CuGenDBv2

Gene ID	MS010171
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A1
Genome location	scaffold391:440167..440337
RNA-Seq Expression	MS010171
Synteny	MS010171
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0022900 - electron transport chain (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

ADD30827.1 photosystem I P700 apoprotein A1 [Ximenia americana]

8.9e-20

94.92

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Query:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN
        GGGDL  VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLISDKAN
Subjt:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN

YP_009456061.1 photosystem I P700 chlorophyll a apoprotein A1 [Momordica charantia]

1.5e-19

94.92

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Query:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN
        GGGDL  VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLI DKAN
Subjt:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN

YP_009516503.1 photosystem I P700 chlorophyll a apoprotein A1 [Malania oleifera]

8.9e-20

94.92

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Query:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN
        GGGDL  VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLISDKAN
Subjt:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN

YP_009752920.1 photosystem I P700 apoprotein A1 [Momordica sessilifolia]

1.5e-19

94.92

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Query:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN
        GGGDL  VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLI DKAN
Subjt:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN

YP_009872611.1 photosystem I P700 apoprotein A1 [Dipentodon sinicus]

1.5e-19

94.92

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Query:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN
        GGGDL  VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLI DKAN
Subjt:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN

TrEMBL top hits

e value

%identity

Alignment

A0A1L5YE72 Photosystem I P700 chlorophyll a apoprotein A1

7.3e-20

94.92

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Query:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN
        GGGDL  VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLI DKAN
Subjt:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN

A0A218KG56 Photosystem I P700 chlorophyll a apoprotein A1

7.3e-20

94.92

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Query:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN
        GGGDL  VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLI DKAN
Subjt:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN

A0A386Q084 Photosystem I P700 chlorophyll a apoprotein A1

4.3e-20

94.92

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Query:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN
        GGGDL  VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLISDKAN
Subjt:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN

A0A410HF85 Photosystem I P700 chlorophyll a apoprotein A1

7.3e-20

94.92

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Query:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN
        GGGDL  VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLI DKAN
Subjt:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN

D3WCZ8 Photosystem I P700 chlorophyll a apoprotein A1

4.3e-20

94.92

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Query:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN
        GGGDL  VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLISDKAN
Subjt:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN

SwissProt top hits

e value

%identity

Alignment

Q2QD89 Photosystem I P700 chlorophyll a apoprotein A1

2.0e-22

94.92

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Query:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN
        GGGDL  VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLI DKAN
Subjt:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN

Q70Y03 Photosystem I P700 chlorophyll a apoprotein A1

4.4e-22

93.22

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Query:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN
        GGGDL  VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLI DKAN
Subjt:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN

Q7YJX2 Photosystem I P700 chlorophyll a apoprotein A1

4.4e-22

93.22

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Query:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN
        GGGDL  VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLI DKAN
Subjt:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN

Q8S8X4 Photosystem I P700 chlorophyll a apoprotein A1

4.4e-22

93.22

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Query:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN
        GGGDL  VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLI DKAN
Subjt:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN

Q9MUJ5 Photosystem I P700 chlorophyll a apoprotein A1

4.4e-22

93.22

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Query:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN
        GGGDL  VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLI DKAN
Subjt:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

2.3e-05

51.22

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Query:  IPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDK
        + +G  DFLVHH  A  +H T LIL+KG L +R S+L+ DK
Subjt:  IPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDK

ATCG00350.1 Photosystem I, PsaA/PsaB protein

9.1e-23

91.53

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Query:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN
        GGG+L  VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLI DKAN
Subjt:  GGGDL--VGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN

Sequences

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CDS sequence

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GGGGGTGGTGATTTAGTGGGCGGCAAAGTTGCTTTGTTACCTATTCCATTAGGAACCGCAGATTTTTTGGTACATCATATTCATGCATTTACGATTCATGTGACGGTATT
GATACTCCTGAAAGGTGTTCTATTTTCTCGTAGCTCGCGTTTGATATCGGATAAAGCAAAT

mRNA sequence

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GGGGGTGGTGATTTAGTGGGCGGCAAAGTTGCTTTGTTACCTATTCCATTAGGAACCGCAGATTTTTTGGTACATCATATTCATGCATTTACGATTCATGTGACGGTATT
GATACTCCTGAAAGGTGTTCTATTTTCTCGTAGCTCGCGTTTGATATCGGATAAAGCAAAT

Protein sequence

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GGGDLVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN

MS010171 (gene) of Bitter gourd (TR) v1 genome