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MS009975 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009975
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold223:1754..1924
RNA-Seq ExpressionMS009975
SyntenyMS009975
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]4.6e-0853.57Show/hide
Query:  VGKFEKVDSDEEGKCWGQSLRVRIQIDVTKPLRRGVLIKIGTMADERWIPITYEKL
        +G F  VD +E+G  WG SLR+R+ ID+TKPLRRG+ I I       WIPI YE+L
Subjt:  VGKFEKVDSDEEGKCWGQSLRVRIQIDVTKPLRRGVLIKIGTMADERWIPITYEKL
XP_024924622.1 uncharacterized protein LOC112489822 [Ziziphus jujuba]8.6e-0751.72Show/hide
Query:  VGKFEKVDSDEEGKCWGQSLRVRIQ--IDVTKPLRRGVLIKIGTMADERWIPITYEKL
        +G    VDSDEEG CWG+ +RVR++  ID+ KPLRRG+LI+    AD  W+   YE+L
Subjt:  VGKFEKVDSDEEGKCWGQSLRVRIQ--IDVTKPLRRGVLIKIGTMADERWIPITYEKL
XP_039795238.1 uncharacterized protein LOC120660688 [Panicum virgatum]7.8e-0850Show/hide
Query:  VGKFEKVDSDEEGKCWGQSLRVRIQIDVTKPLRRGVLIKIGTMADERWIPITYEKL
        +GK EKVD+D  G+ WG  LR +++ID+TKPLRRGV I       + W  + YEKL
Subjt:  VGKFEKVDSDEEGKCWGQSLRVRIQIDVTKPLRRGVLIKIGTMADERWIPITYEKL
XP_039815364.1 uncharacterized protein LOC120678302 [Panicum virgatum]8.6e-0748.21Show/hide
Query:  VGKFEKVDSDEEGKCWGQSLRVRIQIDVTKPLRRGVLIKIGTMADERWIPITYEKL
        +G+F +VD + +    G+ LRV+++I++ KPLRRG++I +G  A ERW PITYE L
Subjt:  VGKFEKVDSDEEGKCWGQSLRVRIQIDVTKPLRRGVLIKIGTMADERWIPITYEKL
XP_039827601.1 uncharacterized protein LOC120689378 [Panicum virgatum]1.1e-0648.21Show/hide
Query:  VGKFEKVDSDEEGKCWGQSLRVRIQIDVTKPLRRGVLIKIGTMADERWIPITYEKL
        +G+F +VD + +    G+ LRV+++I++ KPLRRG++I +G  A ERW PITYE L
Subjt:  VGKFEKVDSDEEGKCWGQSLRVRIQIDVTKPLRRGVLIKIGTMADERWIPITYEKL
TrEMBL top hitse value%identityAlignment
A0A6J1DU55 uncharacterized protein LOC1110231352.2e-0853.57Show/hide
Query:  VGKFEKVDSDEEGKCWGQSLRVRIQIDVTKPLRRGVLIKIGTMADERWIPITYEKL
        +G F  VD +E+G  WG SLR+R+ ID+TKPLRRG+ I I       WIPI YE+L
Subjt:  VGKFEKVDSDEEGKCWGQSLRVRIQIDVTKPLRRGVLIKIGTMADERWIPITYEKL
A0A6J1DX30 uncharacterized protein LOC1110248749.3e-0744.64Show/hide
Query:  VGKFEKVDSDEEGKCWGQSLRVRIQIDVTKPLRRGVLIKIGTMADERWIPITYEKL
        +G FE+ D D+    WG +LRVR+ +D++KPLRRG+ + +       WIPI YE+L
Subjt:  VGKFEKVDSDEEGKCWGQSLRVRIQIDVTKPLRRGVLIKIGTMADERWIPITYEKL
A0A6P6FRB5 uncharacterized protein LOC1124898224.2e-0751.72Show/hide
Query:  VGKFEKVDSDEEGKCWGQSLRVRIQ--IDVTKPLRRGVLIKIGTMADERWIPITYEKL
        +G    VDSDEEG CWG+ +RVR++  ID+ KPLRRG+LI+    AD  W+   YE+L
Subjt:  VGKFEKVDSDEEGKCWGQSLRVRIQ--IDVTKPLRRGVLIKIGTMADERWIPITYEKL
A0A803P119 Uncharacterized protein1.4e-0750Show/hide
Query:  VGKFEKVDSDEEGKCWGQSLRVRIQIDVTKPLRRGVLIKIGTMADERWIPITYEKL
        VG+F KVD D   + WG  +R+RI +DVT+PL RG L+KI  + D+ W+ + YEKL
Subjt:  VGKFEKVDSDEEGKCWGQSLRVRIQIDVTKPLRRGVLIKIGTMADERWIPITYEKL
A0A803QQH9 Uncharacterized protein5.4e-0746.43Show/hide
Query:  VGKFEKVDSDEEGKCWGQSLRVRIQIDVTKPLRRGVLIKIGTMADERWIPITYEKL
        +GKFE V  D   + WG  LR+R+ +DVTKPL+RG +I +G + D+ W+   YE+L
Subjt:  VGKFEKVDSDEEGKCWGQSLRVRIQIDVTKPLRRGVLIKIGTMADERWIPITYEKL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTGGGAAGTTTGAAAAGGTGGATTCAGATGAGGAAGGAAAGTGTTGGGGACAATCTTTAAGAGTTAGAATTCAGATTGACGTCACTAAGCCTTTACGAAGAGGA
GTTCTGATTAAGATCGGAACTATGGCTGACGAACGATGGATCCCCATAACCTACGAGAAGCTAACA
mRNA sequenceShow/hide mRNA sequence
GTTGGGAAGTTTGAAAAGGTGGATTCAGATGAGGAAGGAAAGTGTTGGGGACAATCTTTAAGAGTTAGAATTCAGATTGACGTCACTAAGCCTTTACGAAGAGGA
GTTCTGATTAAGATCGGAACTATGGCTGACGAACGATGGATCCCCATAACCTACGAGAAGCTAACA
Protein sequenceShow/hide protein sequence
VGKFEKVDSDEEGKCWGQSLRVRIQIDVTKPLRRGVLIKIGTMADERWIPITYEKLT