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MS010193 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010193
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransmembrane protein
Genome locationscaffold391:595295..595468
RNA-Seq ExpressionMS010193
SyntenyMS010193
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD5323680.1 unnamed protein product [Arabidopsis thaliana]2.5e-0666.67Show/hide
Query:  AKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPP
        A  KKSS SGGAKK I  RR  Q    LCFFGAGGHV+ISGIL+  A GV QPP
Subjt:  AKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPP

GFY96234.1 hypothetical protein Acr_11g0005400 [Actinidia rufa]3.1e-0459.65Show/hide
Query:  MSGSAKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQP
        MS +A KKKSS SGG K AIG+ R E     L FFG  GH  ISG LNL A GV QP
Subjt:  MSGSAKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQP

QHO18661.1 uncharacterized protein DS421_11g322430 [Arachis hypogaea]3.0e-0767.27Show/hide
Query:  KKKSSNSGGAKKAIGDRRKEQ---SETGLCFFGAGGHVTISGILNLSALGVLQPP
        KKK S SGG K   GDRRKEQ    E  LCFFGAGGHV ISGILN S  GV Q P
Subjt:  KKKSSNSGGAKKAIGDRRKEQ---SETGLCFFGAGGHVTISGILNLSALGVLQPP

QHO48225.1 uncharacterized protein DS421_1g03730 [Arachis hypogaea]2.0e-0665.45Show/hide
Query:  KKKSSNSGGAKKAIGDRRKEQ---SETGLCFFGAGGHVTISGILNLSALGVLQPP
        KKK S SGG K   GD RKEQ    E  LCFFGAGGHV ISGILN S  GV Q P
Subjt:  KKKSSNSGGAKKAIGDRRKEQ---SETGLCFFGAGGHVTISGILNLSALGVLQPP

XP_016900741.1 PREDICTED: uncharacterized protein LOC107991009 [Cucumis melo]5.7e-1482.46Show/hide
Query:  SGSAKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPP
        +G A KKKSSNSGGAKKA+GDRR EQSET L FFGAGGHV ISGIL LSA GVLQPP
Subjt:  SGSAKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPP

TrEMBL top hitse value%identityAlignment
A0A1S4DXN3 uncharacterized protein LOC1079910092.7e-1482.46Show/hide
Query:  SGSAKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPP
        +G A KKKSSNSGGAKKA+GDRR EQSET L FFGAGGHV ISGIL LSA GVLQPP
Subjt:  SGSAKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPP

A0A5D3BCF0 Transmembrane protein2.7e-1482.46Show/hide
Query:  SGSAKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPP
        +G A KKKSSNSGGAKKA+GDRR EQSET L FFGAGGHV ISGIL LSA GVLQPP
Subjt:  SGSAKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPP

A0A7G2EN36 (thale cress) hypothetical protein1.2e-0666.67Show/hide
Query:  AKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPP
        A  KKSS SGGAKK I  RR  Q    LCFFGAGGHV+ISGIL+  A GV QPP
Subjt:  AKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPP

A0A7J0FBZ7 Uncharacterized protein1.5e-0459.65Show/hide
Query:  MSGSAKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQP
        MS +A KKKSS SGG K AIG+ R E     L FFG  GH  ISG LNL A GV QP
Subjt:  MSGSAKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQP

D7KZY0 Uncharacterized protein2.6e-0465.12Show/hide
Query:  AKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPP
        AKK I  RR  Q    LCFFGAGGHV+ISGIL+  A GV QPP
Subjt:  AKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G20900.1 unknown protein1.4e-0756.9Show/hide
Query:  MSGSAKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPP
        M+  A+K K+S    AKK I  RR  Q    LCFFGAGGHV+ISGIL+  A GV QPP
Subjt:  MSGSAKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGGCAGCGCGAAGAAGAAGAAGAGCTCTAATTCCGGAGGGGCAAAAAAGGCAATTGGCGATCGCCGGAAAGAGCAATCGGAAACGGGTCTTTGCTTCTTCGGCGC
CGGCGGGCATGTTACAATCTCCGGAATTCTGAATCTCTCTGCTCTCGGCGTGCTGCAGCCGCCG
mRNA sequenceShow/hide mRNA sequence
ATGTCCGGCAGCGCGAAGAAGAAGAAGAGCTCTAATTCCGGAGGGGCAAAAAAGGCAATTGGCGATCGCCGGAAAGAGCAATCGGAAACGGGTCTTTGCTTCTTCGGCGC
CGGCGGGCATGTTACAATCTCCGGAATTCTGAATCTCTCTGCTCTCGGCGTGCTGCAGCCGCCG
Protein sequenceShow/hide protein sequence
MSGSAKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPP