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MS010145 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010145
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAxoneme-associated protein MST101(2) protein
Genome locationscaffold391:229121..229733
RNA-Seq ExpressionMS010145
SyntenyMS010145
Gene Ontology termsGO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR027973 - Protein of unknown function DUF4602


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061754.1 uncharacterized protein E6C27_scaffold212G001320 [Cucumis melo var. makuwa]2.6e-4472.85Show/hide
Query:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNLGQ----SSGNNSRRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLL---
        MSWKDKKEIE+RKIVSLGGKPQKKQ+LPLSVARPIMKKQKEREQKM++E  ++GQ    +S +NSR+S GKR+PE+QVL+ SEG F++GVLDVKHLL   
Subjt:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNLGQ----SSGNNSRRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLL---

Query:  ---HRAPTRNTDFAPIRNTDFGNDMVGKGRRKGGKKK-NKSKKKGGGKKRH
           +  P+RN+D  P RNTDFGN+M GKGRRKGGKKK NKSKKKGGGKKRH
Subjt:  ---HRAPTRNTDFAPIRNTDFGNDMVGKGRRKGGKKK-NKSKKKGGGKKRH

XP_004140183.1 uncharacterized protein LOC101203308 [Cucumis sativus]8.2e-4371.14Show/hide
Query:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNL----GQSSGNNSRRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLLHRA
        MSWKDKKEIE+RKIVSLGGKPQKKQ+LPLSVARPIMKKQKEREQKM++E  ++    G +S +NSR+S GKR+PE+QVL+ SEG F++GVLDVKHLL  +
Subjt:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNL----GQSSGNNSRRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLLHRA

Query:  PTRNTDFA----PIRNTDFGNDMVGKGRRKGGKKK-NKSKKKGGGKKRH
         +RN   +    P RNTDFGN+M G GRRKGGKKK NKSKKKGGGKKRH
Subjt:  PTRNTDFA----PIRNTDFGNDMVGKGRRKGGKKK-NKSKKKGGGKKRH

XP_008449630.1 PREDICTED: uncharacterized protein LOC103491457 [Cucumis melo]7.4e-4472.19Show/hide
Query:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNL----GQSSGNNSRRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLL---
        MSWKDKKEIE+RKIVSLGGKPQKKQ+LPLSVARPIMKKQKEREQKM++E  ++    G +S +NSR+S GKR+PE+QVL+ SEG F++GVLDVKHLL   
Subjt:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNL----GQSSGNNSRRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLL---

Query:  ---HRAPTRNTDFAPIRNTDFGNDMVGKGRRKGGKKK-NKSKKKGGGKKRH
           +  P+RN+D  P RNTDFGN+M GKGRRKGGKKK NKSKKKGGGKKRH
Subjt:  ---HRAPTRNTDFAPIRNTDFGNDMVGKGRRKGGKKK-NKSKKKGGGKKRH

XP_022152964.1 uncharacterized protein LOC111020577 [Momordica charantia]6.2e-67100Show/hide
Query:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNLGQSSGNNSRRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLLHRAPTRN
        MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNLGQSSGNNSRRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLLHRAPTRN
Subjt:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNLGQSSGNNSRRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLLHRAPTRN

Query:  TDFAPIRNTDFGNDMVGKGRRKGGKKKNKSKKKGGGKKRH
        TDFAPIRNTDFGNDMVGKGRRKGGKKKNKSKKKGGGKKRH
Subjt:  TDFAPIRNTDFGNDMVGKGRRKGGKKKNKSKKKGGGKKRH

XP_038900589.1 uncharacterized protein LOC120087770 isoform X1 [Benincasa hispida]1.4e-4270.86Show/hide
Query:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNL----GQSSGNNSRRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLL---
        MSWKD+KEIE+RKIVSLGGKPQKKQ+LPLSVARPIMKKQKEREQKM++E  N+    G +  +NSRRS+G+RKPE+QVL+ SEG F++GVLDVKHLL   
Subjt:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNL----GQSSGNNSRRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLL---

