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MS009976 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009976
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDBD_Tnp_Mut domain-containing protein
Genome locationscaffold223:33160..33300
RNA-Seq ExpressionMS009976
SyntenyMS009976
Gene Ontology termsNA
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054854.1 uncharacterized protein E6C27_scaffold406G00610 [Cucumis melo var. makuwa]1.6e-0646.81Show/hide
Query:  VALKGSFQFKTVKFNKKQLVLKCLEESCNWYLHSSRYLDGKIWVIRK
        +A+K +F+FKTVK N K +  KC +++C+WY+ +SRY  G++W +RK
Subjt:  VALKGSFQFKTVKFNKKQLVLKCLEESCNWYLHSSRYLDGKIWVIRK
KAA0065296.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]2.7e-0646.81Show/hide
Query:  VALKGSFQFKTVKFNKKQLVLKCLEESCNWYLHSSRYLDGKIWVIRK
        +A+K +F+FKTV+ N K +  KC +++C WY+ +SRY  GK+W +RK
Subjt:  VALKGSFQFKTVKFNKKQLVLKCLEESCNWYLHSSRYLDGKIWVIRK
KAA0067349.1 uncharacterized protein E6C27_scaffold179G00600 [Cucumis melo var. makuwa]3.5e-0646.81Show/hide
Query:  VALKGSFQFKTVKFNKKQLVLKCLEESCNWYLHSSRYLDGKIWVIRK
        +A+K +F+FKTV+ N K +  KC E++C WY+ +SRY  G++W +RK
Subjt:  VALKGSFQFKTVKFNKKQLVLKCLEESCNWYLHSSRYLDGKIWVIRK
TYK22454.1 uncharacterized protein E5676_scaffold3009G00020 [Cucumis melo var. makuwa]1.6e-0646.81Show/hide
Query:  VALKGSFQFKTVKFNKKQLVLKCLEESCNWYLHSSRYLDGKIWVIRK
        +A+K +F+FKTVK N K +  KC +++C+WY+ +SRY  G++W +RK
Subjt:  VALKGSFQFKTVKFNKKQLVLKCLEESCNWYLHSSRYLDGKIWVIRK
TYK28211.1 MuDR family transposase [Cucumis melo var. makuwa]6.0e-0644.68Show/hide
Query:  VALKGSFQFKTVKFNKKQLVLKCLEESCNWYLHSSRYLDGKIWVIRK
        +A+K +F+FKTV+ N K +  KC +++C WY+ +SRY  G++W +RK
Subjt:  VALKGSFQFKTVKFNKKQLVLKCLEESCNWYLHSSRYLDGKIWVIRK
TrEMBL top hitse value%identityAlignment
A0A5A7UI69 SWIM-type domain-containing protein7.7e-0746.81Show/hide
Query:  VALKGSFQFKTVKFNKKQLVLKCLEESCNWYLHSSRYLDGKIWVIRK
        +A+K +F+FKTVK N K +  KC +++C+WY+ +SRY  G++W +RK
Subjt:  VALKGSFQFKTVKFNKKQLVLKCLEESCNWYLHSSRYLDGKIWVIRK
A0A5A7VG38 Protein FAR1-RELATED SEQUENCE 4-like1.3e-0646.81Show/hide
Query:  VALKGSFQFKTVKFNKKQLVLKCLEESCNWYLHSSRYLDGKIWVIRK
        +A+K +F+FKTV+ N K +  KC +++C WY+ +SRY  GK+W +RK
Subjt:  VALKGSFQFKTVKFNKKQLVLKCLEESCNWYLHSSRYLDGKIWVIRK
A0A5A7VQ50 DBD_Tnp_Mut domain-containing protein1.7e-0646.81Show/hide
Query:  VALKGSFQFKTVKFNKKQLVLKCLEESCNWYLHSSRYLDGKIWVIRK
        +A+K +F+FKTV+ N K +  KC E++C WY+ +SRY  G++W +RK
Subjt:  VALKGSFQFKTVKFNKKQLVLKCLEESCNWYLHSSRYLDGKIWVIRK
A0A5D3DFS5 SWIM-type domain-containing protein7.7e-0746.81Show/hide
Query:  VALKGSFQFKTVKFNKKQLVLKCLEESCNWYLHSSRYLDGKIWVIRK
        +A+K +F+FKTVK N K +  KC +++C+WY+ +SRY  G++W +RK
Subjt:  VALKGSFQFKTVKFNKKQLVLKCLEESCNWYLHSSRYLDGKIWVIRK
A0A5D3DX57 MuDR family transposase2.9e-0644.68Show/hide
Query:  VALKGSFQFKTVKFNKKQLVLKCLEESCNWYLHSSRYLDGKIWVIRK
        +A+K +F+FKTV+ N K +  KC +++C WY+ +SRY  G++W +RK
Subjt:  VALKGSFQFKTVKFNKKQLVLKCLEESCNWYLHSSRYLDGKIWVIRK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTAGCCTTAAAGGGTAGTTTTCAGTTCAAAACAGTAAAATTCAACAAAAAACAGTTGGTATTAAAGTGCCTAGAGGAATCATGCAATTGGTACCTTCATTCTTCT
CGTTACTTAGATGGCAAAATATGGGTTATTAGGAAA
mRNA sequenceShow/hide mRNA sequence
GTAGCCTTAAAGGGTAGTTTTCAGTTCAAAACAGTAAAATTCAACAAAAAACAGTTGGTATTAAAGTGCCTAGAGGAATCATGCAATTGGTACCTTCATTCTTCT
CGTTACTTAGATGGCAAAATATGGGTTATTAGGAAA
Protein sequenceShow/hide protein sequence
VALKGSFQFKTVKFNKKQLVLKCLEESCNWYLHSSRYLDGKIWVIRK