; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010107 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010107
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR1
Genome locationscaffold779:699700..700074
RNA-Seq ExpressionMS010107
SyntenyMS010107
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022133553.1 cyclin-dependent protein kinase inhibitor SMR1 [Momordica charantia]6.4e-6398.43Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPKPSNSDNIPSDRD--GGGGCGGGEVDRGCRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE
        MSMDLEFPKNLPKIRLPLQVRSPKPSNSDNIPSDRD  GGGGCGGGEVDRGCRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPKPSNSDNIPSDRD--GGGGCGGGEVDRGCRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE

Query:  VDNFFRSAYDLEASTAAPTKRSCCRSA
        VDNFFRSAYDLEASTAAPTKRSCCRSA
Subjt:  VDNFFRSAYDLEASTAAPTKRSCCRSA

XP_022923009.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita moschata]2.0e-4882.31Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRS-PKPSNSDNIP---SDRDGGGGCGGGEVD-RGCRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVN
        MSMDLEFP+NLPKIRLPLQVRS PKPSNS NIP   SD D      G ++D RGCRTPTSAEHKIPKI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VN
Subjt:  MSMDLEFPKNLPKIRLPLQVRS-PKPSNSDNIP---SDRDGGGGCGGGEVD-RGCRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVN

Query:  QEEVDNFFRSAYDLEASTAAPTKRSCCRSA
        QEEVDNFFRSAYDLEAS+ AP+KRSCCRSA
Subjt:  QEEVDNFFRSAYDLEASTAAPTKRSCCRSA

XP_022990487.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima]1.2e-4883.08Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRS-PKPSNSDNIP---SDRDGGGGCGGGEVD-RGCRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVN
        MSMDLEFP+NLPKIRLPLQVRS PKPSNS NIP   SD D      G ++D RGCRTPTSAEHKIPKI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VN
Subjt:  MSMDLEFPKNLPKIRLPLQVRS-PKPSNSDNIP---SDRDGGGGCGGGEVD-RGCRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVN

Query:  QEEVDNFFRSAYDLEASTAAPTKRSCCRSA
        QEEVDNFFRSAYDLEAS+AAP KRSCCRSA
Subjt:  QEEVDNFFRSAYDLEASTAAPTKRSCCRSA

XP_023521119.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo]3.4e-4882.31Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRS-PKPSNSDNIP---SDRDGGGGCGGGEVD-RGCRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVN
        MSMDLEFP+NLPKIRLPLQVRS PKPSNS NIP   SD D      G ++D RGCRTPTSAEHKIPKI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VN
Subjt:  MSMDLEFPKNLPKIRLPLQVRS-PKPSNSDNIP---SDRDGGGGCGGGEVD-RGCRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVN

Query:  QEEVDNFFRSAYDLEASTAAPTKRSCCRSA
        QEEVDNFFRSAYDLEAS+ AP KRSCCRSA
Subjt:  QEEVDNFFRSAYDLEASTAAPTKRSCCRSA

XP_038884240.1 cyclin-dependent protein kinase inhibitor SMR1-like [Benincasa hispida]9.9e-4882.95Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRS-PKPSNSDNIP---SDRDGGGGCGGGEVD-RGCRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVN
        MSMDLEFPKNLPKIRLPLQVRS PKPS SDNIP   SDRD        ++D R CRTPTSAEHKIPKI+SCPGAPKKPKRPPVPCKRKLTMELKFFEIVN
Subjt:  MSMDLEFPKNLPKIRLPLQVRS-PKPSNSDNIP---SDRDGGGGCGGGEVD-RGCRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVN

