; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010038 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010038
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationscaffold779:113833..114486
RNA-Seq ExpressionMS010038
SyntenyMS010038
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604761.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]2.5e-10282.41Show/hide
Query:  DIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVE
        DI+SWNIL+E+CAKT NY K L LFKCML+LQIYPDNYTFISLLSVCAKLCNLALGSSVHG++IKT   C DTF+CNLLI MYGKCGSIGCALKIFD V+
Subjt:  DIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVE

Query:  DRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVT
        DRNLITWT+L+S+LGLHG AYEALERFAEMELSG +PDGVALGAVLTA KHGGLVKEGMELFSKMKV+YG+EPEM+HYQCLVDLLS HG+    EK+I +
Subjt:  DRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVT

Query:  MPFPPDAFLWRSFLEG
        MPFPPDA LWRSFLEG
Subjt:  MPFPPDAFLWRSFLEG

XP_022133878.1 pentatricopeptide repeat-containing protein At3g58590-like [Momordica charantia]1.1e-12199.08Show/hide
Query:  EPDIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDK
        EPDIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDK
Subjt:  EPDIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDK

Query:  VEDRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLI
        VEDRNLITWTILISILGLHGDAYEALERFAEMELSGFRPD VALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLS+HGHAAGVEKLI
Subjt:  VEDRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLI

Query:  VTMPFPPDAFLWRSFLEG
        VTMPFPPDAFLWRSFLEG
Subjt:  VTMPFPPDAFLWRSFLEG

XP_022947134.1 pentatricopeptide repeat-containing protein At3g58590 [Cucurbita moschata]1.0e-10383.33Show/hide
Query:  DIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVE
        DI+SWNIL+E+CAKT NY K L LFKCML+LQIYPDNYTFISLLSVCAKLCNLALGSSVHG++IKT   C DTF+CNLLI MYGKCGSIGCALKIFD V+
Subjt:  DIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVE

Query:  DRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVT
        DRNLITWT+LIS+LGLHG AYEALERFAEMELSG +PDGVALGAVLTACKHGGLVKEGMELFSKMKV+YG+EPEM+HYQCLVDLLS HG+    EK+I +
Subjt:  DRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVT

Query:  MPFPPDAFLWRSFLEG
        MPFPPDA LWRSFLEG
Subjt:  MPFPPDAFLWRSFLEG

XP_022971166.1 pentatricopeptide repeat-containing protein At3g58590 [Cucurbita maxima]4.9e-10383.26Show/hide
Query:  IVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVED
        I+SWNIL+E+CAKT NY K L LFKCML+LQIYPDNYTFISLLSVCAKLCNLALGSSVHG++IKT   C DTF+CNLLI MYGKCGSIGCALKIFD V+D
Subjt:  IVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVED

Query:  RNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVTM
        RNLITWT+LIS+LGLHG AYEALERFAEMELSG +PDGVALGAVLTACKHGGLVKEGMELFSKMKV+YG+EPEM+HYQCLVDLLS HG+    EK+I +M
Subjt:  RNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVTM

Query:  PFPPDAFLWRSFLEG
        PFPPDA LWRSFLEG
Subjt:  PFPPDAFLWRSFLEG

XP_023532810.1 pentatricopeptide repeat-containing protein At3g58590 [Cucurbita pepo subsp. pepo]1.1e-10282.41Show/hide
Query:  DIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVE
        DI+SWNIL+E+CAKT NY K L LFKCML+LQIYPDNYTFISLLSVCAKLCNLALGSSVHG++IKT   C DTF+CNLLI MYGKCGSIGCALKIFD V+
Subjt:  DIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVE

Query:  DRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVT
        DRNLITWT+LIS+LGLHG AYEALERFAEMELSG +PDGVALGAVLTACKHGGLVKEGMELF KMKV+YG+EPEM+HYQC+V+LLSTHG     EK+I +
Subjt:  DRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVT

Query:  MPFPPDAFLWRSFLEG
        MPFPPDA LWRSFLEG
Subjt:  MPFPPDAFLWRSFLEG

TrEMBL top hitse value%identityAlignment
A0A1S3C2S6 pentatricopeptide repeat-containing protein At3g585905.7e-9777.88Show/hide
Query:  PDIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKV
        PD++SWNILIEACAK + Y K L LFKCML+ QIYPDNYTF SLLSVCAKLCNLALGSS+HG++IK      DTF+CNLLIDMYGKCGSI CALKIFD+V
Subjt:  PDIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKV

Query:  EDRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIV
        + RNLITWT+LIS+LGLHG AYEA++RFAEMEL G +PD VAL AVLTACKHGGLV+EGMELFSKMKVKYG+EPEMNHYQC+VDLLS+HGH    EK+I 
Subjt:  EDRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIV

Query:  TMPFPPDAFLWRSFLEG
        +MPFPPDA LWR FLEG
Subjt:  TMPFPPDAFLWRSFLEG

A0A5A7UHJ9 Pentatricopeptide repeat-containing protein5.7e-9777.88Show/hide
Query:  PDIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKV
        PD++SWNILIEACAK + Y K L LFKCML+ QIYPDNYTF SLLSVCAKLCNLALGSS+HG++IK      DTF+CNLLIDMYGKCGSI CALKIFD+V
Subjt:  PDIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKV

Query:  EDRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIV
        + RNLITWT+LIS+LGLHG AYEA++RFAEMEL G +PD VAL AVLTACKHGGLV+EGMELFSKMKVKYG+EPEMNHYQC+VDLLS+HGH    EK+I 
Subjt:  EDRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIV

Query:  TMPFPPDAFLWRSFLEG
        +MPFPPDA LWR FLEG
Subjt:  TMPFPPDAFLWRSFLEG

A0A6J1C0G3 pentatricopeptide repeat-containing protein At3g58590-like5.1e-12299.08Show/hide
Query:  EPDIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDK
        EPDIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDK
Subjt:  EPDIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDK

Query:  VEDRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLI
        VEDRNLITWTILISILGLHGDAYEALERFAEMELSGFRPD VALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLS+HGHAAGVEKLI
Subjt:  VEDRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLI

Query:  VTMPFPPDAFLWRSFLEG
        VTMPFPPDAFLWRSFLEG
Subjt:  VTMPFPPDAFLWRSFLEG

A0A6J1G5W7 pentatricopeptide repeat-containing protein At3g585904.8e-10483.33Show/hide
Query:  DIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVE
        DI+SWNIL+E+CAKT NY K L LFKCML+LQIYPDNYTFISLLSVCAKLCNLALGSSVHG++IKT   C DTF+CNLLI MYGKCGSIGCALKIFD V+
Subjt:  DIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVE

Query:  DRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVT
        DRNLITWT+LIS+LGLHG AYEALERFAEMELSG +PDGVALGAVLTACKHGGLVKEGMELFSKMKV+YG+EPEM+HYQCLVDLLS HG+    EK+I +
Subjt:  DRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVT

Query:  MPFPPDAFLWRSFLEG
        MPFPPDA LWRSFLEG
Subjt:  MPFPPDAFLWRSFLEG

A0A6J1I2K3 pentatricopeptide repeat-containing protein At3g585902.4e-10383.26Show/hide
Query:  IVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVED
        I+SWNIL+E+CAKT NY K L LFKCML+LQIYPDNYTFISLLSVCAKLCNLALGSSVHG++IKT   C DTF+CNLLI MYGKCGSIGCALKIFD V+D
Subjt:  IVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVED

Query:  RNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVTM
        RNLITWT+LIS+LGLHG AYEALERFAEMELSG +PDGVALGAVLTACKHGGLVKEGMELFSKMKV+YG+EPEM+HYQCLVDLLS HG+    EK+I +M
Subjt:  RNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVTM

Query:  PFPPDAFLWRSFLEG
        PFPPDA LWRSFLEG
Subjt:  PFPPDAFLWRSFLEG

SwissProt top hitse value%identityAlignment
O04659 Pentatricopeptide repeat-containing protein At5g271106.2e-4038.92Show/hide
Query:  SWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVEDRN
        SWN++I +     N+ KA+ ++  M+ + + PD  TF S+L  C++L  L  G  +H + I  S    D  + + L+DMY KCG+   A +IF+ +  ++
Subjt:  SWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVEDRN

Query:  LITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVTMPF
        +++WT++IS  G HG   EAL +F EM+  G +PDGV L AVL+AC H GL+ EG++ FS+M+ KYGIEP + HY C++D+L   G      ++I   P 
Subjt:  LITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVTMPF

Query:  PPD
          D
Subjt:  PPD

Q0WN01 Pentatricopeptide repeat-containing protein At3g585905.5e-7358.26Show/hide
Query:  EPDIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDK
        +PD VSWNI I AC+++  + + + LFK ML   I PD YTF+S+LS+C+KLC+L LGSS+HG+I KT  SC DTF+CN+LIDMYGKCGSI   +K+F++
Subjt:  EPDIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDK

Query:  VEDRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLI
          ++NLITWT LIS LG+HG   EALE+F E    GF+PD V+  ++LTAC+HGG+VKEGM LF KMK  YG+EPEM+HY+C VDLL+ +G+    E LI
Subjt:  VEDRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLI

