; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010191 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010191
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationscaffold391:582502..585225
RNA-Seq ExpressionMS010191
SyntenyMS010191
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570399.1 Nuclear transcription factor Y subunit A-1, partial [Cucurbita argyrosperma subsp. sororia]1.4e-16087.79Show/hide
Query:  MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAV
        M SK +SVNQLESEPPNMQQT SYSEPWWRSIGYN IS PAAGGN+SNSTSLEC NGASESNDG SMSNDDLNE+DDDD TKDS+A SYGQ Q+N+Q AV
Subjt:  MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAV

Query:  STAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
        S APTVHGGCITQPPQLELVGH+IACASN YQDPYY G+M AYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
Subjt:  STAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK

Query:  VRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ
        +RKPYLHESRHQHAMRRARGSGGRFAKK+EVNSS STMK+K+ GSGQA SSHSA SSGSEA P  LAETWNSSNGQQEARTQLHE YEAR+YVNGS  F 
Subjt:  VRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ

Query:  NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK
        NYSSFQASSYALR+GERG+DGDCSGQQRGSISENQAAQRRLAIK
Subjt:  NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK

KAG7010273.1 Nuclear transcription factor Y subunit A-1 [Cucurbita argyrosperma subsp. argyrosperma]2.2e-16188.08Show/hide
Query:  MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAV
        M SK +SVNQLESEPPNMQQT SYSEPWWRSIGYN ISPPAAGGN+SNSTSLEC NGASESNDG SMSNDDLNE+DDDD TKDS A SYGQ Q+N+Q AV
Subjt:  MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAV

Query:  STAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
        S APTVHGGCITQPPQLELVGH+IACASN YQDPYY G+M AYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
Subjt:  STAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK

Query:  VRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ
        +RKPYLHESRHQHAMRRARGSGGRFAKK+EVNSS STMK+K+ GSGQA SSHSA SSGSEA P  LAETWNSSNGQQEARTQLHE YEAR+YVNGS  F 
Subjt:  VRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ

Query:  NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK
        NYSSFQASSYALR+GERG+DGDCSGQQRGSISENQAAQRRLAIK
Subjt:  NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK

XP_022148721.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia]1.8e-18799.71Show/hide
Query:  MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAV
        MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESN+GQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAV
Subjt:  MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAV

Query:  STAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
        STAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
Subjt:  STAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK

Query:  VRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ
        VRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ
Subjt:  VRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ

Query:  NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK
        NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK
Subjt:  NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK

XP_022944164.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita moschata]1.7e-16188.05Show/hide
Query:  HSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVS
        HSK +SVNQLESEPPNMQQT SYSEPWWRSIGYN ISPPAAGGN+SNSTSLEC NGASESNDG SMSNDDLNE+DDDD TKDS A SYGQ Q+N+Q AVS
Subjt:  HSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVS

Query:  TAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
         APTVHGGCITQPPQLELVGH+IACASN YQDPYY G+M AYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK+
Subjt:  TAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV

Query:  RKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQN
        RKPYLHESRHQHAMRRARGSGGRFAKK+EVNSS STMK+K+ GSGQA SSHSA SSGSEA P  LAETWNSSNGQQEARTQLHE Y+AR+YVNGS  F N
Subjt:  RKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQN

Query:  YSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK
        YSSFQASSYALR+GERG+DGDCSGQQRGSISENQAAQRRLAIK
Subjt:  YSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK

XP_022944166.1 nuclear transcription factor Y subunit A-1-like isoform X3 [Cucurbita moschata]4.8e-16187.79Show/hide
Query:  MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAV
        M SK +SVNQLESEPPNMQQT SYSEPWWRSIGYN ISPPAAGGN+SNSTSLEC NGASESNDG SMSNDDLNE+DDDD TKDS A SYGQ Q+N+Q AV
Subjt:  MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAV

Query:  STAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
        S APTVHGGCITQPPQLELVGH+IACASN YQDPYY G+M AYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
Subjt:  STAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK

Query:  VRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ
        +RKPYLHESRHQHAMRRARGSGGRFAKK+EVNSS STMK+K+ GSGQA SSHSA SSGSEA P  LAETWNSSNGQQEARTQLHE Y+AR+YVNGS  F 
Subjt:  VRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ

Query:  NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK
        NYSSFQASSYALR+GERG+DGDCSGQQRGSISENQAAQRRLAIK
Subjt:  NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK

TrEMBL top hitse value%identityAlignment
A0A0A0KEL9 Nuclear transcription factor Y subunit4.8e-15988.08Show/hide
Query:  MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAV
        M SKSKSVNQLESEPPNMQQT S+SEPWWRSIGYN ISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDD+ TKDS  AS+GQ QHN Q AV
Subjt:  MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAV

Query:  STAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
        S AP VH GCITQPPQLELVGH+IACASNPYQDPYY G+M AYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
Subjt:  STAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK

Query:  VRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ
        VRKPYLHESRHQHAMRRARGSGGRFAKK+E NS  STMKDK+ GSGQAISSHSA SSGS+A P  LAETWNSSNGQQE+RTQLHE YEAR+Y+NGSS F 
Subjt:  VRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ

Query:  NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK
        NYSSFQASSY LR+GERG+DGDCSGQQR SISENQAAQRRLAIK
Subjt:  NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK

A0A6J1D691 Nuclear transcription factor Y subunit8.5e-18899.71Show/hide
Query:  MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAV
        MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESN+GQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAV
Subjt:  MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAV

Query:  STAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
        STAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
Subjt:  STAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK

Query:  VRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ
        VRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ
Subjt:  VRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ

Query:  NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK
        NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK
Subjt:  NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK

A0A6J1FTP1 Nuclear transcription factor Y subunit2.3e-16187.79Show/hide
Query:  MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAV
        M SK +SVNQLESEPPNMQQT SYSEPWWRSIGYN ISPPAAGGN+SNSTSLEC NGASESNDG SMSNDDLNE+DDDD TKDS A SYGQ Q+N+Q AV
Subjt:  MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAV

Query:  STAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
        S APTVHGGCITQPPQLELVGH+IACASN YQDPYY G+M AYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
Subjt:  STAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK

Query:  VRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ
        +RKPYLHESRHQHAMRRARGSGGRFAKK+EVNSS STMK+K+ GSGQA SSHSA SSGSEA P  LAETWNSSNGQQEARTQLHE Y+AR+YVNGS  F 
Subjt:  VRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ

Query:  NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK
        NYSSFQASSYALR+GERG+DGDCSGQQRGSISENQAAQRRLAIK
Subjt:  NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK

A0A6J1FW74 Nuclear transcription factor Y subunit8.0e-16288.05Show/hide
Query:  HSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVS
        HSK +SVNQLESEPPNMQQT SYSEPWWRSIGYN ISPPAAGGN+SNSTSLEC NGASESNDG SMSNDDLNE+DDDD TKDS A SYGQ Q+N+Q AVS
Subjt:  HSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVS

Query:  TAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
         APTVHGGCITQPPQLELVGH+IACASN YQDPYY G+M AYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK+
Subjt:  TAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV

Query:  RKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQN
        RKPYLHESRHQHAMRRARGSGGRFAKK+EVNSS STMK+K+ GSGQA SSHSA SSGSEA P  LAETWNSSNGQQEARTQLHE Y+AR+YVNGS  F N
Subjt:  RKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQN

Query:  YSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK
        YSSFQASSYALR+GERG+DGDCSGQQRGSISENQAAQRRLAIK
Subjt:  YSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK

A0A6J1JHB5 Nuclear transcription factor Y subunit4.4e-16087.5Show/hide
Query:  MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAV
        M SK +SVNQLESEPPNMQQT SYSEPWWRSIGYN IS PAAGGN+SNSTSLEC NGASESNDG SMSNDDLNE+DDDD TKDS A SYGQ Q+N Q AV
Subjt:  MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAV

Query:  STAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
        S APTVHGGCITQPPQLELVGH+IACASN YQDPYY G+M AYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
Subjt:  STAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK

Query:  VRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ
        +RKPYLHESRHQHAMRRARGSGGRFAKK+EVNSS ST+K+K+ GSGQA SSHSA SSGSEA P  LAETWNSSNGQQEARTQLHE YEAR+YVNGS  F 
Subjt:  VRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ

Query:  NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK
        NYSSFQASSYALR+GERG+DGDCSGQQRGSISENQAAQRRLAIK
Subjt:  NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-74.5e-2146.81Show/hide
Query:  HNIACASNPYQDPYYPGLMTAYGHQPLG-YPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARG
        +++A    PY DPYY  +         G +   +G+    + LP +  +EPVFVNAKQY GILRRRQ+RA+ E +NK+IK RKPYLHESRH HA+RR RG
Subjt:  HNIACASNPYQDPYYPGLMTAYGHQPLG-YPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARG

Query:  SGGRF--AKKSEVNSSCSTMKDKECGSGQAISSHSASSSGS
         GGRF  AKK + +   S+ ++K   +  A  S  A+SSG+
Subjt:  SGGRF--AKKSEVNSSCSTMKDKECGSGQAISSHSASSSGS

Q8VY64 Nuclear transcription factor Y subunit A-41.2e-2143.05Show/hide
Query:  PYQDPYYPGLMTAYGHQPLGYP----PFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF
        PY DPYY  +     + P  YP      +GM    + L  +  +EPVFVNAKQY GILRRRQ+RAK E  N+ IK +KPY+HESRH HA+RR RG GGRF
Subjt:  PYQDPYYPGLMTAYGHQPLGYP----PFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF

Query:  AKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQ
            + N      K++E    +A S  + S + S      LA   +  NG+
Subjt:  AKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQ

Q93ZH2 Nuclear transcription factor Y subunit A-31.9e-1939.02Show/hide
Query:  ESNDGQSMSNDDLNEEDDDDNTKDSQAASY----GQEQHNTQRAVSTAP------TVHGGCITQPPQLELVGH-NIACA------SNPYQDPYYPGLMTA
        +S  G   +   ++ +D D ++  S   SY         N  R +S +       T   G  + P Q  + G  NI  A      S  Y DP+Y GL+ A
Subjt:  ESNDGQSMSNDDLNEEDDDDNTKDSQAASY----GQEQHNTQRAVSTAP------TVHGGCITQPPQLELVGH-NIACA------SNPYQDPYYPGLMTA

Query:  --YGHQPLGYPPFLGMPHARMALPLEVTQ-EPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF--AKKSEVNSSCST
              P   P  + M   R+ LP E+T+ +PVFVNAKQY  I+RRRQ RAK E +NKLI+ RKPYLHESRH HA++R RGSGGRF   KK    S  + 
Subjt:  --YGHQPLGYPPFLGMPHARMALPLEVTQ-EPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF--AKKSEVNSSCST

Query:  MKDKE
         +++E
Subjt:  MKDKE

Q945M9 Nuclear transcription factor Y subunit A-95.5e-5144.54Show/hide
Query:  MHSKSKS-VNQLESEPPNMQQTGSYS-EPWWR-SIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQ
        MHSKS S  N+++SE      +   S  PW R +   N  S   AG   S S +L     A ESN  +S SN D     +   T   Q+A    +++   
Subjt:  MHSKSKS-VNQLESEPPNMQQTGSYS-EPWWR-SIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQ

Query:  RAVSTAPTVHGGCITQPPQLELVGHNIACA-SNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVEN
               ++H G    PP  +LVGH +  A SNPYQDPYY G+M AYGH PLG+ P+ GMPH+RM LP E+ QEPVFVNAKQYQ ILRRRQARAKAE+E 
Subjt:  RAVSTAPTVHGGCITQPPQLELVGHNIACA-SNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVEN

Query:  KLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGS
        KLIK RKPYLHESRHQHAMRR RG+GGRFAKK+  N+  S  K +E  +G    S S+S+S          E W                       NG 
Subjt:  KLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGS

Query:  SHFQNYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK
                 Q+S+Y     +R E+G+CSGQQ  S+S N  +Q RLAIK
Subjt:  SHFQNYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK

Q9LXV5 Nuclear transcription factor Y subunit A-13.0e-5751.96Show/hide
Query:  KSKSVNQLESEPPN---MQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAA-------SYGQEQ
        +SK   + E E  N   +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D   KDSQAA       ++G E 
Subjt:  KSKSVNQLESEPPN---MQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAA-------SYGQEQ

Query:  HNTQRAVSTAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAE
        ++   ++     +H   + QPP  ELVGH IAC  NPYQDPYY GLM AYGHQ LG+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE
Subjt:  HNTQRAVSTAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAE

Query:  VENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNS-SCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSS
        +E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKKSEV +   +  +D+E GS       + +SSGSE V     ET NSS
Subjt:  VENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNS-SCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSS

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A93.9e-5244.54Show/hide
Query:  MHSKSKS-VNQLESEPPNMQQTGSYS-EPWWR-SIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQ
        MHSKS S  N+++SE      +   S  PW R +   N  S   AG   S S +L     A ESN  +S SN D     +   T   Q+A    +++   
Subjt:  MHSKSKS-VNQLESEPPNMQQTGSYS-EPWWR-SIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQ

Query:  RAVSTAPTVHGGCITQPPQLELVGHNIACA-SNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVEN
               ++H G    PP  +LVGH +  A SNPYQDPYY G+M AYGH PLG+ P+ GMPH+RM LP E+ QEPVFVNAKQYQ ILRRRQARAKAE+E 
Subjt:  RAVSTAPTVHGGCITQPPQLELVGHNIACA-SNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVEN

Query:  KLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGS
        KLIK RKPYLHESRHQHAMRR RG+GGRFAKK+  N+  S  K +E  +G    S S+S+S          E W                       NG 
Subjt:  KLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGS

Query:  SHFQNYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK
                 Q+S+Y     +R E+G+CSGQQ  S+S N  +Q RLAIK
Subjt:  SHFQNYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK

AT5G12840.1 nuclear factor Y, subunit A12.1e-5851.96Show/hide
Query:  KSKSVNQLESEPPN---MQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAA-------SYGQEQ
        +SK   + E E  N   +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D   KDSQAA       ++G E 
Subjt:  KSKSVNQLESEPPN---MQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAA-------SYGQEQ

Query:  HNTQRAVSTAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAE
        ++   ++     +H   + QPP  ELVGH IAC  NPYQDPYY GLM AYGHQ LG+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE
Subjt:  HNTQRAVSTAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAE

Query:  VENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNS-SCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSS
        +E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKKSEV +   +  +D+E GS       + +SSGSE V     ET NSS
Subjt:  VENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNS-SCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSS

AT5G12840.2 nuclear factor Y, subunit A17.4e-5952.35Show/hide
Query:  KSKSVNQLESEPPN---MQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAV
        +SK   + E E  N   +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D   KDSQAA+  +  ++     
Subjt:  KSKSVNQLESEPPN---MQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAV

Query:  STAPTV---HGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENK
          A ++   H   + QPP  ELVGH IAC  NPYQDPYY GLM AYGHQ LG+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E K
Subjt:  STAPTV---HGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENK

Query:  LIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNS-SCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSS
        +I+ RKPYLHESRH+HAMRRAR SGGRFAKKSEV +   +  +D+E GS       + +SSGSE V     ET NSS
Subjt:  LIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNS-SCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSS

AT5G12840.3 nuclear factor Y, subunit A12.1e-5851.96Show/hide
Query:  KSKSVNQLESEPPN---MQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAA-------SYGQEQ
        +SK   + E E  N   +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D   KDSQAA       ++G E 
Subjt:  KSKSVNQLESEPPN---MQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAA-------SYGQEQ

Query:  HNTQRAVSTAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAE
        ++   ++     +H   + QPP  ELVGH IAC  NPYQDPYY GLM AYGHQ LG+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE
Subjt:  HNTQRAVSTAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAE

Query:  VENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNS-SCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSS
        +E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKKSEV +   +  +D+E GS       + +SSGSE V     ET NSS
Subjt:  VENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNS-SCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSS

AT5G12840.4 nuclear factor Y, subunit A17.4e-5952.35Show/hide
Query:  KSKSVNQLESEPPN---MQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAV
        +SK   + E E  N   +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D   KDSQAA+  +  ++     
Subjt:  KSKSVNQLESEPPN---MQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAV

Query:  STAPTV---HGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENK
          A ++   H   + QPP  ELVGH IAC  NPYQDPYY GLM AYGHQ LG+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E K
Subjt:  STAPTV---HGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENK

Query:  LIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNS-SCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSS
        +I+ RKPYLHESRH+HAMRRAR SGGRFAKKSEV +   +  +D+E GS       + +SSGSE V     ET NSS
Subjt:  LIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNS-SCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTCAAAATCTAAAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCAGACTGGTAGTTATTCTGAACCTTGGTGGCGCAGTATTGGGTACAATCCTAT
CTCCCCGCCAGCAGCAGGAGGAAATGTGTCCAATTCAACATCACTGGAATGCACTAATGGTGCTTCCGAATCTAATGATGGTCAGTCGATGTCAAATGATGATTTGAATG
AAGAAGACGATGATGATAACACAAAAGACTCACAAGCTGCAAGTTATGGGCAAGAACAGCACAACACCCAGCGTGCTGTTTCAACTGCACCTACAGTGCATGGTGGATGT
ATCACACAACCTCCTCAGCTGGAACTTGTAGGCCACAATATAGCGTGTGCATCAAATCCATATCAAGATCCTTATTATCCAGGACTGATGACTGCCTATGGGCATCAACC
TTTGGGTTATCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCTTTGCCCCTTGAGGTGACACAGGAGCCAGTTTTTGTGAATGCCAAACAATACCAAGGGATTCTAA
GGCGAAGACAAGCACGTGCTAAAGCAGAGGTCGAGAATAAACTGATAAAAGTTAGAAAGCCATATCTTCATGAGTCTCGTCACCAGCATGCCATGAGAAGGGCAAGGGGT
AGTGGAGGACGTTTTGCCAAGAAGAGTGAAGTTAATTCTTCGTGCTCTACTATGAAGGATAAGGAATGTGGATCTGGTCAAGCTATCTCATCGCACTCAGCTAGTTCATC
TGGTTCTGAAGCTGTGCCTCGTGTCTTGGCTGAAACCTGGAATTCCTCCAATGGTCAACAAGAAGCAAGGACGCAGTTGCATGAGACATATGAAGCTCGTACTTATGTAA
ATGGCAGTAGCCATTTTCAAAACTACAGTAGCTTCCAAGCTTCATCATATGCTTTACGTACTGGCGAGAGAGGTGAAGATGGAGACTGTTCGGGACAGCAACGAGGAAGT
ATCTCAGAAAATCAGGCGGCACAGAGGCGTCTTGCCATTAAG
mRNA sequenceShow/hide mRNA sequence
ATGCATTCAAAATCTAAAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCAGACTGGTAGTTATTCTGAACCTTGGTGGCGCAGTATTGGGTACAATCCTAT
CTCCCCGCCAGCAGCAGGAGGAAATGTGTCCAATTCAACATCACTGGAATGCACTAATGGTGCTTCCGAATCTAATGATGGTCAGTCGATGTCAAATGATGATTTGAATG
AAGAAGACGATGATGATAACACAAAAGACTCACAAGCTGCAAGTTATGGGCAAGAACAGCACAACACCCAGCGTGCTGTTTCAACTGCACCTACAGTGCATGGTGGATGT
ATCACACAACCTCCTCAGCTGGAACTTGTAGGCCACAATATAGCGTGTGCATCAAATCCATATCAAGATCCTTATTATCCAGGACTGATGACTGCCTATGGGCATCAACC
TTTGGGTTATCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCTTTGCCCCTTGAGGTGACACAGGAGCCAGTTTTTGTGAATGCCAAACAATACCAAGGGATTCTAA
GGCGAAGACAAGCACGTGCTAAAGCAGAGGTCGAGAATAAACTGATAAAAGTTAGAAAGCCATATCTTCATGAGTCTCGTCACCAGCATGCCATGAGAAGGGCAAGGGGT
AGTGGAGGACGTTTTGCCAAGAAGAGTGAAGTTAATTCTTCGTGCTCTACTATGAAGGATAAGGAATGTGGATCTGGTCAAGCTATCTCATCGCACTCAGCTAGTTCATC
TGGTTCTGAAGCTGTGCCTCGTGTCTTGGCTGAAACCTGGAATTCCTCCAATGGTCAACAAGAAGCAAGGACGCAGTTGCATGAGACATATGAAGCTCGTACTTATGTAA
ATGGCAGTAGCCATTTTCAAAACTACAGTAGCTTCCAAGCTTCATCATATGCTTTACGTACTGGCGAGAGAGGTGAAGATGGAGACTGTTCGGGACAGCAACGAGGAAGT
ATCTCAGAAAATCAGGCGGCACAGAGGCGTCTTGCCATTAAG
Protein sequenceShow/hide protein sequence
MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTVHGGC
ITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARG
SGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQNYSSFQASSYALRTGERGEDGDCSGQQRGS
ISENQAAQRRLAIK