; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010190 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010190
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC110412324
Genome locationscaffold391:580506..581440
RNA-Seq ExpressionMS010190
SyntenyMS010190
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449706.1 PREDICTED: uncharacterized protein LOC103491505 [Cucumis melo]7.1e-5272.63Show/hide
Query:  MLSLHSLFNQNQWPLSSPPLSATKKCY-GVLRRRNGHPFPSSAARSCIVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMK-AQDMKLPR
        MLSL S FNQNQ     PP  ATKKC  GVL+ R  HPF  SA+   I+CARE DSQQFE+DPDKARQALQELDQQLQSFSKKQV+ PK K  QDM LPR
Subjt:  MLSLHSLFNQNQWPLSSPPLSATKKCY-GVLRRRNGHPFPSSAARSCIVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMK-AQDMKLPR

Query:  NQIRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLTSSISSERE-EPTEPPVLQQLPLSSEFIPSSPLS
        +Q+RGEM+EI G+LLANSAV LFIFSI YNVLFYTVIKPSIDGPL SSISS+ E E T P VLQQLPLSS  I  S LS
Subjt:  NQIRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLTSSISSERE-EPTEPPVLQQLPLSSEFIPSSPLS

XP_022148727.1 uncharacterized protein LOC111017318 [Momordica charantia]1.8e-8799.43Show/hide
Query:  MLSLHSLFNQNQWPLSSPPLSATKKCYGVLRRRNGHPFPSSAARSCIVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMKAQDMKLPRNQ
        MLSLHSLFNQNQWPLSSPPLSATKKCYGVLRRRNGHPFPSSAARSCIVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMKAQDMKLPRNQ
Subjt:  MLSLHSLFNQNQWPLSSPPLSATKKCYGVLRRRNGHPFPSSAARSCIVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMKAQDMKLPRNQ

Query:  IRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLTSSISSEREEPTEPPVLQQLPLSSEFIPSSPLS
        IRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLTSSISSER EPTEPPVLQQLPLSSEFIPSSPLS
Subjt:  IRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLTSSISSEREEPTEPPVLQQLPLSSEFIPSSPLS

XP_022996085.1 uncharacterized protein LOC111491401 [Cucurbita maxima]1.6e-5170.06Show/hide
Query:  MLSLHSLFNQNQWPLSSPPLSATKKCYGVLRRRNGHPFPSSAARSCIVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMK-AQDMKLPRN
        MLSLHSL NQN      PPL ATKK   VL+ +  HPFPS A+R CIVC++E DSQQFE+DPDKARQALQELDQQLQSFSKK+ TPPK K  +  KLPR+
Subjt:  MLSLHSLFNQNQWPLSSPPLSATKKCYGVLRRRNGHPFPSSAARSCIVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMK-AQDMKLPRN

Query:  QIRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLTSSISSEREEPTEPPVLQQLPLSSEFIPSSPLS
        Q+RGEM+E+S S LANSAV LFIFSI YNVLFY VIKPSID PL SS SSE  + TEPPVLQ LP SS FI  S LS
Subjt:  QIRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLTSSISSEREEPTEPPVLQQLPLSSEFIPSSPLS

XP_023533692.1 uncharacterized protein LOC111795475 [Cucurbita pepo subsp. pepo]4.6e-5169.49Show/hide
Query:  MLSLHSLFNQNQWPLSSPPLSATKKCYGVLRRRNGHPFPSSAARSCIVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMK-AQDMKLPRN
        MLSLHSL NQN      PPL ATKK   VL+ +  HPFPS A+R CIVC++E DSQQFE+DPDKARQALQELDQQLQSFSKK+ TPPK K  +  KLPR+
Subjt:  MLSLHSLFNQNQWPLSSPPLSATKKCYGVLRRRNGHPFPSSAARSCIVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMK-AQDMKLPRN

Query:  QIRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLTSSISSEREEPTEPPVLQQLPLSSEFIPSSPLS
        Q+RGEM+E+S S LANSAV LFIFSI YNVLFY VIKPSID PL S ISSE +  TEPPVLQ LP SS FI  S L+
Subjt:  QIRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLTSSISSEREEPTEPPVLQQLPLSSEFIPSSPLS

XP_038901592.1 uncharacterized protein LOC120088397 [Benincasa hispida]3.5e-5977.53Show/hide
Query:  MLSLHSLFNQNQWPLSSPPLSATKKCY-GVLRRRNGHPFPSSAARSCIVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMKAQDMKLPRN
        MLSL SLFNQNQ     PPL ATKKC   VLRRRN HP   SA+R CI+CARE DSQQFE+DPDKARQALQELDQQL+SFSKKQVT PK K QDMKLPR+
Subjt:  MLSLHSLFNQNQWPLSSPPLSATKKCY-GVLRRRNGHPFPSSAARSCIVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMKAQDMKLPRN

