; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010059 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010059
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationscaffold779:293275..294570
RNA-Seq ExpressionMS010059
SyntenyMS010059
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ96496.1 chlorophyll a-b binding protein 6A [Cucumis melo var. makuwa]4.5e-13798.37Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGV  NASSRFSMS EWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP

XP_004143800.1 chlorophyll a-b binding protein 6A, chloroplastic [Cucumis sativus]5.0e-13697.56Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFA  VPISGV  NASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP

XP_008453995.1 PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic [Cucumis melo]2.0e-13798.37Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGV  NASSRFSMS+EWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP

XP_022133484.1 chlorophyll a-b binding protein 6A, chloroplastic [Momordica charantia]1.3e-139100Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP

XP_038891246.1 chlorophyll a-b binding protein 6A, chloroplastic [Benincasa hispida]2.0e-13797.97Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGV  NASSRFSMSAEWMPGQPRPPYLDGS+PGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR+ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP

TrEMBL top hitse value%identityAlignment
A0A0A0KNM4 Chlorophyll a-b binding protein, chloroplastic2.4e-13697.56Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFA  VPISGV  NASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP

A0A1S3BYE0 Chlorophyll a-b binding protein, chloroplastic9.8e-13898.37Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGV  NASSRFSMS+EWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP

A0A5A7TXV7 Chlorophyll a-b binding protein, chloroplastic9.8e-13898.37Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGV  NASSRFSMS+EWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP

A0A5D3BC57 Chlorophyll a-b binding protein, chloroplastic2.2e-13798.37Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGV  NASSRFSMS EWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP

A0A6J1BW39 Chlorophyll a-b binding protein, chloroplastic6.1e-140100Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP

SwissProt top hitse value%identityAlignment
P12360 Chlorophyll a-b binding protein 6A, chloroplastic8.9e-12085.37Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGI     PS LSS+KSKFAAA+P+     N  SRFSMSA+WMPGQPRP YLDGSAPGDFGFD L LGEVP NLER+KESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGI+VPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTIL IEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLGYSKDP K +E KVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP
        LLA VGFCVQQSAY GTGPLENLATHLADPWHNNIGD+IIP+ I P
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP

Q01667 Chlorophyll a-b binding protein 6, chloroplastic1.1e-11785.25Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA   +PS+LSSSKSKF +A VP+   G     R  M+A WMPG+PRP YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRL
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDP+KL+E KVKEIKNGRL
Subjt:  VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRL

Query:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRN
        ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+IP N
Subjt:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRN

Q07473 Chlorophyll a-b binding protein CP29.1, chloroplastic3.8e-3841.38Show/hide
Query:  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE-------------------------------------------NLERFKESELIHCRWAMLAVPGILVP
        W PG   P +LDGS  GD+GFDP  LG+  E                                            ++RF+E ELIH RWAMLA  G L  
Subjt:  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE-------------------------------------------NLERFKESELIHCRWAMLAVPGILVP

Query:  EALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPEKLKEYKVKEIKNGRLALLAFV
        E L    W  A +   V G  ++YLGQP+P+ ++ T++ IE L I ++E QR+ E D EK+ YPGG  FDPLG + DPEK  + ++ EIK+ RLA++AF+
Subjt:  EALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPEKLKEYKVKEIKNGRLALLAFV

Query:  GFCVQQSAYPGTGPLENLATHLADPWHNNIGD
        GF VQ +A  G GPL N ATHL+DP H  I D
Subjt:  GFCVQQSAYPGTGPLENLATHLADPWHNNIGD

Q9SDM1 Chlorophyll a-b binding protein 1B-21, chloroplastic4.7e-10575.31Show/hide
Query:  ASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVP
        +S+ L SC  +    PS+L+ S     + +P     A  S R +MSAEW PGQPRP +LDGS+PGDFGFDPL L  VPEN ERFKESE+ HCRWAML VP
Subjt:  ASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVP

Query:  GILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLAL
        G+LVPEALGLGNWVKAQEWAA+P GQATYLG PVPWG LPTIL IEFLAIAF E QR+MEKDPEKKKYPGGAFDPLG+SKDP K +E K+KEIKNGRLA+
Subjt:  GILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLAL

Query:  LAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNI
        LAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+IPRNI
Subjt:  LAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNI

Q9XF88 Chlorophyll a-b binding protein CP29.2, chloroplastic1.5e-3737.94Show/hide
Query:  SNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGAN---ASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE-------------------
        S    +  I  T   S +SS+ S+F A        A+   A +  S    W PG   P YLDGS  GD+GFDP  LG+  E                   
Subjt:  SNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGAN---ASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE-------------------

Query:  ------------------------NLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEH
                                 L+RF+E ELIH RWAMLA  G +  E L    W  A +   V G  ++YLGQP+P+ ++ T++ IE L I ++E 
Subjt:  ------------------------NLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEH

Query:  QRSMEKDPEKKKYPGGA-FDPLGYSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD
        QR+ E D EK+ YPGG  FDPLG + DP K  + ++ EIK+ RLA++ F+GF VQ +A  G GPL N ATHL+DP H  I D
Subjt:  QRSMEKDPEKKKYPGGA-FDPLGYSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD

Arabidopsis top hitse value%identityAlignment
AT3G54890.1 photosystem I light harvesting complex gene 17.7e-11985.25Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA   +PS+LSSSKSKF +A VP+   G     R  M+A WMPG+PRP YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRL
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDP+KL+E KVKEIKNGRL
Subjt:  VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRL

Query:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRN
        ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+IP N
Subjt:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRN

AT3G54890.2 photosystem I light harvesting complex gene 13.3e-9372.13Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA   +PS+LSSSKSKF +A VP+   G     R  M+A WMPG+PRP YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRL
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAF                                  E KVKEIKNGRL
Subjt:  VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRL

Query:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRN
        ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+IP N
Subjt:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRN

AT3G54890.3 photosystem I light harvesting complex gene 17.8e-6379.47Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA   +PS+LSSSKSKF +A VP+   G     R  M+A WMPG+PRP YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLA
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLA
Subjt:  VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLA

AT3G54890.4 photosystem I light harvesting complex gene 12.6e-9082.41Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA   +PS+LSSSKSKF +A VP+   G     R  M+A WMPG+PRP YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGR
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDP+KL+E KVKEIKNG+
Subjt:  VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGR

AT5G01530.1 light harvesting complex photosystem II2.7e-3941.38Show/hide
Query:  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE-------------------------------------------NLERFKESELIHCRWAMLAVPGILVP
        W PG   P +LDGS  GD+GFDP  LG+  E                                            ++RF+E ELIH RWAMLA  G L  
Subjt:  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE-------------------------------------------NLERFKESELIHCRWAMLAVPGILVP

Query:  EALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPEKLKEYKVKEIKNGRLALLAFV
        E L    W  A +   V G  ++YLGQP+P+ ++ T++ IE L I ++E QR+ E D EK+ YPGG  FDPLG + DPEK  + ++ EIK+ RLA++AF+
Subjt:  EALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPEKLKEYKVKEIKNGRLALLAFV

Query:  GFCVQQSAYPGTGPLENLATHLADPWHNNIGD
        GF VQ +A  G GPL N ATHL+DP H  I D
Subjt:  GFCVQQSAYPGTGPLENLATHLADPWHNNIGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAACACCTTGATGAGCTGCGGCATTGCCACCACCGCCTTCCCCTCCGTCCTCTCCTCCTCCAAGTCTAAGTTCGCCGCCGCAGTCCCAATTTCCGGCGTTGG
CGCCAATGCCTCCTCGCGCTTCTCCATGTCCGCCGAATGGATGCCCGGCCAGCCCCGCCCGCCGTACCTCGACGGCTCAGCCCCCGGTGATTTTGGCTTTGACCCTCTTC
GGTTGGGAGAAGTGCCAGAGAATCTCGAGAGGTTCAAGGAGTCTGAGCTGATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCAGAGGCGTTGGGT
TTGGGCAACTGGGTGAAAGCTCAGGAATGGGCAGCAGTTCCAGGAGGCCAAGCTACCTACTTGGGGCAGCCAGTTCCATGGGGAACTTTGCCCACCATTCTGGTCATTGA
GTTCCTTGCCATTGCCTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACCCTGAGAAGAAGAAGTACCCTGGTGGTGCTTTCGACCCATTGGGCTACTCAAAGGACCCTG
AAAAGTTGAAGGAATACAAAGTCAAAGAGATAAAAAATGGACGGCTAGCGCTGTTGGCTTTTGTTGGGTTCTGTGTGCAACAATCGGCATACCCAGGAACAGGGCCATTG
GAGAACTTGGCAACTCACTTGGCTGACCCATGGCACAACAACATTGGCGACATTATCATCCCCAGAAATATTTCGCCT
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCAACACCTTGATGAGCTGCGGCATTGCCACCACCGCCTTCCCCTCCGTCCTCTCCTCCTCCAAGTCTAAGTTCGCCGCCGCAGTCCCAATTTCCGGCGTTGG
CGCCAATGCCTCCTCGCGCTTCTCCATGTCCGCCGAATGGATGCCCGGCCAGCCCCGCCCGCCGTACCTCGACGGCTCAGCCCCCGGTGATTTTGGCTTTGACCCTCTTC
GGTTGGGAGAAGTGCCAGAGAATCTCGAGAGGTTCAAGGAGTCTGAGCTGATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCAGAGGCGTTGGGT
TTGGGCAACTGGGTGAAAGCTCAGGAATGGGCAGCAGTTCCAGGAGGCCAAGCTACCTACTTGGGGCAGCCAGTTCCATGGGGAACTTTGCCCACCATTCTGGTCATTGA
GTTCCTTGCCATTGCCTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACCCTGAGAAGAAGAAGTACCCTGGTGGTGCTTTCGACCCATTGGGCTACTCAAAGGACCCTG
AAAAGTTGAAGGAATACAAAGTCAAAGAGATAAAAAATGGACGGCTAGCGCTGTTGGCTTTTGTTGGGTTCTGTGTGCAACAATCGGCATACCCAGGAACAGGGCCATTG
GAGAACTTGGCAACTCACTTGGCTGACCCATGGCACAACAACATTGGCGACATTATCATCCCCAGAAATATTTCGCCT
Protein sequenceShow/hide protein sequence
MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALG
LGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPL
ENLATHLADPWHNNIGDIIIPRNISP