Query:  QEEVDNFFRSAYDLEASTAAPTKRSCCRS
        QEEVDNFFRSAYDLEAS+ AP KR+CCRS
Subjt:  QEEVDNFFRSAYDLEASTAAPTKRSCCRS

TrEMBL top hitse value%identityAlignment
A0A0A0LSQ6 Uncharacterized protein4.5e-4681.89Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRS-PKPSNSDNI--PSDRDGGGGCGGGEVD-RGCRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQ
        MSMDLEFPKNLPKIRLPLQVRS PKPS SDNI   SD D        ++D R CRTPTSAEHKIPKI+SCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQ
Subjt:  MSMDLEFPKNLPKIRLPLQVRS-PKPSNSDNI--PSDRDGGGGCGGGEVD-RGCRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQ

Query:  EEVDNFFRSAYDLEASTAAPTKRSCCR
        EEVDNFFRSAYDLE+S  AP KRSCCR
Subjt:  EEVDNFFRSAYDLEASTAAPTKRSCCR

A0A5A7UMQ0 Cyclin-dependent protein kinase inhibitor SMR1-like5.9e-4681.1Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRS-PKPSNSDNI--PSDRDGGGGCGGGEVD-RGCRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQ
        MSMDLEFPKNLPKIRLPLQVRS PKPS SDNI   SD D        ++D R CRTPTSAEHKIPKI+SCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQ
Subjt:  MSMDLEFPKNLPKIRLPLQVRS-PKPSNSDNI--PSDRDGGGGCGGGEVD-RGCRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQ

Query:  EEVDNFFRSAYDLEASTAAPTKRSCCR
        EEVDNFFRSAYDLE+S+ AP KR+CCR
Subjt:  EEVDNFFRSAYDLEASTAAPTKRSCCR

A0A6J1BZG0 cyclin-dependent protein kinase inhibitor SMR13.1e-6398.43Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPKPSNSDNIPSDRD--GGGGCGGGEVDRGCRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE
        MSMDLEFPKNLPKIRLPLQVRSPKPSNSDNIPSDRD  GGGGCGGGEVDRGCRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPKPSNSDNIPSDRD--GGGGCGGGEVDRGCRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE

Query:  VDNFFRSAYDLEASTAAPTKRSCCRSA
        VDNFFRSAYDLEASTAAPTKRSCCRSA
Subjt:  VDNFFRSAYDLEASTAAPTKRSCCRSA

A0A6J1E540 cyclin-dependent protein kinase inhibitor SMR1-like9.7e-4982.31Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRS-PKPSNSDNIP---SDRDGGGGCGGGEVD-RGCRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVN
        MSMDLEFP+NLPKIRLPLQVRS PKPSNS NIP   SD D      G ++D RGCRTPTSAEHKIPKI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VN
Subjt:  MSMDLEFPKNLPKIRLPLQVRS-PKPSNSDNIP---SDRDGGGGCGGGEVD-RGCRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVN

Query:  QEEVDNFFRSAYDLEASTAAPTKRSCCRSA
        QEEVDNFFRSAYDLEAS+ AP+KRSCCRSA
Subjt:  QEEVDNFFRSAYDLEASTAAPTKRSCCRSA

A0A6J1JIW3 cyclin-dependent protein kinase inhibitor SMR1-like5.7e-4983.08Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRS-PKPSNSDNIP---SDRDGGGGCGGGEVD-RGCRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVN
        MSMDLEFP+NLPKIRLPLQVRS PKPSNS NIP   SD D      G ++D RGCRTPTSAEHKIPKI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VN
Subjt:  MSMDLEFPKNLPKIRLPLQVRS-PKPSNSDNIP---SDRDGGGGCGGGEVD-RGCRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVN

Query:  QEEVDNFFRSAYDLEASTAAPTKRSCCRSA
        QEEVDNFFRSAYDLEAS+AAP KRSCCRSA
Subjt:  QEEVDNFFRSAYDLEASTAAPTKRSCCRSA

SwissProt top hitse value%identityAlignment
Q9LPP4 Cyclin-dependent protein kinase inhibitor SMR15.0e-1040.74Show/hide
Query:  MDLEFPKNLPKIRL--PLQVRSPKPSNSDNIPSDRDGGGGCGGGEVDRGCRTPTSAEHKIPKIV-SCPGAPKKPKRPPV-----------PCKRKL---T
        MDLE  ++L K     P+++RS K S +     D D        E D  C TPTS EHKIP +V S P  P+KP+ PP             CKRKL   T
Subjt:  MDLEFPKNLPKIRL--PLQVRSPKPSNSDNIPSDRDGGGGCGGGEVDRGCRTPTSAEHKIPKIV-SCPGAPKKPKRPPV-----------PCKRKL---T

