; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010078 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010078
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationscaffold779:433370..433738
RNA-Seq ExpressionMS010078
SyntenyMS010078
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036482.1 auxin-induced protein X15-like [Cucumis melo var. makuwa]4.0e-2560.38Show/hide
Query:  IKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANG-PKLYLPCKEYAFVRI
        +KK +N   Q ++Y   W   C W ++     AKA P+DVPKGHFVVYVGE+ +RYVIEI VL++P+FK LLDSAEEMFGF NG  KLYLPCKE  FV I
Subjt:  IKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANG-PKLYLPCKEYAFVRI

Query:  LQCIGS
        LQC+ S
Subjt:  LQCIGS

KGN48091.2 hypothetical protein Csa_004000 [Cucumis sativus]3.6e-2657.63Show/hide
Query:  IKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANG-PKLYLPCKEYAFVRI
        +KK +N   Q ++Y   W   C W ++     AKAIP+DVPKGHFVVYVGE+ +RYVIEI VL++P+FK LLDSAEE FGF NG  KLYLPCKE  FV I
Subjt:  IKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANG-PKLYLPCKEYAFVRI

Query:  LQCIGSYTKPGHFSPSME
        LQC+ S T      PS+E
Subjt:  LQCIGSYTKPGHFSPSME

XP_004149915.1 auxin-induced protein 15A [Cucumis sativus]3.6e-2657.63Show/hide
Query:  IKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANG-PKLYLPCKEYAFVRI
        +KK +N   Q ++Y   W   C W ++     AKAIP+DVPKGHFVVYVGE+ +RYVIEI VL++P+FK LLDSAEE FGF NG  KLYLPCKE  FV I
Subjt:  IKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANG-PKLYLPCKEYAFVRI

Query:  LQCIGSYTKPGHFSPSME
        LQC+ S T      PS+E
Subjt:  LQCIGSYTKPGHFSPSME

XP_022134179.1 indole-3-acetic acid-induced protein ARG7-like [Momordica charantia]7.2e-67100Show/hide
Query:  SVKRYIKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYA
        SVKRYIKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYA
Subjt:  SVKRYIKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYA

Query:  FVRILQCIGSYTKPGHFSPSMEF
        FVRILQCIGSYTKPGHFSPSMEF
Subjt:  FVRILQCIGSYTKPGHFSPSMEF

XP_022959679.1 auxin-induced protein 15A-like [Cucurbita moschata]1.8e-3870Show/hide
Query:  SVKRYIKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYA
        + K+  +KC+ AA Q  QYA +WCS C W++MSS  E+ AIPEDVPKGHFVVYVGEECRRYV+EIA+LK+P+FK LLDSAEE+FGF N  KLYLPCKE  
Subjt:  SVKRYIKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYA

Query:  FVRILQCIGS
        FV ILQCIGS
Subjt:  FVRILQCIGS

TrEMBL top hitse value%identityAlignment
A0A0A0KJ86 Uncharacterized protein1.7e-2657.63Show/hide
Query:  IKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANG-PKLYLPCKEYAFVRI
        +KK +N   Q ++Y   W   C W ++     AKAIP+DVPKGHFVVYVGE+ +RYVIEI VL++P+FK LLDSAEE FGF NG  KLYLPCKE  FV I
Subjt:  IKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANG-PKLYLPCKEYAFVRI

Query:  LQCIGSYTKPGHFSPSME
        LQC+ S T      PS+E
Subjt:  LQCIGSYTKPGHFSPSME

A0A5D3BLH1 Auxin-induced protein X15-like1.9e-2560.38Show/hide
Query:  IKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANG-PKLYLPCKEYAFVRI
        +KK +N   Q ++Y   W   C W ++     AKA P+DVPKGHFVVYVGE+ +RYVIEI VL++P+FK LLDSAEEMFGF NG  KLYLPCKE  FV I
Subjt:  IKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANG-PKLYLPCKEYAFVRI

Query:  LQCIGS
        LQC+ S
Subjt:  LQCIGS

A0A6J1BY27 indole-3-acetic acid-induced protein ARG7-like3.5e-67100Show/hide
Query:  SVKRYIKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYA
        SVKRYIKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYA
Subjt:  SVKRYIKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYA

Query:  FVRILQCIGSYTKPGHFSPSMEF
        FVRILQCIGSYTKPGHFSPSMEF
Subjt:  FVRILQCIGSYTKPGHFSPSMEF

A0A6J1H8T2 auxin-induced protein 15A-like8.9e-3970Show/hide
Query:  SVKRYIKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYA
        + K+  +KC+ AA Q  QYA +WCS C W++MSS  E+ AIPEDVPKGHFVVYVGEECRRYV+EIA+LK+P+FK LLDSAEE+FGF N  KLYLPCKE  
Subjt:  SVKRYIKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYA

Query:  FVRILQCIGS
        FV ILQCIGS
Subjt:  FVRILQCIGS

A0A7N2MDH5 Uncharacterized protein2.0e-2249.06Show/hide
Query:  RYIKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYAFVR
        R++K C      +     IW +  SWD+ S   +  +IP DVPKGH V+YVGE+C+R+VI+I +LK+P+F ALLD AEE+F FA G KL +PC E  F+ 
Subjt:  RYIKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYAFVR

Query:  ILQCIG
        IL C G
Subjt:  ILQCIG

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR505.2e-1248.53Show/hide
Query:  IPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYAFVRILQCI
        +P DVPKGHF VYVGE   RY++ I+ L +P F++LL  AEE FGF +   L +PC E  F  +   I
Subjt:  IPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYAFVRILQCI

P0DKL1 Auxin-responsive protein SAUR501.1e-1247.06Show/hide
Query:  IPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYAFVRILQCI
        +P DVPKGHFVVYVGE   RY++ I+ L +P F+ LL  +EE FGF +   + +PC+E  F+     I
Subjt:  IPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYAFVRILQCI

P32295 Indole-3-acetic acid-induced protein ARG71.1e-0940Show/hide
Query:  MSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANG-PKLYLPCKEYAFVRILQCIGS
        +S+  EA +   D PKG+  VYVGE  +R+VI ++ L  P+F+ LL  AEE FG+ +    L +PC E  F  I  C+ +
Subjt:  MSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANG-PKLYLPCKEYAFVRILQCIGS

P33082 Auxin-induced protein X154.2e-0943.94Show/hide
Query:  DVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANG-PKLYLPCKEYAFVRILQCI
        D PKG+  VYVGE+ +R+VI ++ +  P F+ LL  AEE FG+ +    L +PC E  F RI  C+
Subjt:  DVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANG-PKLYLPCKEYAFVRILQCI

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 101.1e-0949.18Show/hide
Query:  IPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYAF
        +P+DVPKGHF VYVG    RY++ I+ L +  F+ LL  AEE FGF +   L +PC E  F
Subjt:  IPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYAF

Arabidopsis top hitse value%identityAlignment
AT1G75590.1 SAUR-like auxin-responsive protein family9.8e-1443.66Show/hide
Query:  AKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYAFVRILQCI
        ++ +P DVP GH  VYVG  CRR+V+    L +P+ + LL  AEE FGF N   L +PC+E  F   ++ I
Subjt:  AKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYAFVRILQCI

AT2G21220.1 SAUR-like auxin-responsive protein family2.1e-1639.45Show/hide
Query:  SVKRYIKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYA
        +VKR  K  + A ++ +         CS    + C +   +P DVPKGHF VYVGE+  RY++ I+ L +P FK+LL  AEE FGF +   L +PC+E  
Subjt:  SVKRYIKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYA

Query:  FVRILQCIG
        F  +   IG
Subjt:  FVRILQCIG

AT2G37030.1 SAUR-like auxin-responsive protein family2.8e-2141.44Show/hide
Query:  RYIKKCRNAAIQALQYAAIWCSYCSWDLMSSC----VEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEY
        ++IK C     +      I C+ C       C     EA+ IP DVPKGH VVYVGEE +R+VI I +LK+P+F+ALLD A++ +GF+   +L++PC E 
Subjt:  RYIKKCRNAAIQALQYAAIWCSYCSWDLMSSC----VEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEY

Query:  AFVRILQCIGS
         F+ +++C G+
Subjt:  AFVRILQCIGS

AT3G43120.1 SAUR-like auxin-responsive protein family5.7e-1440.23Show/hide
Query:  CSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYAFVRILQCIGSYTK
        C  D  ++C ++   P DVPKG+  VYVG E RR++I    L + +FK LL+ AEE +GF +   L +PC+   F  +L+CI ++ K
Subjt:  CSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYAFVRILQCIGSYTK

AT3G53250.1 SAUR-like auxin-responsive protein family4.3e-1742.53Show/hide
Query:  CSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYAFVRILQCIGS
        C   SW       E +AIP+DVP+GH VVYVG++ +R+VI++++L +P+FKALLD A++ +   N  +L++PC E  F+ +++C G+
Subjt:  CSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYAFVRILQCIGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTGTAAAACGATACATCAAGAAGTGCAGAAATGCAGCAATTCAGGCTCTACAATATGCAGCAATTTGGTGCAGTTATTGCAGTTGGGATTTGATGTCAAGTTGTGTTGA
GGCAAAAGCAATTCCTGAGGATGTTCCAAAGGGGCATTTTGTGGTGTACGTGGGTGAAGAGTGCAGGAGATATGTTATTGAGATTGCAGTGCTGAAGAATCCTATGTTTA
AGGCACTGCTGGATTCTGCTGAGGAAATGTTTGGATTTGCCAATGGTCCAAAACTCTACTTGCCTTGTAAGGAGTATGCTTTTGTTAGAATTCTTCAGTGTATAGGTTCT
TATACTAAACCAGGCCACTTCTCACCATCTATGGAATTT
mRNA sequenceShow/hide mRNA sequence
TCTGTAAAACGATACATCAAGAAGTGCAGAAATGCAGCAATTCAGGCTCTACAATATGCAGCAATTTGGTGCAGTTATTGCAGTTGGGATTTGATGTCAAGTTGTGTTGA
GGCAAAAGCAATTCCTGAGGATGTTCCAAAGGGGCATTTTGTGGTGTACGTGGGTGAAGAGTGCAGGAGATATGTTATTGAGATTGCAGTGCTGAAGAATCCTATGTTTA
AGGCACTGCTGGATTCTGCTGAGGAAATGTTTGGATTTGCCAATGGTCCAAAACTCTACTTGCCTTGTAAGGAGTATGCTTTTGTTAGAATTCTTCAGTGTATAGGTTCT
TATACTAAACCAGGCCACTTCTCACCATCTATGGAATTT
Protein sequenceShow/hide protein sequence
SVKRYIKKCRNAAIQALQYAAIWCSYCSWDLMSSCVEAKAIPEDVPKGHFVVYVGEECRRYVIEIAVLKNPMFKALLDSAEEMFGFANGPKLYLPCKEYAFVRILQCIGS
YTKPGHFSPSMEF