Query:  VTMPFPPDAFLWRSFLEG
          MPFP DA +WR+FL+G
Subjt:  VTMPFPPDAFLWRSFLEG

Q9LFI1 Pentatricopeptide repeat-containing protein At3g53360, mitochondrial5.6e-4140.65Show/hide
Query:  DIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVE
        D VSWN ++ AC +    ++ L LFK ML+ +  PD+ T  +LL  C ++ +L LGS VH   +KT     + F+ N LIDMY KCGS+G A +IFD ++
Subjt:  DIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVE

Query:  DRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVT
        +R++++W+ LI      G   EAL  F EM+ +G  P+ V    VLTAC H GLV+EG++L++ M+ ++GI P   H  C+VDLL+  G     E+ I  
Subjt:  DRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVT

Query:  MPFPPDAFLWRSFL
        M   PD  +W++ L
Subjt:  MPFPPDAFLWRSFL

Q9LFL5 Pentatricopeptide repeat-containing protein At5g168606.2e-4039.45Show/hide
Query:  EPDIVSWNILIEACAKTSNYIKALVLFKCMLM--LQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIF
        E D+V+W ++I   ++  +  KAL L   M     Q  P+ +T    L  CA L  L +G  +H   ++   +    F+ N LIDMY KCGSI  A  +F
Subjt:  EPDIVSWNILIEACAKTSNYIKALVLFKCMLM--LQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIF

Query:  DKVEDRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEK
        D +  +N +TWT L++  G+HG   EAL  F EM   GF+ DGV L  VL AC H G++ +GME F++MK  +G+ P   HY CLVDLL   G      +
Subjt:  DKVEDRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEK

Query:  LIVTMPFPPDAFLWRSFL
        LI  MP  P   +W +FL
Subjt:  LIVTMPFPPDAFLWRSFL

Q9SS60 Pentatricopeptide repeat-containing protein At3g035801.2e-4038.32Show/hide
Query:  DIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVE
        D V+WN +I AC +  ++   L +   M   ++ PD  TF+  L +CA L    LG  +H  +++      +  + N LI+MY KCG +  + ++F+++ 
Subjt:  DIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVE

Query:  DRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVT
         R+++TWT +I   G++G+  +ALE FA+ME SG  PD V   A++ AC H GLV EG+  F KMK  Y I+P + HY C+VDLLS     +  E+ I  
Subjt:  DRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVT

Query:  MPFPPDAFLWRSFL
        MP  PDA +W S L
Subjt:  MPFPPDAFLWRSFL

Arabidopsis top hitse value%identityAlignment
AT3G03580.1 Tetratricopeptide repeat (TPR)-like superfamily protein8.8e-4238.32Show/hide
Query:  DIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVE
        D V+WN +I AC +  ++   L +   M   ++ PD  TF+  L +CA L    LG  +H  +++      +  + N LI+MY KCG +  + ++F+++ 
Subjt:  DIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVE

Query:  DRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVT
         R+++TWT +I   G++G+  +ALE FA+ME SG  PD V   A++ AC H GLV EG+  F KMK  Y I+P + HY C+VDLLS     +  E+ I  
Subjt:  DRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVT

Query:  MPFPPDAFLWRSFL
        MP  PDA +W S L
Subjt:  MPFPPDAFLWRSFL

AT3G53360.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.0e-4240.65Show/hide
Query:  DIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVE
        D VSWN ++ AC +    ++ L LFK ML+ +  PD+ T  +LL  C ++ +L LGS VH   +KT     + F+ N LIDMY KCGS+G A +IFD ++
Subjt:  DIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVE

Query:  DRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVT
        +R++++W+ LI      G   EAL  F EM+ +G  P+ V    VLTAC H GLV+EG++L++ M+ ++GI P   H  C+VDLL+  G     E+ I  
Subjt:  DRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVT

Query:  MPFPPDAFLWRSFL
        M   PD  +W++ L
Subjt:  MPFPPDAFLWRSFL

AT3G58590.1 Pentatricopeptide repeat (PPR) superfamily protein3.9e-7458.26Show/hide
Query:  EPDIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDK
        +PD VSWNI I AC+++  + + + LFK ML   I PD YTF+S+LS+C+KLC+L LGSS+HG+I KT  SC DTF+CN+LIDMYGKCGSI   +K+F++
Subjt:  EPDIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDK

Query:  VEDRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLI
          ++NLITWT LIS LG+HG   EALE+F E    GF+PD V+  ++LTAC+HGG+VKEGM LF KMK  YG+EPEM+HY+C VDLL+ +G+    E LI
Subjt:  VEDRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLI

Query:  VTMPFPPDAFLWRSFLEG
          MPFP DA +WR+FL+G
Subjt:  VTMPFPPDAFLWRSFLEG

AT5G16860.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.4e-4139.45Show/hide
Query:  EPDIVSWNILIEACAKTSNYIKALVLFKCMLM--LQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIF
        E D+V+W ++I   ++  +  KAL L   M     Q  P+ +T    L  CA L  L +G  +H   ++   +    F+ N LIDMY KCGSI  A  +F
Subjt:  EPDIVSWNILIEACAKTSNYIKALVLFKCMLM--LQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIF

Query:  DKVEDRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEK
        D +  +N +TWT L++  G+HG   EAL  F EM   GF+ DGV L  VL AC H G++ +GME F++MK  +G+ P   HY CLVDLL   G      +
Subjt:  DKVEDRNLITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEK

Query:  LIVTMPFPPDAFLWRSFL
        LI  MP  P   +W +FL
Subjt:  LIVTMPFPPDAFLWRSFL

AT5G27110.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.4e-4138.92Show/hide
Query:  SWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVEDRN
        SWN++I +     N+ KA+ ++  M+ + + PD  TF S+L  C++L  L  G  +H + I  S    D  + + L+DMY KCG+   A +IF+ +  ++
Subjt:  SWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVEDRN

Query:  LITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVTMPF
        +++WT++IS  G HG   EAL +F EM+  G +PDGV L AVL+AC H GL+ EG++ FS+M+ KYGIEP + HY C++D+L   G      ++I   P 
Subjt:  LITWTILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVTMPF

Query:  PPD
          D
Subjt:  PPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAACCAGACATTGTATCGTGGAATATTTTGATTGAAGCTTGTGCTAAAACAAGCAATTACATCAAAGCTCTGGTTCTTTTCAAATGCATGCTCATGCTCCAAATCTATCC
AGACAATTATACATTCATCTCCCTTTTGAGTGTTTGTGCTAAATTGTGCAACCTTGCTCTTGGCAGTTCGGTTCATGGCATTATCATAAAGACCAGTCCCAGTTGTCGTG
ATACATTTATGTGCAATCTGCTAATTGACATGTATGGAAAATGTGGAAGCATTGGATGTGCTTTGAAAATATTTGACAAAGTGGAAGACAGAAACTTAATCACATGGACA
ATTCTGATCTCCATCCTGGGGTTACATGGCGACGCTTATGAAGCGTTGGAAAGGTTTGCAGAAATGGAGTTATCGGGGTTTAGGCCTGACGGGGTAGCTCTTGGTGCAGT
GCTTACAGCTTGCAAGCACGGTGGGCTTGTTAAAGAAGGAATGGAGTTGTTTAGCAAGATGAAAGTGAAATACGGAATCGAACCAGAAATGAATCATTATCAATGTCTGG
TTGACTTGCTTTCTACACATGGACATGCTGCGGGAGTGGAGAAGTTGATTGTCACCATGCCTTTTCCTCCTGATGCTTTTCTATGGCGTAGCTTCCTAGAAGGC
mRNA sequenceShow/hide mRNA sequence
GAACCAGACATTGTATCGTGGAATATTTTGATTGAAGCTTGTGCTAAAACAAGCAATTACATCAAAGCTCTGGTTCTTTTCAAATGCATGCTCATGCTCCAAATCTATCC
AGACAATTATACATTCATCTCCCTTTTGAGTGTTTGTGCTAAATTGTGCAACCTTGCTCTTGGCAGTTCGGTTCATGGCATTATCATAAAGACCAGTCCCAGTTGTCGTG
ATACATTTATGTGCAATCTGCTAATTGACATGTATGGAAAATGTGGAAGCATTGGATGTGCTTTGAAAATATTTGACAAAGTGGAAGACAGAAACTTAATCACATGGACA
ATTCTGATCTCCATCCTGGGGTTACATGGCGACGCTTATGAAGCGTTGGAAAGGTTTGCAGAAATGGAGTTATCGGGGTTTAGGCCTGACGGGGTAGCTCTTGGTGCAGT
GCTTACAGCTTGCAAGCACGGTGGGCTTGTTAAAGAAGGAATGGAGTTGTTTAGCAAGATGAAAGTGAAATACGGAATCGAACCAGAAATGAATCATTATCAATGTCTGG
TTGACTTGCTTTCTACACATGGACATGCTGCGGGAGTGGAGAAGTTGATTGTCACCATGCCTTTTCCTCCTGATGCTTTTCTATGGCGTAGCTTCCTAGAAGGC
Protein sequenceShow/hide protein sequence
EPDIVSWNILIEACAKTSNYIKALVLFKCMLMLQIYPDNYTFISLLSVCAKLCNLALGSSVHGIIIKTSPSCRDTFMCNLLIDMYGKCGSIGCALKIFDKVEDRNLITWT
ILISILGLHGDAYEALERFAEMELSGFRPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMNHYQCLVDLLSTHGHAAGVEKLIVTMPFPPDAFLWRSFLEG