; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010104 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010104
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationscaffold779:680897..681484
RNA-Seq ExpressionMS010104
SyntenyMS010104
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578789.1 hypothetical protein SDJN03_23237, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2981.41Show/hide
Query:  MACSRAIGATLLALFLVDLAFAARSPREAFGRGGGGGGGGGSGGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAYGRGGGGGGGGGSGGGGGGGIGS
        MACSRA+G  LLALFLVD AFAARSPR AFG GGGGG     GGGGGGGGLFPGSGY SGFGSGGGEGYGEG+GDG +GRGGGGGG    GGGGGGG GS
Subjt:  MACSRAIGATLLALFLVDLAFAARSPREAFGRGGGGGGGGGSGGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAYGRGGGGGGGGGSGGGGGGGIGS

Query:  GSGFGSGSGSGFGSGGGRGGGGGGGGGRGGGGGGGSGNGSGYGSGYGSGGGYGSGSGRGGGGGGGGGGGGGGG---SSGSGSGSGYGSGYGSGSGGWNE
        GSGFGSGSGSGFG G G GGGGG GGG GGGGG G GNGSGYGSGYGSG G+GSG+GRGGGGGGGGGGGGGGG    SGSG GSGYGSGYGSG GGW E
Subjt:  GSGFGSGSGSGFGSGGGRGGGGGGGGGRGGGGGGGSGNGSGYGSGYGSGGGYGSGSGRGGGGGGGGGGGGGGG---SSGSGSGSGYGSGYGSGSGGWNE

XP_008456803.1 PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo]1.4e-2783.84Show/hide
Query:  MACSRAIGATLLALFLVDLAFAARSPREAFGRGGGGGGGGGSGGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAYGRGGGGGGGGGSGGGGGGGIGS
        MA +RAIG TLLALFLVDLAFAAR+PR+ FG GGG GGGGGS GGGGGGGLFPGSGY  GFGSGGGEGYGEGEGDGA+GRGGGGGGG G GGGGG G G 
Subjt:  MACSRAIGATLLALFLVDLAFAARSPREAFGRGGGGGGGGGSGGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAYGRGGGGGGGGGSGGGGGGGIGS

Query:  GSGFGSGSGSGFGSGGGRGGGGGGGGGRGGGGGGGSGNGSGYGSGYGSGGGYGSGSGRGGGGGGGGGGGGGGGSSGSGS--GSGYGSGYGSGSGGWNE
        GSGFG+GSGSGFG GG  GGGGGGG G GGGGG G GNGSGYGSGYGSGGGYGSG GRGGGGGGGGGGGGGGGS+G+GS  GSGYGSGYGSG GGW E
Subjt:  GSGFGSGSGSGFGSGGGRGGGGGGGGGRGGGGGGGSGNGSGYGSGYGSGGGYGSGSGRGGGGGGGGGGGGGGGSSGSGS--GSGYGSGYGSGSGGWNE

XP_011650203.1 glycine-rich cell wall structural protein 2 [Cucumis sativus]9.8e-2682.83Show/hide
Query:  MACSRAIGATLLALFLVDLAFAARSPREAFGRGGGGGGGGGSGGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAYGRGGGGGGGGGSGGGGGGGIGS
        MA +RAIGATLLALFLVDLAFAARSPR+ FG GGG GGGGGS GGGGGGGLFPGSGY  G+GSGGGEGYGEGEGDGA+GRGGGGGGG G GGGGG G G 
Subjt:  MACSRAIGATLLALFLVDLAFAARSPREAFGRGGGGGGGGGSGGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAYGRGGGGGGGGGSGGGGGGGIGS

Query:  GSGFGSGSGSGFGSGGGRGGGGGGGGGRGGGGGGGSGNGSGYGSGYGSGGGYGSGSGRGGGGGGGGGGGGGGGSSGSGS--GSGYGSGYGSGSGGWNE
        GSGFGSGSGSGF    G+ GGGGGG G GGGGG G GNGSGYGSGYGSGGGYGSG   GGGGGGGGGGGGGGGSSG+GS  GSGYGSGYGSG GGW E
Subjt:  GSGFGSGSGSGFGSGGGRGGGGGGGGGRGGGGGGGSGNGSGYGSGYGSGGGYGSGSGRGGGGGGGGGGGGGGGSSGSGS--GSGYGSGYGSGSGGWNE