Query:  QIRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLTSSISSERE-EPTEPPVLQQLPLSSEFIPSSPLS
        Q+RGEM+EI+G++LANSAV LFIFSI YNVLFYTVIKPSIDGPL SSISS+ E E TEPPVLQQLPLSS FI  S LS
Subjt:  QIRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLTSSISSERE-EPTEPPVLQQLPLSSEFIPSSPLS

TrEMBL top hitse value%identityAlignment
A0A0A0KH36 Uncharacterized protein8.0e-4969.83Show/hide
Query:  MLSLHSLFNQNQWPLSSPPLSATKKCY-GVLRRRNGHPFPSSAARSCIVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMK-AQDMKLPR
        MLSL SLFNQN      PP   TKKC  GVL+ R  HP   SA+   I+CA+E DSQQFE+DPDKARQALQELDQQLQSFSKKQV+ PK K  QDM +PR
Subjt:  MLSLHSLFNQNQWPLSSPPLSATKKCY-GVLRRRNGHPFPSSAARSCIVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMK-AQDMKLPR

Query:  NQIRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLTSSISSERE-EPTEPPVLQQLPLSSEFIPSSPLS
        +Q+RGEM+EIS +LLANSAV LFIFSI YNVLFYTVIKPSID PL SSISS+ E E T+P VLQQLPLSS  I  S LS
Subjt:  NQIRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLTSSISSERE-EPTEPPVLQQLPLSSEFIPSSPLS

A0A1S3BNA1 uncharacterized protein LOC1034915053.5e-5272.63Show/hide
Query:  MLSLHSLFNQNQWPLSSPPLSATKKCY-GVLRRRNGHPFPSSAARSCIVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMK-AQDMKLPR
        MLSL S FNQNQ     PP  ATKKC  GVL+ R  HPF  SA+   I+CARE DSQQFE+DPDKARQALQELDQQLQSFSKKQV+ PK K  QDM LPR
Subjt:  MLSLHSLFNQNQWPLSSPPLSATKKCY-GVLRRRNGHPFPSSAARSCIVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMK-AQDMKLPR

Query:  NQIRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLTSSISSERE-EPTEPPVLQQLPLSSEFIPSSPLS
        +Q+RGEM+EI G+LLANSAV LFIFSI YNVLFYTVIKPSIDGPL SSISS+ E E T P VLQQLPLSS  I  S LS
Subjt:  NQIRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLTSSISSERE-EPTEPPVLQQLPLSSEFIPSSPLS

A0A5D3BB07 Uncharacterized protein3.5e-5272.63Show/hide
Query:  MLSLHSLFNQNQWPLSSPPLSATKKCY-GVLRRRNGHPFPSSAARSCIVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMK-AQDMKLPR
        MLSL S FNQNQ     PP  ATKKC  GVL+ R  HPF  SA+   I+CARE DSQQFE+DPDKARQALQELDQQLQSFSKKQV+ PK K  QDM LPR
Subjt:  MLSLHSLFNQNQWPLSSPPLSATKKCY-GVLRRRNGHPFPSSAARSCIVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMK-AQDMKLPR

Query:  NQIRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLTSSISSERE-EPTEPPVLQQLPLSSEFIPSSPLS
        +Q+RGEM+EI G+LLANSAV LFIFSI YNVLFYTVIKPSIDGPL SSISS+ E E T P VLQQLPLSS  I  S LS
Subjt:  NQIRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLTSSISSERE-EPTEPPVLQQLPLSSEFIPSSPLS

A0A6J1D5V3 uncharacterized protein LOC1110173188.7e-8899.43Show/hide
Query:  MLSLHSLFNQNQWPLSSPPLSATKKCYGVLRRRNGHPFPSSAARSCIVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMKAQDMKLPRNQ
        MLSLHSLFNQNQWPLSSPPLSATKKCYGVLRRRNGHPFPSSAARSCIVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMKAQDMKLPRNQ
Subjt:  MLSLHSLFNQNQWPLSSPPLSATKKCYGVLRRRNGHPFPSSAARSCIVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMKAQDMKLPRNQ

Query:  IRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLTSSISSEREEPTEPPVLQQLPLSSEFIPSSPLS
        IRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLTSSISSER EPTEPPVLQQLPLSSEFIPSSPLS
Subjt:  IRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLTSSISSEREEPTEPPVLQQLPLSSEFIPSSPLS