Query:  MELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRS
         E+    I+N+EE+D FF S Y+ E ST A  +RS
Subjt:  MELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRS

Q9LZ60 Cyclin-dependent protein kinase inhibitor SMR39.1e-0434.74Show/hide
Query:  KNLPKIRLPLQVRSPKPSNSDNIPSDRDGGGGCGGGEVDRGCRTPTSAEHKIP--KIVSCPGAPKKPK-RPPVPCKRKLTMELKFFEIVNQEEVD
        +++ KIRLP +     P +    P+  +          + GC+TPTS++HKIP  K   CP AP+KPK       KRKLT       +VN+  +D
Subjt:  KNLPKIRLPLQVRSPKPSNSDNIPSDRDGGGGCGGGEVDRGCRTPTSAEHKIP--KIVSCPGAPKKPK-RPPVPCKRKLTMELKFFEIVNQEEVD

Q9LZ78 Cyclin-dependent protein kinase inhibitor SIM4.2e-0934.4Show/hide
Query:  MDLEFPKNLPKIRLPLQVRSPKPSNSDNIPSDRDGGGGCGGGEVDRGCRTPTSAEHKIPKIVSC--PGAPKKPKRPPVP-------CKRKLTMELKFFE-
        MDL+  ++LP +  P  ++    +N D+     DGG          GC TPTS++HKIP   +   P  P+KP+ P  P       CKRKL   L  +E 
Subjt:  MDLEFPKNLPKIRLPLQVRSPKPSNSDNIPSDRDGGGGCGGGEVDRGCRTPTSAEHKIPKIVSC--PGAPKKPKRPPVP-------CKRKLTMELKFFE-

Query:  IVNQEEVDNFFRSAYDLEASTAAPT
        IVN++E++ FF S Y+   +++  T
Subjt:  IVNQEEVDNFFRSAYDLEASTAAPT

Q9SGE2 Cyclin-dependent protein kinase inhibitor SMR24.1e-0441.82Show/hide
Query:  TPTSAEHKIPKIVSCPGAP-KKPKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF
        TPTS++HKIP++ +CP  P K+P+   +  K +L+ +L+FFE   V  +EV+  F
Subjt:  TPTSAEHKIPKIVSCPGAP-KKPKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF

Arabidopsis top hitse value%identityAlignment
AT1G08180.1 unknown protein2.9e-0541.82Show/hide
Query:  TPTSAEHKIPKIVSCPGAP-KKPKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF
        TPTS++HKIP++ +CP  P K+P+   +  K +L+ +L+FFE   V  +EV+  F
Subjt:  TPTSAEHKIPKIVSCPGAP-KKPKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF

AT3G10525.1 LOSS OF GIANT CELLS FROM ORGANS3.5e-1140.74Show/hide
Query:  MDLEFPKNLPKIRL--PLQVRSPKPSNSDNIPSDRDGGGGCGGGEVDRGCRTPTSAEHKIPKIV-SCPGAPKKPKRPPV-----------PCKRKL---T
        MDLE  ++L K     P+++RS K S +     D D        E D  C TPTS EHKIP +V S P  P+KP+ PP             CKRKL   T
Subjt:  MDLEFPKNLPKIRL--PLQVRSPKPSNSDNIPSDRDGGGGCGGGEVDRGCRTPTSAEHKIPKIV-SCPGAPKKPKRPPV-----------PCKRKL---T

