCGCTTTGTCATTGAAAAAACACGTTTTTGGAGGAAAGTTATAACA
GCCATCTACGGGGAAGAGCCTTTTGGGTGGATGTCAAAGCCCCTAAAGAATTCTTCCATAAGCAGACCATGGATTGATGTTCAAGAAACTTCATCGGATTTTTGT
mRNA sequenceShow/hide mRNA sequence
GGTCTAGGTGTAGGCTCCCTAGAGAAAAGAAGTATTGCTCTCCTCATGAAATGGTTGTGGCGCTTTGTCATTGAAAAAACACGTTTTTGGAGGAAAGTTATAACA
GCCATCTACGGGGAAGAGCCTTTTGGGTGGATGTCAAAGCCCCTAAAGAATTCTTCCATAAGCAGACCATGGATTGATGTTCAAGAAACTTCATCGGATTTTTGT
Protein sequenceShow/hide protein sequence
GLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVITAIYGEEPFGWMSKPLKNSSISRPWIDVQETSSDFC