XP_022939145.1 glycine-rich cell wall structural protein 2-like [Cucurbita moschata]1.1e-2477.94Show/hide
Query:  MACSRAIGATLLALFLVDLAFAARSPREAFGRGGGGGGGGGSGGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAYGRGGGGGGGGGSGGGGGGGIGS
        MACSRA+G  LLALFLVD AFAARSPR AFG GGGG      GGGGGGGGLF GSGYGSGFGSGGGEGYGEG+GDG +GRGGGGG GG  GGGGGGG GS
Subjt:  MACSRAIGATLLALFLVDLAFAARSPREAFGRGGGGGGGGGSGGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAYGRGGGGGGGGGSGGGGGGGIGS

Query:  GSGFGSGSGSGFGSGGGRGGGGGGGGGRGGGGGGGSGNGSGYGSGYGSGGGYGSGSGRGGGGGGGGGGGGGGG--------SSGSGSGSGYGSGYGSGSG
         SGFGSGSGSGFG G G GGGGG GGG GGGGG G GNGSGYGSGYGSG G+GSGSGRGGGGGGG GGGGGGG         SGSG GS YGSGYGSG  
Subjt:  GSGFGSGSGSGFGSGGGRGGGGGGGGGRGGGGGGGSGNGSGYGSGYGSGGGYGSGSGRGGGGGGGGGGGGGGG--------SSGSGSGSGYGSGYGSGSG

Query:  GWNE
        GW E
Subjt:  GWNE

XP_023551514.1 glycine-rich cell wall structural protein 2-like [Cucurbita pepo subsp. pepo]1.2e-2679.9Show/hide
Query:  MACSRAIGATLLALFLVDLAFAARSPREAFGRGGGGGGGGGSGGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAYGRGGGGGGGGGSGGGGGGGIGS
        MACSRA+G  LLALFLVD AFAARS R AFG GGGGGGGGGS  GGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDG +GR    GG G SGGGGG G G 
Subjt:  MACSRAIGATLLALFLVDLAFAARSPREAFGRGGGGGGGGGSGGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAYGRGGGGGGGGGSGGGGGGGIGS

Query:  GSGFGSGSGSGFGSGGGRGGGGGGGGGRGGGGGGGS--GNGSGYGSGYGSGGGYGSGSGRGGGGGGGGGGGGGGG------SSGSGSGSGYGSGYGSGSG
        GSGFGSGSGSGF    GRG GGGGGGGRGGGGGGGS  GNGSGYGSGYGSG  +GSGSG+GGGGGGGGGGGGGGG       SGSG GSGYGSGYGSG G
Subjt:  GSGFGSGSGSGFGSGGGRGGGGGGGGGRGGGGGGGS--GNGSGYGSGYGSGGGYGSGSGRGGGGGGGGGGGGGGG------SSGSGSGSGYGSGYGSGSG

Query:  GWNE
        GW E
Subjt:  GWNE

TrEMBL top hitse value%identityAlignment
A0A067L9H4 Uncharacterized protein7.6e-1673.56Show/hide
Query:  MACSRAIGATLLALFLVDLAFAARSPREAFGRGGGGGGGGGSGGGGGGGGLFP-GSGYGSGFGSGGGEGYGEGEGDG-----AYGRGGGGGGGGGSGGGG
        MA SR +GATLL L LVD+ FAARS +   GRGGGGGGGGG GGGGGGGG    GSGYG G+GSGGGEGYG G G+G      YG GGGGGGGGG G GG
Subjt:  MACSRAIGATLLALFLVDLAFAARSPREAFGRGGGGGGGGGSGGGGGGGGLFP-GSGYGSGFGSGGGEGYGEGEGDG-----AYGRGGGGGGGGGSGGGG

Query:  --GGGIGSGSGFGSGSGSGFGSGGGRGGGGGGGGGRGGGGGGGS----GNGSGYGSGYGSGGGYGSGSGRGGGGGGG--GGGGGGGGSSGSGSGSGY--G
          G G G GSGFGSGSGSG+GSG G+GGGGGGGGGRGGGGGGG     G+GSGYGSGYGSG GYGSG GRGGGGGGG  GGGGGGGG  G G+GSGY  G
Subjt:  --GGGIGSGSGFGSGSGSGFGSGGGRGGGGGGGGGRGGGGGGGS----GNGSGYGSGYGSGGGYGSGSGRGGGGGGG--GGGGGGGGSSGSGSGSGY--G

