CuGenDBv2

Gene ID	MS010109
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ATP synthase subunit alpha, chloroplastic
Genome location	scaffold779:714269..714370
RNA-Seq Expression	MS010109
Synteny	MS010109
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0005524 - ATP binding (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function) GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

QNN85384.1 ATP synthase CF1 alpha subunit [Camellia sinensis]

2.5e-06

88.24

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Query:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ
        DVFYLHSRLLE   KSSSPLGEGSM ALPIVETQ
Subjt:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ

QYH50661.1 ATP synthase CF1 alpha subunit [Aristolochia bracteolata]

2.5e-06

88.24

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Query:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ
        DVFYLHSRLLE   KSSSPLGEGSM ALPIVETQ
Subjt:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ

YP_009236266.1 ATP synthase CF1 alpha subunit [Gynostemma pentaphyllum]

2.5e-06

88.24

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Query:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ
        DVFYLHSRLLE   KSSSPLGEGSM ALPIVETQ
Subjt:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ

YP_009336022.1 ATP synthase CF1 alpha subunit [Ulmus davidiana]

2.5e-06

88.24

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Query:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ
        DVFYLHSRLLE   KSSSPLGEGSM ALPIVETQ
Subjt:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ

YP_009488497.1 ATP synthase CF1 alpha subunit [Ulmus gaussenii]

2.5e-06

88.24

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Query:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ
        DVFYLHSRLLE   KSSSPLGEGSM ALPIVETQ
Subjt:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ

TrEMBL top hits

e value

%identity

Alignment

A0A075TQ03 ATP synthase subunit alpha

1.2e-06

88.24

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Query:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ
        DVFYLHSRLLE   KSSSPLGEGSM ALPIVETQ
Subjt:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ

A0A075TQN1 ATP synthase subunit alpha, chloroplastic

1.2e-06

88.24

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Query:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ
        DVFYLHSRLLE   KSSSPLGEGSM ALPIVETQ
Subjt:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ

A0A109WWJ5 ATP synthase subunit alpha, chloroplastic

1.2e-06

88.24

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Query:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ
        DVFYLHSRLLE   KSSSPLGEGSM ALPIVETQ
Subjt:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ

A0A1L5YE57 ATP synthase subunit alpha, chloroplastic

1.2e-06

88.24

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Query:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ
        DVFYLHSRLLE   KSSSPLGEGSM ALPIVETQ
Subjt:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ

A0A649UJL1 ATP synthase subunit alpha, chloroplastic

1.2e-06

88.24

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Query:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ
        DVFYLHSRLLE   KSSSPLGEGSM ALPIVETQ
Subjt:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ

SwissProt top hits

e value

%identity

Alignment

A0ZZ20 ATP synthase subunit alpha, chloroplastic

2.8e-08

85.29

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Query:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ
        DVFYLHSRLLE   KSSS LGEGSM ALPIVETQ
Subjt:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ

A7Y3A4 ATP synthase subunit alpha, chloroplastic

2.8e-08

85.29

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Query:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ
        DVFYLHSRLLE   KSSS LGEGSM ALPIVETQ
Subjt:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ

Q06FX6 ATP synthase subunit alpha, chloroplastic

2.8e-08

85.29

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Query:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ
        DVFYLHSRLLE   KSSS LGEGSM ALPIVETQ
Subjt:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ

Q2L8Z1 ATP synthase subunit alpha, chloroplastic

2.8e-08

85.29

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Query:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ
        DVFYLHSRLLE   KSSS LGEGSM ALPIVETQ
Subjt:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ

Q7YJY4 ATP synthase subunit alpha, chloroplastic

1.7e-08

85.29

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Query:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ
        DVFYLHSRLLE   K SSPLGEGSM ALPIVETQ
Subjt:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ

Arabidopsis top hits

e value

%identity

Alignment

AT2G07698.1 ATPase, F1 complex, alpha subunit protein

1.6e-06

64.71

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Query:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ
        DVFYLHSRLLE   K S   G GS+ ALP++ETQ
Subjt:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ

ATCG00120.1 ATP synthase subunit alpha

1.0e-08

82.35

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Query:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ
        DVFYLHSRLLE   K SS LGEGSM ALPIVETQ
Subjt:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ

ATMG01190.1 ATP synthase subunit 1

1.6e-06

64.71

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Query:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ
        DVFYLHSRLLE   K S   G GS+ ALP++ETQ
Subjt:  DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ

Sequences

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CDS sequence

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GATGTTTTTTATTTGCATTCACGCCTATTAGAAATAACCACTAAATCAAGTTCTCCCTTAGGTGAAGGAAGTATGATTGCTTTACCAATAGTCGAAACCCAA

mRNA sequence

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GATGTTTTTTATTTGCATTCACGCCTATTAGAAATAACCACTAAATCAAGTTCTCCCTTAGGTGAAGGAAGTATGATTGCTTTACCAATAGTCGAAACCCAA

Protein sequence

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DVFYLHSRLLEITTKSSSPLGEGSMIALPIVETQ

MS010109 (gene) of Bitter gourd (TR) v1 genome