A0A6J1K5Q9 uncharacterized protein LOC1114914017.7e-5270.06Show/hide
Query:  MLSLHSLFNQNQWPLSSPPLSATKKCYGVLRRRNGHPFPSSAARSCIVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMK-AQDMKLPRN
        MLSLHSL NQN      PPL ATKK   VL+ +  HPFPS A+R CIVC++E DSQQFE+DPDKARQALQELDQQLQSFSKK+ TPPK K  +  KLPR+
Subjt:  MLSLHSLFNQNQWPLSSPPLSATKKCYGVLRRRNGHPFPSSAARSCIVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMK-AQDMKLPRN

Query:  QIRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLTSSISSEREEPTEPPVLQQLPLSSEFIPSSPLS
        Q+RGEM+E+S S LANSAV LFIFSI YNVLFY VIKPSID PL SS SSE  + TEPPVLQ LP SS FI  S LS
Subjt:  QIRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLTSSISSEREEPTEPPVLQQLPLSSEFIPSSPLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01870.1 unknown protein2.9e-1139.84Show/hide
Query:  IVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMKAQDMKLPRNQ--IRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLT
        IV A ER+   F++D DKAR+AL++LDQQ++S + ++       + D+    N   +  E  EISGS L +SA  L   ++ YN+LF TVIKPS+DGP  
Subjt:  IVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMKAQDMKLPRNQ--IRGEMSEISGSLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLT

Query:  SSISSEREEPTEPPVLQQLPLSS
         S+  E         + + PLSS
Subjt:  SSISSEREEPTEPPVLQQLPLSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTCTCTTCACTCTCTCTTCAATCAGAACCAGTGGCCACTCTCATCTCCGCCATTGTCAGCCACCAAGAAATGCTATGGTGTTTTGAGGAGAAGGAATGGTCACCC
ATTTCCTTCTTCTGCTGCTCGCAGTTGCATTGTGTGTGCAAGGGAGAGAGATTCACAGCAATTTGAGATGGACCCAGATAAGGCCAGGCAAGCCCTTCAAGAGCTTGATC
AGCAGCTTCAATCTTTCTCCAAAAAACAAGTCACTCCTCCCAAGATGAAAGCTCAGGACATGAAGCTTCCAAGAAATCAAATCAGAGGAGAAATGTCAGAGATTTCAGGA
TCCCTTTTAGCAAATTCAGCTGTTTTTCTCTTCATCTTCTCCATTCTCTACAATGTGCTGTTTTATACAGTCATAAAGCCTTCCATTGATGGTCCACTAACAAGTTCTAT
CAGTTCTGAGAGAGAAGAACCCACTGAGCCACCAGTTTTGCAGCAGCTTCCACTTTCATCTGAGTTCATACCCTCTTCACCTCTTAGC
mRNA sequenceShow/hide mRNA sequence
ATGCTTTCTCTTCACTCTCTCTTCAATCAGAACCAGTGGCCACTCTCATCTCCGCCATTGTCAGCCACCAAGAAATGCTATGGTGTTTTGAGGAGAAGGAATGGTCACCC
ATTTCCTTCTTCTGCTGCTCGCAGTTGCATTGTGTGTGCAAGGGAGAGAGATTCACAGCAATTTGAGATGGACCCAGATAAGGCCAGGCAAGCCCTTCAAGAGCTTGATC
AGCAGCTTCAATCTTTCTCCAAAAAACAAGTCACTCCTCCCAAGATGAAAGCTCAGGACATGAAGCTTCCAAGAAATCAAATCAGAGGAGAAATGTCAGAGATTTCAGGA
TCCCTTTTAGCAAATTCAGCTGTTTTTCTCTTCATCTTCTCCATTCTCTACAATGTGCTGTTTTATACAGTCATAAAGCCTTCCATTGATGGTCCACTAACAAGTTCTAT
CAGTTCTGAGAGAGAAGAACCCACTGAGCCACCAGTTTTGCAGCAGCTTCCACTTTCATCTGAGTTCATACCCTCTTCACCTCTTAGC
Protein sequenceShow/hide protein sequence
MLSLHSLFNQNQWPLSSPPLSATKKCYGVLRRRNGHPFPSSAARSCIVCARERDSQQFEMDPDKARQALQELDQQLQSFSKKQVTPPKMKAQDMKLPRNQIRGEMSEISG
SLLANSAVFLFIFSILYNVLFYTVIKPSIDGPLTSSISSEREEPTEPPVLQQLPLSSEFIPSSPLS