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MS010163 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010163
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING-type domain-containing protein
Genome locationscaffold391:347252..347371
RNA-Seq ExpressionMS010163
SyntenyMS010163
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061770.1 E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis melo var. makuwa]4.9e-0970Show/hide
Query:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
        TCI RW SYTQKPTC QCKHPFEF+I+H SLDG +  ++F
Subjt:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
KAG6570419.1 hypothetical protein SDJN03_29334, partial [Cucurbita argyrosperma subsp. sororia]4.9e-0970Show/hide
Query:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
        TCI RW SYTQKPTC QCKHPFEF+I+H SLDG +  ++F
Subjt:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
XP_022943783.1 uncharacterized protein LOC111448431 [Cucurbita moschata]4.9e-0970Show/hide
Query:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
        TCI RW SYTQKPTC QCKHPFEF+I+H SLDG +  ++F
Subjt:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
XP_022987030.1 uncharacterized protein LOC111484597 [Cucurbita maxima]4.9e-0970Show/hide
Query:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
        TCI RW SYTQKPTC QCKHPFEF+I+H SLDG +  ++F
Subjt:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
XP_023511780.1 uncharacterized protein LOC111776696 [Cucurbita pepo subsp. pepo]4.9e-0970Show/hide
Query:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
        TCI RW SYTQKPTC QCKHPFEF+I+H SLDG +  ++F
Subjt:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
TrEMBL top hitse value%identityAlignment
A0A1S4DXR5 uncharacterized protein LOC1034914762.4e-0970Show/hide
Query:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
        TCI RW SYTQKPTC QCKHPFEF+I+H SLDG +  ++F
Subjt:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
A0A5A7V3C1 E3 ubiquitin-protein ligase RNF13 isoform X22.4e-0970Show/hide
Query:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
        TCI RW SYTQKPTC QCKHPFEF+I+H SLDG +  ++F
Subjt:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
A0A5D3B8D7 E3 ubiquitin-protein ligase RNF13 isoform X22.4e-0970Show/hide
Query:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
        TCI RW SYTQKPTC QCKHPFEF+I+H SLDG +  ++F
Subjt:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
A0A6J1FXD4 uncharacterized protein LOC1114484312.4e-0970Show/hide
Query:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
        TCI RW SYTQKPTC QCKHPFEF+I+H SLDG +  ++F
Subjt:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
A0A6J1JFP2 uncharacterized protein LOC1114845972.4e-0970Show/hide
Query:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
        TCI RW SYTQKPTC QCKHPFEF+I+H SLDG +  ++F
Subjt:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G12310.1 RING/U-box superfamily protein9.0e-0955Show/hide
Query:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
        TCI RW SY +KPTC QCK PF+F+ +H +LDG +   +F
Subjt:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
AT5G19430.1 RING/U-box superfamily protein1.2e-0852.5Show/hide
Query:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
        TCI RW S  + PTC QCKHPF+F+ +H +LDG +   +F
Subjt:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
AT5G19430.2 RING/U-box superfamily protein1.2e-0852.5Show/hide
Query:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF
        TCI RW S  + PTC QCKHPF+F+ +H +LDG +   +F
Subjt:  TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACTTGCATCTTTCGATGGACCTCGTACACTCAGAAACCGACTTGTCTACAATGTAAGCATCCATTTGAGTTCATGATTCTACACCATTCTCTTGATGGAGATATGTGCAC
ACATATTTTC
mRNA sequenceShow/hide mRNA sequence
ACTTGCATCTTTCGATGGACCTCGTACACTCAGAAACCGACTTGTCTACAATGTAAGCATCCATTTGAGTTCATGATTCTACACCATTCTCTTGATGGAGATATGTGCAC
ACATATTTTC
Protein sequenceShow/hide protein sequence
TCIFRWTSYTQKPTCLQCKHPFEFMILHHSLDGDMCTHIF