CuGenDBv2

Gene ID	MS010070
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Ubiquitin family protein
Genome location	scaffold779:357494..357712
RNA-Seq Expression	MS010070
Synteny	MS010070
Gene Ontology terms	GO:0000398 - mRNA splicing, via spliceosome (biological process) GO:0006464 - cellular protein modification process (biological process) GO:0005634 - nucleus (cellular component) GO:0005829 - cytosol (cellular component) GO:0005515 - protein binding (molecular function) GO:0031386 - protein tag (molecular function)
InterPro domains	IPR000626 - Ubiquitin-like domain IPR029071 - Ubiquitin-like domain superfamily IPR039732 - Ubiquitin-like modifier Hub1/Ubl5

Homology

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GenBank top hits

e value

%identity

Alignment

CAA7058928.1 unnamed protein product [Microthlaspi erraticum]

1.4e-33

100

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

KAG5239708.1 ubiquitin protein [Salix suchowensis]

2.4e-33

98.63

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        M+EVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

KAG6520004.1 hypothetical protein ZIOFF_017033 [Zingiber officinale]

3.1e-33

98.63

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRA+KIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

KCW51380.1 hypothetical protein EUGRSUZ_J00924, partial [Eucalyptus grandis]

3.1e-33

98.63

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRA+KIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

XP_002863802.1 ubiquitin-like protein 5 [Arabidopsis lyrata subsp. lyrata]

1.4e-33

100

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

TrEMBL top hits

e value

%identity

Alignment

A0A1J3HSG3 Ubiquitin-like protein 5

6.7e-34

100

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

A0A1S3C3F9 ubiquitin-like protein 5

6.7e-34

100

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

A0A398AR32 Ubiquitin-like domain-containing protein

6.7e-34

100

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

A0A6J1BXR9 ubiquitin-like protein 5

6.7e-34

100

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

A0A6J1I1R2 ubiquitin-like protein 5

6.7e-34

100

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

SwissProt top hits

e value

%identity

Alignment

Q3T0Z3 Ubiquitin-like protein 5

4.0e-28

80.56

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYEIHDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY

Q6EGX7 Ubiquitin-like protein 5

4.0e-28

80.56

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYEIHDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY

Q9BZL1 Ubiquitin-like protein 5

4.0e-28

80.56

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYEIHDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY

Q9EPV8 Ubiquitin-like protein 5

4.0e-28

80.56

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYEIHDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY

Q9FGZ9 Ubiquitin-like protein 5

4.0e-36

98.63

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

Arabidopsis top hits

e value

%identity

Alignment

AT3G45180.1 Ubiquitin-like superfamily protein

7.1e-36

95.89

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNE+DTIGDLKKLVAAQTGTR EKIRIQKWYNIYKDHI LKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

AT5G42300.1 ubiquitin-like protein 5

2.9e-37

98.63

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

Sequences

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CDS sequence

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ATGATCGAGGTGGTGCTGAACGATCGGCTGGGGAAGAAGGTGAGAGTGAAGTGCAACGAAGACGACACCATCGGCGACTTGAAGAAGCTCGTGGCTGCCCAGACTGGGAC
TAGAGCCGAGAAGATTCGGATTCAGAAGTGGTACAATATCTACAAGGATCATATTACTCTCAAGGACTACGAAATCCACGACGGCATGGGCCTCGAACTCTACTACAAT

mRNA sequence

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Protein sequence

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MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

MS010070 (gene) of Bitter gourd (TR) v1 genome