Query:  SGYGSGSG
        SGYGSGSG
Subjt:  SGYGSGSG

A0A0A0LML4 Uncharacterized protein4.7e-2682.83Show/hide
Query:  MACSRAIGATLLALFLVDLAFAARSPREAFGRGGGGGGGGGSGGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAYGRGGGGGGGGGSGGGGGGGIGS
        MA +RAIGATLLALFLVDLAFAARSPR+ FG GGG GGGGGS GGGGGGGLFPGSGY  G+GSGGGEGYGEGEGDGA+GRGGGGGGG G GGGGG G G 
Subjt:  MACSRAIGATLLALFLVDLAFAARSPREAFGRGGGGGGGGGSGGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAYGRGGGGGGGGGSGGGGGGGIGS

Query:  GSGFGSGSGSGFGSGGGRGGGGGGGGGRGGGGGGGSGNGSGYGSGYGSGGGYGSGSGRGGGGGGGGGGGGGGGSSGSGS--GSGYGSGYGSGSGGWNE
        GSGFGSGSGSGF    G+ GGGGGG G GGGGG G GNGSGYGSGYGSGGGYGSG   GGGGGGGGGGGGGGGSSG+GS  GSGYGSGYGSG GGW E
Subjt:  GSGFGSGSGSGFGSGGGRGGGGGGGGGRGGGGGGGSGNGSGYGSGYGSGGGYGSGSGRGGGGGGGGGGGGGGGSSGSGS--GSGYGSGYGSGSGGWNE

A0A1R3IXG4 Uncharacterized protein6.9e-1775.88Show/hide
Query:  MACSRAIGATLLALFLVDLAFAARSPREAFGRGGGGGGGGGSGGGGGGG---GLFPGSGYGSGFGSGGGEGYGEGEGDGAYGRGGGGGGGGGSGGGGGGG
        M  SR IGA  L L  VDLAFAARS  +  G+GGGGGGGGGSGGGGGGG   GL  GSGYGSG+GSG G GYG G G G    GGGGGGGGG GGGGGG 
Subjt:  MACSRAIGATLLALFLVDLAFAARSPREAFGRGGGGGGGGGSGGGGGGG---GLFPGSGYGSGFGSGGGEGYGEGEGDGAYGRGGGGGGGGGSGGGGGGG

Query:  IGSGSGFGSGSGSGFGSGGGRGGGGGGGGGRGGGGGGGSGN----GSGYGSGYGSGGGYGSGSGRGGGGGGGGGGGGGGGSSGSGSGSGYGSGYGSGSG
         GSGSG+GSGSGSG+GSGGG GGGGGGGGGRGGGGGGG GN    GSGYGSGYGSG GYGSG G+GGGGGGGGGGGGGGG  G G+GSG+GSGYGSGSG
Subjt:  IGSGSGFGSGSGSGFGSGGGRGGGGGGGGGRGGGGGGGSGN----GSGYGSGYGSGGGYGSGSGRGGGGGGGGGGGGGGGSSGSGSGSGYGSGYGSGSG

A0A1S3C3P6 glycine-rich cell wall structural protein 2-like6.6e-2883.84Show/hide
Query:  MACSRAIGATLLALFLVDLAFAARSPREAFGRGGGGGGGGGSGGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAYGRGGGGGGGGGSGGGGGGGIGS
        MA +RAIG TLLALFLVDLAFAAR+PR+ FG GGG GGGGGS GGGGGGGLFPGSGY  GFGSGGGEGYGEGEGDGA+GRGGGGGGG G GGGGG G G 
Subjt:  MACSRAIGATLLALFLVDLAFAARSPREAFGRGGGGGGGGGSGGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAYGRGGGGGGGGGSGGGGGGGIGS

Query:  GSGFGSGSGSGFGSGGGRGGGGGGGGGRGGGGGGGSGNGSGYGSGYGSGGGYGSGSGRGGGGGGGGGGGGGGGSSGSGS--GSGYGSGYGSGSGGWNE
        GSGFG+GSGSGFG GG  GGGGGGG G GGGGG G GNGSGYGSGYGSGGGYGSG GRGGGGGGGGGGGGGGGS+G+GS  GSGYGSGYGSG GGW E
Subjt:  GSGFGSGSGSGFGSGGGRGGGGGGGGGRGGGGGGGSGNGSGYGSGYGSGGGYGSGSGRGGGGGGGGGGGGGGGSSGSGS--GSGYGSGYGSGSGGWNE

A0A6J1FLU7 glycine-rich cell wall structural protein 2-like5.2e-2577.94Show/hide
Query:  MACSRAIGATLLALFLVDLAFAARSPREAFGRGGGGGGGGGSGGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAYGRGGGGGGGGGSGGGGGGGIGS
        MACSRA+G  LLALFLVD AFAARSPR AFG GGGG      GGGGGGGGLF GSGYGSGFGSGGGEGYGEG+GDG +GRGGGGG GG  GGGGGGG GS
Subjt:  MACSRAIGATLLALFLVDLAFAARSPREAFGRGGGGGGGGGSGGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAYGRGGGGGGGGGSGGGGGGGIGS

Query:  GSGFGSGSGSGFGSGGGRGGGGGGGGGRGGGGGGGSGNGSGYGSGYGSGGGYGSGSGRGGGGGGGGGGGGGGG--------SSGSGSGSGYGSGYGSGSG
         SGFGSGSGSGFG G G GGGGG GGG GGGGG G GNGSGYGSGYGSG G+GSGSGRGGGGGGG GGGGGGG         SGSG GS YGSGYGSG  
Subjt:  GSGFGSGSGSGFGSGGGRGGGGGGGGGRGGGGGGGSGNGSGYGSGYGSGGGYGSGSGRGGGGGGGGGGGGGGG--------SSGSGSGSGYGSGYGSGSG

Query:  GWNE
        GW E
Subjt:  GWNE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTGCAGCAGGGCGATTGGGGCTACATTGTTGGCTTTGTTCCTCGTGGACCTCGCCTTCGCCGCCCGATCGCCGAGGGAAGCGTTCGGTCGAGGAGGAGGAGGTGG
AGGCGGTGGTGGAAGCGGCGGAGGAGGAGGTGGAGGAGGACTATTTCCGGGTTCGGGGTATGGCTCCGGTTTTGGATCGGGCGGAGGGGAAGGATACGGTGAGGGAGAAG
GCGACGGGGCGTACGGGAGAGGAGGCGGCGGCGGAGGAGGAGGAGGAAGTGGTGGTGGAGGTGGGGGTGGAATAGGGTCCGGATCCGGATTCGGATCTGGAAGCGGCTCA
GGGTTTGGTTCTGGCGGTGGAAGAGGCGGCGGCGGTGGAGGAGGTGGCGGCAGGGGAGGAGGAGGCGGAGGAGGCTCCGGAAACGGATCAGGCTATGGCTCGGGATACGG
CAGTGGAGGCGGATATGGAAGCGGGAGCGGCAGAGGAGGCGGCGGTGGTGGAGGCGGTGGAGGAGGCGGTGGCGGAGGTTCCTCCGGCTCCGGGAGTGGCTCTGGCTATG
GTTCGGGCTACGGATCCGGAAGCGGAGGATGGAACGAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTGCAGCAGGGCGATTGGGGCTACATTGTTGGCTTTGTTCCTCGTGGACCTCGCCTTCGCCGCCCGATCGCCGAGGGAAGCGTTCGGTCGAGGAGGAGGAGGTGG
AGGCGGTGGTGGAAGCGGCGGAGGAGGAGGTGGAGGAGGACTATTTCCGGGTTCGGGGTATGGCTCCGGTTTTGGATCGGGCGGAGGGGAAGGATACGGTGAGGGAGAAG
GCGACGGGGCGTACGGGAGAGGAGGCGGCGGCGGAGGAGGAGGAGGAAGTGGTGGTGGAGGTGGGGGTGGAATAGGGTCCGGATCCGGATTCGGATCTGGAAGCGGCTCA
GGGTTTGGTTCTGGCGGTGGAAGAGGCGGCGGCGGTGGAGGAGGTGGCGGCAGGGGAGGAGGAGGCGGAGGAGGCTCCGGAAACGGATCAGGCTATGGCTCGGGATACGG
CAGTGGAGGCGGATATGGAAGCGGGAGCGGCAGAGGAGGCGGCGGTGGTGGAGGCGGTGGAGGAGGCGGTGGCGGAGGTTCCTCCGGCTCCGGGAGTGGCTCTGGCTATG
GTTCGGGCTACGGATCCGGAAGCGGAGGATGGAACGAG
Protein sequenceShow/hide protein sequence
MACSRAIGATLLALFLVDLAFAARSPREAFGRGGGGGGGGGSGGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAYGRGGGGGGGGGSGGGGGGGIGSGSGFGSGSGS
GFGSGGGRGGGGGGGGGRGGGGGGGSGNGSGYGSGYGSGGGYGSGSGRGGGGGGGGGGGGGGGSSGSGSGSGYGSGYGSGSGGWNE