Query:  ---HRAPTRNTDFAPIRNTDFGNDMVGKGRRKGGKKKN-KSKKKGGGKKRH
           +  P RN+D  P RNTDFGN+M  KGRRKGGKKK+ KSKKKGGGKKRH
Subjt:  ---HRAPTRNTDFAPIRNTDFGNDMVGKGRRKGGKKKN-KSKKKGGGKKRH

TrEMBL top hitse value%identityAlignment
A0A0A0KEY3 Uncharacterized protein4.0e-4371.14Show/hide
Query:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNL----GQSSGNNSRRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLLHRA
        MSWKDKKEIE+RKIVSLGGKPQKKQ+LPLSVARPIMKKQKEREQKM++E  ++    G +S +NSR+S GKR+PE+QVL+ SEG F++GVLDVKHLL  +
Subjt:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNL----GQSSGNNSRRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLLHRA

Query:  PTRNTDFA----PIRNTDFGNDMVGKGRRKGGKKK-NKSKKKGGGKKRH
         +RN   +    P RNTDFGN+M G GRRKGGKKK NKSKKKGGGKKRH
Subjt:  PTRNTDFA----PIRNTDFGNDMVGKGRRKGGKKK-NKSKKKGGGKKRH

A0A1S3BNE0 uncharacterized protein LOC1034914573.6e-4472.19Show/hide
Query:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNL----GQSSGNNSRRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLL---
        MSWKDKKEIE+RKIVSLGGKPQKKQ+LPLSVARPIMKKQKEREQKM++E  ++    G +S +NSR+S GKR+PE+QVL+ SEG F++GVLDVKHLL   
Subjt:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNL----GQSSGNNSRRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLL---

Query:  ---HRAPTRNTDFAPIRNTDFGNDMVGKGRRKGGKKK-NKSKKKGGGKKRH
           +  P+RN+D  P RNTDFGN+M GKGRRKGGKKK NKSKKKGGGKKRH
Subjt:  ---HRAPTRNTDFAPIRNTDFGNDMVGKGRRKGGKKK-NKSKKKGGGKKRH

A0A5A7V3A9 Uncharacterized protein1.2e-4472.85Show/hide
Query:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNLGQ----SSGNNSRRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLL---
        MSWKDKKEIE+RKIVSLGGKPQKKQ+LPLSVARPIMKKQKEREQKM++E  ++GQ    +S +NSR+S GKR+PE+QVL+ SEG F++GVLDVKHLL   
Subjt:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNLGQ----SSGNNSRRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLL---

Query:  ---HRAPTRNTDFAPIRNTDFGNDMVGKGRRKGGKKK-NKSKKKGGGKKRH
           +  P+RN+D  P RNTDFGN+M GKGRRKGGKKK NKSKKKGGGKKRH
Subjt:  ---HRAPTRNTDFAPIRNTDFGNDMVGKGRRKGGKKK-NKSKKKGGGKKRH

A0A6J1DHM3 uncharacterized protein LOC1110205773.0e-67100Show/hide
Query:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNLGQSSGNNSRRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLLHRAPTRN
        MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNLGQSSGNNSRRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLLHRAPTRN
Subjt:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNLGQSSGNNSRRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLLHRAPTRN

Query:  TDFAPIRNTDFGNDMVGKGRRKGGKKKNKSKKKGGGKKRH
        TDFAPIRNTDFGNDMVGKGRRKGGKKKNKSKKKGGGKKRH
Subjt:  TDFAPIRNTDFGNDMVGKGRRKGGKKKNKSKKKGGGKKRH

A0A6J1FZ06 uncharacterized protein LOC1114491251.2e-4273.1Show/hide
Query:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNL----GQSSGNNSRRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLLHRA
        MSWKDKKEIE+RKIVSLGGKPQKKQ+LPLSVARPIMKKQKEREQKM++E  N+    G +S N+SR S+GKRKPE+QVL+ SEG F++GVLDVKHLL  A
Subjt:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNL----GQSSGNNSRRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLLHRA

Query:  PTRNTDFAPIRNTDFGNDMVGKGRRKGGKKK-NKSKKKGGGKKRH
        P+        RN+DFGN+M GKGRRKGGKKK NKS KKGGGKKRH
Subjt:  PTRNTDFAPIRNTDFGNDMVGKGRRKGGKKK-NKSKKKGGGKKRH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G44820.1 unknown protein1.0e-2751.63Show/hide
Query:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNLGQSSGNNS---RRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLLHRAP
        M+WKDKK +E++K+ +LGGK QK  +LPLSVAR  MKKQK+RE+KM+E+ + LG+  G  S   + +  KR PE++VL+ + GIF+ GVLDVKHLL   P
Subjt:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNLGQSSGNNS---RRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLLHRAP

Query:  TRNTD-----FAPIR---NTDFGNDMVG---KGRRKGGKKKNKSKKKGGGKKR
        + ++D       P R   N   G D  G   KG++KGGK KNK KKKGGGKKR
Subjt:  TRNTD-----FAPIR---NTDFGNDMVG---KGRRKGGKKKNKSKKKGGGKKR

AT2G44820.2 unknown protein1.0e-2751.63Show/hide
Query:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNLGQSSGNNS---RRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLLHRAP
        M+WKDKK +E++K+ +LGGK QK  +LPLSVAR  MKKQK+RE+KM+E+ + LG+  G  S   + +  KR PE++VL+ + GIF+ GVLDVKHLL   P
Subjt:  MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNLGQSSGNNS---RRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLLHRAP

Query:  TRNTD-----FAPIR---NTDFGNDMVG---KGRRKGGKKKNKSKKKGGGKKR
        + ++D       P R   N   G D  G   KG++KGGK KNK KKKGGGKKR
Subjt:  TRNTD-----FAPIR---NTDFGNDMVG---KGRRKGGKKKNKSKKKGGGKKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATGGAAAGACAAAAAGGAGATTGAGAACAGAAAAATTGTCTCTCTGGGTGGAAAGCCTCAAAAGAAACAAAAACTACCTCTAAGTGTAGCACGACCAATTATGAA
GAAACAGAAGGAAAGAGAACAAAAGATGATGGAAGAGCGTTTGAATCTTGGACAATCTAGTGGCAATAATTCTAGAAGATCTATGGGTAAGCGCAAGCCCGAGGACCAGG
TTCTTAGGCCGAGCGAAGGCATTTTTAGAAATGGAGTGCTTGATGTCAAGCATCTACTACACCGTGCTCCTACTAGGAATACTGACTTTGCTCCTATTAGGAATACCGAC
TTTGGAAACGATATGGTCGGTAAAGGTAGAAGGAAGGGAGGGAAAAAGAAGAATAAAAGTAAGAAAAAGGGTGGCGGTAAGAAACGCCAC
mRNA sequenceShow/hide mRNA sequence
ATGTCATGGAAAGACAAAAAGGAGATTGAGAACAGAAAAATTGTCTCTCTGGGTGGAAAGCCTCAAAAGAAACAAAAACTACCTCTAAGTGTAGCACGACCAATTATGAA
GAAACAGAAGGAAAGAGAACAAAAGATGATGGAAGAGCGTTTGAATCTTGGACAATCTAGTGGCAATAATTCTAGAAGATCTATGGGTAAGCGCAAGCCCGAGGACCAGG
TTCTTAGGCCGAGCGAAGGCATTTTTAGAAATGGAGTGCTTGATGTCAAGCATCTACTACACCGTGCTCCTACTAGGAATACTGACTTTGCTCCTATTAGGAATACCGAC
TTTGGAAACGATATGGTCGGTAAAGGTAGAAGGAAGGGAGGGAAAAAGAAGAATAAAAGTAAGAAAAAGGGTGGCGGTAAGAAACGCCAC
Protein sequenceShow/hide protein sequence
MSWKDKKEIENRKIVSLGGKPQKKQKLPLSVARPIMKKQKEREQKMMEERLNLGQSSGNNSRRSMGKRKPEDQVLRPSEGIFRNGVLDVKHLLHRAPTRNTDFAPIRNTD
FGNDMVGKGRRKGGKKKNKSKKKGGGKKRH