Query:  MELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRS
         E+    I+N+EE+D FF S Y+ E ST A  +RS
Subjt:  MELKFFEIVNQEEVDNFFRSAYDLEASTAAPTKRS

AT5G02420.1 unknown protein6.5e-0534.74Show/hide
Query:  KNLPKIRLPLQVRSPKPSNSDNIPSDRDGGGGCGGGEVDRGCRTPTSAEHKIP--KIVSCPGAPKKPK-RPPVPCKRKLTMELKFFEIVNQEEVD
        +++ KIRLP +     P +    P+  +          + GC+TPTS++HKIP  K   CP AP+KPK       KRKLT       +VN+  +D
Subjt:  KNLPKIRLPLQVRSPKPSNSDNIPSDRDGGGGCGGGEVDRGCRTPTSAEHKIP--KIVSCPGAPKKPK-RPPVPCKRKLTMELKFFEIVNQEEVD

AT5G04470.1 cyclin-dependent protein kinase inhibitors3.0e-1034.4Show/hide
Query:  MDLEFPKNLPKIRLPLQVRSPKPSNSDNIPSDRDGGGGCGGGEVDRGCRTPTSAEHKIPKIVSC--PGAPKKPKRPPVP-------CKRKLTMELKFFE-
        MDL+  ++LP +  P  ++    +N D+     DGG          GC TPTS++HKIP   +   P  P+KP+ P  P       CKRKL   L  +E 
Subjt:  MDLEFPKNLPKIRLPLQVRSPKPSNSDNIPSDRDGGGGCGGGEVDRGCRTPTSAEHKIPKIVSC--PGAPKKPKRPPVP-------CKRKLTMELKFFE-

Query:  IVNQEEVDNFFRSAYDLEASTAAPT
        IVN++E++ FF S Y+   +++  T
Subjt:  IVNQEEVDNFFRSAYDLEASTAAPT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATGGACCTGGAATTCCCCAAAAATCTCCCCAAAATCCGCCTCCCTTTGCAGGTCCGATCCCCCAAACCCTCCAATTCCGACAACATACCCTCCGATCGCGACGG
CGGCGGCGGCTGCGGCGGCGGAGAAGTTGACCGCGGCTGCCGGACGCCGACCTCGGCCGAGCACAAGATTCCGAAGATCGTCAGCTGTCCTGGAGCGCCGAAGAAGCCGA
AGAGGCCGCCGGTGCCCTGCAAGAGGAAGTTGACCATGGAGCTCAAGTTCTTCGAGATCGTTAACCAAGAAGAGGTCGACAACTTCTTCCGATCCGCTTACGATCTCGAA
GCTTCCACGGCGGCGCCGACGAAGAGGAGCTGCTGCCGGTCAGCC
mRNA sequenceShow/hide mRNA sequence
ATGTCCATGGACCTGGAATTCCCCAAAAATCTCCCCAAAATCCGCCTCCCTTTGCAGGTCCGATCCCCCAAACCCTCCAATTCCGACAACATACCCTCCGATCGCGACGG
CGGCGGCGGCTGCGGCGGCGGAGAAGTTGACCGCGGCTGCCGGACGCCGACCTCGGCCGAGCACAAGATTCCGAAGATCGTCAGCTGTCCTGGAGCGCCGAAGAAGCCGA
AGAGGCCGCCGGTGCCCTGCAAGAGGAAGTTGACCATGGAGCTCAAGTTCTTCGAGATCGTTAACCAAGAAGAGGTCGACAACTTCTTCCGATCCGCTTACGATCTCGAA
GCTTCCACGGCGGCGCCGACGAAGAGGAGCTGCTGCCGGTCAGCC
Protein sequenceShow/hide protein sequence
MSMDLEFPKNLPKIRLPLQVRSPKPSNSDNIPSDRDGGGGCGGGEVDRGCRTPTSAEHKIPKIVSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLE
ASTAAPTKRSCCRSA