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MS009986 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009986
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Genome locationscaffold223:213185..223415
RNA-Seq ExpressionMS009986
SyntenyMS009986
Gene Ontology termsGO:0045039 - protein insertion into mitochondrial inner membrane (biological process)
GO:0071806 - protein transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0042721 - TIM22 mitochondrial import inner membrane insertion complex (cellular component)
GO:0008320 - protein transmembrane transporter activity (molecular function)
GO:0030943 - mitochondrion targeting sequence binding (molecular function)
InterPro domainsIPR039175 - Mitochondrial import inner membrane translocase subunit TIM22


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593015.1 hypothetical protein SDJN03_12491, partial [Cucurbita argyrosperma subsp. sororia]4.4e-9083.5Show/hide
Query:  LLSKTAMDSETPKTLDSETP----SSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRVSRKSEPD
        +LS+ AMDS  PKTLDS+TP    SSSSSSSNYGDWKERI FPT+LAGF+GGGAGLVSK+RKVHGLANISATYA NLSIV ACYCGAREFVRVSR+SEPD
Subjt:  LLSKTAMDSETPKTLDSETP----SSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRVSRKSEPD

Query:  DLMNSAIAGFGTGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTLGQ
        DLMNSAIAGFGTGA+LGRLQGG+LGSVRYS+MFTV GT  DYATLKL+P FRSYKE++ EES +WMKLPEWSPIQVLDEEALAAKQAREQQLYAQR LGQ
Subjt:  DLMNSAIAGFGTGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTLGQ

Query:  LNKKEP
        +N+K+P
Subjt:  LNKKEP

XP_008458054.1 PREDICTED: uncharacterized protein LOC103497594 [Cucumis melo]4.2e-8885.2Show/hide
Query:  MDSETPKTLDSETPSSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRVSRKSEPDDLMNSAIAGF
        MDS  PKT +S+TP SSS+SS+YG WKERIF+PTLLAG VGGGAGL+SKYRK+HGLANISATYA NLSIV ACYCGAREFVRVSR+SEPDDLMNSAIAGF
Subjt:  MDSETPKTLDSETPSSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRVSRKSEPDDLMNSAIAGF

Query:  GTGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTLGQLNKKEP
        GTGA+LGRLQGGQLGSVRYSL+FT+VGTT DYATLKL+PT RSYKES+ E S +WMKLPEWSPIQVLDEEALAAKQAREQQLYAQR LGQLNKK+P
Subjt:  GTGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTLGQLNKKEP

XP_022157212.1 uncharacterized protein LOC111023975 [Momordica charantia]2.1e-10097.49Show/hide
Query:  MDSETPKTLDSETP---SSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRVSRKSEPDDLMNSAI
        MDSETPKTLDSETP   SSSSSSSNYGDWK+RIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRV RKSEPDDLMNSAI
Subjt:  MDSETPKTLDSETP---SSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRVSRKSEPDDLMNSAI

Query:  AGFGTGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTLGQLNKKEP
        AGFGTGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTLGQLNKKEP
Subjt:  AGFGTGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTLGQLNKKEP

XP_022960027.1 uncharacterized protein LOC111460899 [Cucurbita moschata]9.9e-9083.17Show/hide
Query:  LLSKTAMDSETPKTLDSETP------SSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRVSRKSE
        +LS+ AMDS  PKTLDS+TP      SS SSSSNYGDWKERI FPT+LAGFVGGGAGLVSK+RKVHGLANISATYA NLSIV ACYCGAREFVRVSR+SE
Subjt:  LLSKTAMDSETPKTLDSETP------SSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRVSRKSE

Query:  PDDLMNSAIAGFGTGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTL
        PDDLMNSAIAGFGTGA+LGRLQGG+LGSVRYS+MFTV GT  DYATLKL+P FRSYKE++ EES +WMKLPEWSPIQVLDEEALAAKQAREQQLYAQR L
Subjt:  PDDLMNSAIAGFGTGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTL

Query:  GQLNKKEP
        GQ+NKK+P
Subjt:  GQLNKKEP

XP_038896923.1 uncharacterized protein LOC120085132 [Benincasa hispida]2.4e-9188.44Show/hide
Query:  MDSETPKTLDSETPS---SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRVSRKSEPDDLMNSAI
        MDS  PK LDS+TPS   SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYA NLSIV  CYCGAREFVRVSR+SEPDDLMNSAI
Subjt:  MDSETPKTLDSETPS---SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRVSRKSEPDDLMNSAI

Query:  AGFGTGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTLGQLNKKEP
        AGFGTGA+LGRLQGGQLGSVRYSL+FTVVGTT DYATLKL+P  RSYKES+FEES +WMKLPEWSPI+VLDEEALAAKQAREQQLYAQR LGQLNKK+P
Subjt:  AGFGTGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTLGQLNKKEP

TrEMBL top hitse value%identityAlignment
A0A0A0K6T5 Uncharacterized protein2.9e-8785.28Show/hide
Query:  MDSETPKTLDSETPS-SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRVSRKSEPDDLMNSAIAG
        MDS  PKT +S+TP  SSS+SS+YG WKERIF+PTLLAG VGGGAGL+SKYRKVHGLANISATYA NLSIV ACYCGAREFVRVSR+SEPDDLMNSAIAG
Subjt:  MDSETPKTLDSETPS-SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRVSRKSEPDDLMNSAIAG

Query:  FGTGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTLGQLNKKEP
        FGTGA+LGRLQGG+LGSVRYSLMFT+VGTT DYATLKL+PT RSYKES+ E S +WMKLPEWSPIQVLDEEALAAKQAREQQLYAQR LGQLNKK+P
Subjt:  FGTGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTLGQLNKKEP

A0A1S3C726 uncharacterized protein LOC1034975942.0e-8885.2Show/hide
Query:  MDSETPKTLDSETPSSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRVSRKSEPDDLMNSAIAGF
        MDS  PKT +S+TP SSS+SS+YG WKERIF+PTLLAG VGGGAGL+SKYRK+HGLANISATYA NLSIV ACYCGAREFVRVSR+SEPDDLMNSAIAGF
Subjt:  MDSETPKTLDSETPSSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRVSRKSEPDDLMNSAIAGF

Query:  GTGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTLGQLNKKEP
        GTGA+LGRLQGGQLGSVRYSL+FT+VGTT DYATLKL+PT RSYKES+ E S +WMKLPEWSPIQVLDEEALAAKQAREQQLYAQR LGQLNKK+P
Subjt:  GTGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTLGQLNKKEP

A0A5A7SIX7 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein2.0e-8885.2Show/hide
Query:  MDSETPKTLDSETPSSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRVSRKSEPDDLMNSAIAGF
        MDS  PKT +S+TP SSS+SS+YG WKERIF+PTLLAG VGGGAGL+SKYRK+HGLANISATYA NLSIV ACYCGAREFVRVSR+SEPDDLMNSAIAGF
Subjt:  MDSETPKTLDSETPSSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRVSRKSEPDDLMNSAIAGF

Query:  GTGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTLGQLNKKEP
        GTGA+LGRLQGGQLGSVRYSL+FT+VGTT DYATLKL+PT RSYKES+ E S +WMKLPEWSPIQVLDEEALAAKQAREQQLYAQR LGQLNKK+P
Subjt:  GTGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTLGQLNKKEP

A0A6J1DTZ3 uncharacterized protein LOC1110239751.0e-10097.49Show/hide
Query:  MDSETPKTLDSETP---SSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRVSRKSEPDDLMNSAI
        MDSETPKTLDSETP   SSSSSSSNYGDWK+RIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRV RKSEPDDLMNSAI
Subjt:  MDSETPKTLDSETP---SSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRVSRKSEPDDLMNSAI

Query:  AGFGTGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTLGQLNKKEP
        AGFGTGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTLGQLNKKEP
Subjt:  AGFGTGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTLGQLNKKEP

A0A6J1H677 uncharacterized protein LOC1114608994.8e-9083.17Show/hide
Query:  LLSKTAMDSETPKTLDSETP------SSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRVSRKSE
        +LS+ AMDS  PKTLDS+TP      SS SSSSNYGDWKERI FPT+LAGFVGGGAGLVSK+RKVHGLANISATYA NLSIV ACYCGAREFVRVSR+SE
Subjt:  LLSKTAMDSETPKTLDSETP------SSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRVSRKSE

Query:  PDDLMNSAIAGFGTGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTL
        PDDLMNSAIAGFGTGA+LGRLQGG+LGSVRYS+MFTV GT  DYATLKL+P FRSYKE++ EES +WMKLPEWSPIQVLDEEALAAKQAREQQLYAQR L
Subjt:  PDDLMNSAIAGFGTGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTL

Query:  GQLNKKEP
        GQ+NKK+P
Subjt:  GQLNKKEP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G25120.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein3.4e-4852.33Show/hide
Query:  DSETPKTLDSETPSSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRVSRKSEPDDLMNSAIAGFG
        D ++P+  +      +      G   +R+   +LLAG +GGGAGLVSK+R  H   NI   YAAN +IV  CYCGARE VR++R+SE DDLMNSAI G  
Subjt:  DSETPKTLDSETPSSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRVSRKSEPDDLMNSAIAGFG

Query:  TGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTLGQLNKK
        +GA+LGRLQGG  G++RYSL+F  VGT FDYATLK +P   SY+      +    KLPEWSPI+VLDEEALA K+A E++++ +R LG+LNK+
Subjt:  TGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTLGQLNKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGCTCTCTAAAACTGCCATGGATTCAGAGACTCCAAAAACCCTAGATTCAGAGACTCCCTCTTCTTCTTCTTCTTCTTCAAACTATGGCGATTGGAAGGAGCGC
ATCTTTTTTCCCACCCTTCTCGCAGGGTTTGTTGGGGGAGGAGCTGGGCTAGTGTCCAAGTATCGGAAAGTTCATGGCCTGGCGAACATTTCTGCAACATATGCT
GCAAATTTATCCATTGTCACTGCTTGCTACTGTGGAGCACGCGAGTTTGTTAGAGTTTCTCGAAAGTCAGAACCCGATGATCTTATGAACTCTGCAATAGCTGGG
TTTGGTACCGGAGCTATTCTTGGACGCCTTCAAGGTGGGCAGCTCGGCTCTGTTAGATACTCGTTGATGTTCACCGTCGTCGGGACAACATTCGATTATGCCACT
CTCAAACTAAGACCCACTTTCAGAAGCTACAAGGAATCGGTATTCGAGGAAAGTCGTAATTGGATGAAATTACCGGAATGGTCCCCTATCCAAGTTCTTGATGAG
GAAGCTTTGGCTGCTAAACAAGCTCGGGAGCAACAGCTGTATGCACAGAGGACACTTGGACAATTAAACAAAAAGGAACCT
mRNA sequenceShow/hide mRNA sequence
TTGCTCTCTAAAACTGCCATGGATTCAGAGACTCCAAAAACCCTAGATTCAGAGACTCCCTCTTCTTCTTCTTCTTCTTCAAACTATGGCGATTGGAAGGAGCGC
ATCTTTTTTCCCACCCTTCTCGCAGGGTTTGTTGGGGGAGGAGCTGGGCTAGTGTCCAAGTATCGGAAAGTTCATGGCCTGGCGAACATTTCTGCAACATATGCT
GCAAATTTATCCATTGTCACTGCTTGCTACTGTGGAGCACGCGAGTTTGTTAGAGTTTCTCGAAAGTCAGAACCCGATGATCTTATGAACTCTGCAATAGCTGGG
TTTGGTACCGGAGCTATTCTTGGACGCCTTCAAGGTGGGCAGCTCGGCTCTGTTAGATACTCGTTGATGTTCACCGTCGTCGGGACAACATTCGATTATGCCACT
CTCAAACTAAGACCCACTTTCAGAAGCTACAAGGAATCGGTATTCGAGGAAAGTCGTAATTGGATGAAATTACCGGAATGGTCCCCTATCCAAGTTCTTGATGAG
GAAGCTTTGGCTGCTAAACAAGCTCGGGAGCAACAGCTGTATGCACAGAGGACACTTGGACAATTAAACAAAAAGGAACCT
Protein sequenceShow/hide protein sequence
LLSKTAMDSETPKTLDSETPSSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYAANLSIVTACYCGAREFVRVSRKSEPDDLMNSAIAG
FGTGAILGRLQGGQLGSVRYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRTLGQLNKKEP