; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010194 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010194
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionheterogeneous nuclear ribonucleoprotein F
Genome locationscaffold391:597672..598448
RNA-Seq ExpressionMS010194
SyntenyMS010194
Gene Ontology termsGO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041416.1 heterogeneous nuclear ribonucleoprotein H isoform X1 [Cucumis melo var. makuwa]1.7e-13493.75Show/hide
Query:  HSSYVDGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVTQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGY
        H SY DGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYV QPPPFPVVRLRGLPFDCMETDV EFFHGLDIVDI+FVHKNGKFTGEGFCVLGY
Subjt:  HSSYVDGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVTQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGY

Query:  PLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHL
        PLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKA+ANEVFDARGGSPRR+AP  SK N+EVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSED IHL
Subjt:  PLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHL

Query:  TLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR
        TLNSEGRPSGEAFVEF+N QDSKAAM+KDRMTLGSRYIELFPSS EELDEAISRGR
Subjt:  TLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR

TYJ96136.1 heterogeneous nuclear ribonucleoprotein H isoform X1 [Cucumis melo var. makuwa]1.7e-13493.75Show/hide
Query:  HSSYVDGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVTQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGY
        H SY DGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYV QPPPFPVVRLRGLPFDCMETDV EFFHGLDIVDI+FVHKNGKFTGEGFCVLGY
Subjt:  HSSYVDGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVTQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGY

Query:  PLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHL
        PLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKA+ANEVFDARGGSPRR+AP  SK N+EVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSED IHL
Subjt:  PLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHL

Query:  TLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR
        TLNSEGRPSGEAFVEF+N QDSKAAM+KDRMTLGSRYIELFPSS EELDEAISRGR
Subjt:  TLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR

XP_004142112.1 heterogeneous nuclear ribonucleoprotein F [Cucumis sativus]2.9e-13493.02Show/hide
Query:  FDHSSYVDGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVTQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVL
        F   SY DGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYV QPPPFPVVRLRGLPFDCMETDV EFFHGLDIVDI+FVHKNGKFTGEGFCVL
Subjt:  FDHSSYVDGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVTQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVL

Query:  GYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLI
        GYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKA+ANEVFDARGGSPRR+AP  SK N+EVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSED I
Subjt:  GYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLI

Query:  HLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR
        HLTLNSEGRPSGEAFVEF+N QDSKAAM+KDRMTLGSRYIELFPSS EELDEAISRGR
Subjt:  HLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR

XP_022148687.1 heterogeneous nuclear ribonucleoprotein F [Momordica charantia]1.5e-14398.06Show/hide
Query:  FDHSSYVDGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVTQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVL
        F   SYVDGG+GREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYV+QPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVL
Subjt:  FDHSSYVDGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVTQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVL

Query:  GYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLI
        GYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLI
Subjt:  GYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLI

Query:  HLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR
        HLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR
Subjt:  HLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR

XP_038901811.1 heterogeneous nuclear ribonucleoprotein F isoform X1 [Benincasa hispida]4.2e-13392.25Show/hide
Query:  FDHSSYVDGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVTQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVL
        F   SY DGGDGREMGAKRQRIVDQGSSYYGT PGSGFMYNTSPYAYV QPPPFPVVRLRGLPFDCMETDV EFFHGLDIVDI+FVHKNGKFTGEGFCVL
Subjt:  FDHSSYVDGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVTQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVL

Query:  GYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLI
        GYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKA+ANEVFDARGGSPRR+AP  SK N+EVKD AEHTGVLRLRGLPYSAGKDDILDFFKGFNLSED I
Subjt:  GYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLI

Query:  HLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR
        HLTLNSEGRPSGEAFVEF+N QDSKAAM+KDRMTLGSRYIELFPSS EELDEAISRGR
Subjt:  HLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR

TrEMBL top hitse value%identityAlignment
A0A0A0L205 RRM domain-containing protein1.4e-13493.02Show/hide
Query:  FDHSSYVDGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVTQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVL
        F   SY DGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYV QPPPFPVVRLRGLPFDCMETDV EFFHGLDIVDI+FVHKNGKFTGEGFCVL
Subjt:  FDHSSYVDGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVTQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVL

Query:  GYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLI
        GYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKA+ANEVFDARGGSPRR+AP  SK N+EVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSED I
Subjt:  GYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLI

Query:  HLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR
        HLTLNSEGRPSGEAFVEF+N QDSKAAM+KDRMTLGSRYIELFPSS EELDEAISRGR
Subjt:  HLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR

A0A1S3BMM3 heterogeneous nuclear ribonucleoprotein F1.4e-13493.02Show/hide
Query:  FDHSSYVDGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVTQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVL
        F   SY DGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYV QPPPFPVVRLRGLPFDCMETDV EFFHGLDIVDI+FVHKNGKFTGEGFCVL
Subjt:  FDHSSYVDGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVTQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVL

Query:  GYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLI
        GYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKA+ANEVFDARGGSPRR+AP  SK N+EVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSED I
Subjt:  GYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLI

Query:  HLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR
        HLTLNSEGRPSGEAFVEF+N QDSKAAM+KDRMTLGSRYIELFPSS EELDEAISRGR
Subjt:  HLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR

A0A5A7TH86 Heterogeneous nuclear ribonucleoprotein H isoform X18.2e-13593.75Show/hide
Query:  HSSYVDGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVTQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGY
        H SY DGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYV QPPPFPVVRLRGLPFDCMETDV EFFHGLDIVDI+FVHKNGKFTGEGFCVLGY
Subjt:  HSSYVDGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVTQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGY

Query:  PLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHL
        PLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKA+ANEVFDARGGSPRR+AP  SK N+EVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSED IHL
Subjt:  PLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHL

Query:  TLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR
        TLNSEGRPSGEAFVEF+N QDSKAAM+KDRMTLGSRYIELFPSS EELDEAISRGR
Subjt:  TLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR

A0A5D3BB71 Heterogeneous nuclear ribonucleoprotein H isoform X18.2e-13593.75Show/hide
Query:  HSSYVDGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVTQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGY
        H SY DGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYV QPPPFPVVRLRGLPFDCMETDV EFFHGLDIVDI+FVHKNGKFTGEGFCVLGY
Subjt:  HSSYVDGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVTQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGY

Query:  PLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHL
        PLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKA+ANEVFDARGGSPRR+AP  SK N+EVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSED IHL
Subjt:  PLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHL

Query:  TLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR
        TLNSEGRPSGEAFVEF+N QDSKAAM+KDRMTLGSRYIELFPSS EELDEAISRGR
Subjt:  TLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR

A0A6J1D5R6 heterogeneous nuclear ribonucleoprotein F7.4e-14498.06Show/hide
Query:  FDHSSYVDGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVTQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVL
        F   SYVDGG+GREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYV+QPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVL
Subjt:  FDHSSYVDGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVTQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVL

Query:  GYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLI
        GYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLI
Subjt:  GYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLI

Query:  HLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR
        HLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR
Subjt:  HLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR

SwissProt top hitse value%identityAlignment
P52597 Heterogeneous nuclear ribonucleoprotein F4.9e-2838Show/hide
Query:  VVRLRGLPFDCMETDVAEFFHGLDIVD----IVFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRR
        VV+LRGLP+ C   DV  F     I D    + F++ + G+ +GE F  LG    V  AL+++R++MG RY+E+F+S+R E    L +            
Subjt:  VVRLRGLPFDCMETDVAEFFHGLDIVD----IVFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRR

Query:  TAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEEL
             S PN+   DSA + G +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+FA+ + ++ A+ K +  +G RYIE+F SSQEE+
Subjt:  TAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEEL

Q5E9J1 Heterogeneous nuclear ribonucleoprotein F5.5e-2737.5Show/hide
Query:  VVRLRGLPFDCMETDVAEFFHGLDIVD-IVFVH----KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRR
        VV+LRGLP+ C   DV  F     I D +  VH    + G+ +GE F  L     V  AL+++R++MG RY+E+F+S+R E    L +            
Subjt:  VVRLRGLPFDCMETDVAEFFHGLDIVD-IVFVH----KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRR

Query:  TAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEEL
             S PN+   D+A + G +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+FA+ + ++ A+ K +  +G RYIE+F SSQEE+
Subjt:  TAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEEL

Q60HC3 Heterogeneous nuclear ribonucleoprotein F4.9e-2838Show/hide
Query:  VVRLRGLPFDCMETDVAEFFHGLDIVD----IVFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRR
        VV+LRGLP+ C   DV  F     I D    + F++ + G+ +GE F  LG    V  AL+++R++MG RY+E+F+S+R E    L +            
Subjt:  VVRLRGLPFDCMETDVAEFFHGLDIVD----IVFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRR

Query:  TAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEEL
             S PN+   DSA + G +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+FA+ + ++ A+ K +  +G RYIE+F SSQEE+
Subjt:  TAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEEL

Q794E4 Heterogeneous nuclear ribonucleoprotein F4.2e-2738Show/hide
Query:  VVRLRGLPFDCMETDVAEFFHGLDIVD-IVFVH----KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRR
        VV+LRGLP+ C   DV  F     I D +  VH    + G+ +GE F  L     V  AL+++R++MG RY+E+F+S+R E    L +            
Subjt:  VVRLRGLPFDCMETDVAEFFHGLDIVD-IVFVH----KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRR

Query:  TAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEEL
             S PN+   DSA + G +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+FA+ + ++ A+ K +  +G RYIE+F SSQEE+
Subjt:  TAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEEL

Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F4.2e-2738Show/hide
Query:  VVRLRGLPFDCMETDVAEFFHGLDIVD-IVFVH----KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRR
        VV+LRGLP+ C   DV  F     I D +  VH    + G+ +GE F  L     V  AL+++R++MG RY+E+F+S+R E    L +            
Subjt:  VVRLRGLPFDCMETDVAEFFHGLDIVD-IVFVH----KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRR

Query:  TAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEEL
             S PN+   DSA + G +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+FA+ + ++ A+ K +  +G RYIE+F SSQEE+
Subjt:  TAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEEL

Arabidopsis top hitse value%identityAlignment
AT3G20890.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.2e-9961.64Show/hide
Query:  HSSYVDGGDGREMGAKRQRIVDQG--SSYYGTSPGSGFMYNTSPYAYVT--QPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFC
        +  Y DG DGREMG KRQR++DQG    +YG  P SGFMYN  PY +V    PPPFP VRLRGLPFDC E DV EFFHGLD+VD++FVH+N K TGE FC
Subjt:  HSSYVDGGDGREMGAKRQRIVDQG--SSYYGTSPGSGFMYNTSPYAYVT--QPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFC

Query:  VLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDAR--------------------------------GGSPRRTAPSWSKPNNEVKDSA
        VLGYPLQVDFALQ+NRQNMGRRYVE+FRS +QEYYKA+ANEV ++R                                GGS  R     ++ +++ K+  
Subjt:  VLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDAR--------------------------------GGSPRRTAPSWSKPNNEVKDSA

Query:  EHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR
        EHTG+LRLRGLP+SAGK+DILDFFK F LSED +H+T+N EGRP+GEAFVEF N +DS+AAM KDR TLGSRYIELFPSS EEL+EA+SRGR
Subjt:  EHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR

AT4G19610.1 nucleotide binding;nucleic acid binding;RNA binding8.7e-0425.25Show/hide
Query:  SKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGRPS-GEAFVEFANVQDSKAAMAK-DRMTLGSRYIELFPSSQEELDE
        ++ +  V D    TG L +R LPY+A ++++++ F  F    + +HL L+ E + S G A++ +   + +  AM + D  +   R + + P+   E  +
Subjt:  SKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGRPS-GEAFVEFANVQDSKAAMAK-DRMTLGSRYIELFPSSQEELDE

AT5G66010.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-5947.66Show/hide
Query:  GGDGREMGAKRQRIVDQGSSY--YGTSPGSGFMYNTSPYAYVTQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGYPLQV
        G  G E+G+KRQR++ Q + Y   GT P S       P+ Y      FPVVRLRGLPF+C + D+ EFF GL+IVD++ V KNGKF+GE F V   P+QV
Subjt:  GGDGREMGAKRQRIVDQGSSY--YGTSPGSGFMYNTSPYAYVTQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGYPLQV

Query:  DFALQRNRQNMGRRYVEIFRSNRQEYYKALANE----VFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHL
        + ALQR+R NMGRRYVE+FR ++Q+YY A+A E     ++ R  SP  T PS +K  +E K+  E+T VL++RGLPYS  K  I++FF G+ + +  + +
Subjt:  DFALQRNRQNMGRRYVEIFRSNRQEYYKALANE----VFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHL

Query:  TLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR
            +G+ +GEAFVEF   ++++ AMAKD+M++GSRY+ELFP+++EE   A +R R
Subjt:  TLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR

AT5G66010.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-3546.54Show/hide
Query:  LQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANE----VFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDL
        +QV+ ALQR+R NMGRRYVE+FR ++Q+YY A+A E     ++ R  SP  T PS +K  +E K+  E+T VL++RGLPYS  K  I++FF G+ + +  
Subjt:  LQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANE----VFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDL

Query:  IHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR
        + +    +G+ +GEAFVEF   ++++ AMAKD+M++GSRY+ELFP+++EE   A +R R
Subjt:  IHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGTTTTGACCACAGTTCATACGTTGATGGTGGCGATGGTCGTGAAATGGGTGCAAAGCGGCAACGGATAGTTGATCAGGGATCTTCTTATTACGGGACTTCTCCTGGTTC
TGGTTTTATGTATAATACAAGTCCCTATGCATACGTTACTCAGCCACCACCGTTTCCTGTTGTCAGACTTCGAGGTCTTCCTTTCGATTGCATGGAAACTGATGTTGCTG
AGTTCTTTCATGGTCTGGACATAGTTGACATTGTTTTTGTGCACAAGAATGGTAAATTCACAGGGGAAGGTTTTTGTGTTTTGGGTTACCCTCTGCAGGTTGATTTTGCC
CTTCAGAGAAATAGGCAAAACATGGGCAGGAGATATGTTGAGATTTTCAGGAGTAATCGGCAGGAATACTACAAGGCTTTAGCAAATGAAGTATTCGATGCCCGGGGTGG
TTCACCAAGAAGAACTGCACCCAGCTGGTCGAAGCCAAACAACGAGGTGAAAGACTCTGCTGAACACACGGGTGTACTACGATTGAGGGGACTGCCATATTCGGCTGGCA
AGGATGACATACTGGACTTCTTCAAAGGTTTTAACTTATCGGAGGACTTGATTCATTTAACACTGAATTCAGAGGGGAGGCCAAGTGGGGAGGCATTCGTCGAGTTCGCC
AACGTGCAAGACTCGAAAGCAGCCATGGCCAAGGACAGAATGACGCTAGGTAGTCGATACATAGAGCTGTTCCCATCATCACAGGAAGAGCTCGACGAAGCAATCTCTAG
AGGGCGG
mRNA sequenceShow/hide mRNA sequence
TGTTTTGACCACAGTTCATACGTTGATGGTGGCGATGGTCGTGAAATGGGTGCAAAGCGGCAACGGATAGTTGATCAGGGATCTTCTTATTACGGGACTTCTCCTGGTTC
TGGTTTTATGTATAATACAAGTCCCTATGCATACGTTACTCAGCCACCACCGTTTCCTGTTGTCAGACTTCGAGGTCTTCCTTTCGATTGCATGGAAACTGATGTTGCTG
AGTTCTTTCATGGTCTGGACATAGTTGACATTGTTTTTGTGCACAAGAATGGTAAATTCACAGGGGAAGGTTTTTGTGTTTTGGGTTACCCTCTGCAGGTTGATTTTGCC
CTTCAGAGAAATAGGCAAAACATGGGCAGGAGATATGTTGAGATTTTCAGGAGTAATCGGCAGGAATACTACAAGGCTTTAGCAAATGAAGTATTCGATGCCCGGGGTGG
TTCACCAAGAAGAACTGCACCCAGCTGGTCGAAGCCAAACAACGAGGTGAAAGACTCTGCTGAACACACGGGTGTACTACGATTGAGGGGACTGCCATATTCGGCTGGCA
AGGATGACATACTGGACTTCTTCAAAGGTTTTAACTTATCGGAGGACTTGATTCATTTAACACTGAATTCAGAGGGGAGGCCAAGTGGGGAGGCATTCGTCGAGTTCGCC
AACGTGCAAGACTCGAAAGCAGCCATGGCCAAGGACAGAATGACGCTAGGTAGTCGATACATAGAGCTGTTCCCATCATCACAGGAAGAGCTCGACGAAGCAATCTCTAG
AGGGCGG
Protein sequenceShow/hide protein sequence
CFDHSSYVDGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVTQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGYPLQVDFA
LQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFA
NVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR