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MS010214 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010214
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGlucose-methanol-choline (GMC) oxidoreductase family protein
Genome locationscaffold391:755585..755749
RNA-Seq ExpressionMS010214
SyntenyMS010214
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors (molecular function)
GO:0046593 - mandelonitrile lyase activity (molecular function)
GO:0050660 - flavin adenine dinucleotide binding (molecular function)
InterPro domainsIPR007867 - Glucose-methanol-choline oxidoreductase, C-terminal
IPR036188 - FAD/NAD(P)-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8541557.1 hypothetical protein F0562_022709 [Nyssa sinensis]1.3e-0774.36Show/hide
Query:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP
        YHG CLV KVVD NFR+IGID+LR+VDGS FT+S  TNP
Subjt:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP

XP_027122611.1 (R)-mandelonitrile lyase-like [Coffea arabica]9.8e-0876.92Show/hide
Query:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP
        YHG CLV KVVD NFR++GI ALRVVDGSIFT+S  TNP
Subjt:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP

XP_027168687.1 (R)-mandelonitrile lyase-like [Coffea eugenioides]9.8e-0876.92Show/hide
Query:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP
        YHG CLV KVVD NFR++GI ALRVVDGSIFT+S  TNP
Subjt:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP

XP_030478881.1 (R)-mandelonitrile lyase 1 isoform X1 [Cannabis sativa]8.3e-0771.79Show/hide
Query:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP
        YHG CLV KVVD +F++IGID+LRVVDGS FT+S  TNP
Subjt:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP

XP_030478882.1 (R)-mandelonitrile lyase 1 isoform X2 [Cannabis sativa]8.3e-0771.79Show/hide
Query:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP
        YHG CLV KVVD +F++IGID+LRVVDGS FT+S  TNP
Subjt:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP

TrEMBL top hitse value%identityAlignment
A0A068TP29 GMC_OxRdtase_N domain-containing protein4.8e-0876.92Show/hide
Query:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP
        YHG CLV KVVD NFR++GI ALRVVDGSIFT+S  TNP
Subjt:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP

A0A5J5BIC5 GMC_OxRdtase_N domain-containing protein6.2e-0874.36Show/hide
Query:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP
        YHG CLV KVVD NFR+IGID+LR+VDGS FT+S  TNP
Subjt:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP

A0A6P6X6P1 (R)-mandelonitrile lyase-like4.8e-0876.92Show/hide
Query:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP
        YHG CLV KVVD NFR++GI ALRVVDGSIFT+S  TNP
Subjt:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP

A0A7J6DV07 GMC_oxred_C domain-containing protein5.3e-0785.29Show/hide
Query:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMS
        YHG CLV KVVD NFR+IGIDALRVVDGSIFT+S
Subjt:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMS

A0A803QAP7 Uncharacterized protein4.0e-0771.79Show/hide
Query:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP
        YHG CLV KVVD +F++IGID+LRVVDGS FT+S  TNP
Subjt:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP

SwissProt top hitse value%identityAlignment
O50048 (R)-mandelonitrile lyase 23.3e-0656.41Show/hide
Query:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP
        YHG CLV +V+D +FR+ GI+ALRVVDGS F  +  ++P
Subjt:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP

P52706 (R)-mandelonitrile lyase 13.0e-0761.54Show/hide
Query:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP
        YHG CLV KV+D +FR+ GIDALRVVDGS F  +  ++P
Subjt:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP

P52707 (R)-mandelonitrile lyase 31.5e-0658.97Show/hide
Query:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP
        YHG CLV KV+D  FR+ GI+ALRVVDGS F  +  ++P
Subjt:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP

Q945K2 (R)-mandelonitrile lyase 21.1e-0658.97Show/hide
Query:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP
        YHG CLV KV+D +FR+ GI+ALRVVDGS F  +  ++P
Subjt:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP

Q9S746 Protein HOTHEAD8.6e-0758.97Show/hide
Query:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP
        YHG CLV KVV  N +++G+D LRV+DGS F  S  TNP
Subjt:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP

Arabidopsis top hitse value%identityAlignment
AT1G72970.1 Glucose-methanol-choline (GMC) oxidoreductase family protein6.1e-0858.97Show/hide
Query:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP
        YHG CLV KVV  N +++G+D LRV+DGS F  S  TNP
Subjt:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP

AT3G56060.1 Glucose-methanol-choline (GMC) oxidoreductase family protein3.3e-0955.81Show/hide
Query:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNPSYPI
        YHG C V KVVD N++++G+DALR++DGS F  S  TNP   I
Subjt:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNPSYPI

AT5G51930.1 Glucose-methanol-choline (GMC) oxidoreductase family protein5.5e-0961.54Show/hide
Query:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP
        YHG C V KVVD N++++GID LRV+DGS F  S  TNP
Subjt:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP

AT5G51950.1 Glucose-methanol-choline (GMC) oxidoreductase family protein4.2e-0961.54Show/hide
Query:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP
        YHG C V +VVD N+R++GID+LRV+DGS F  S  TNP
Subjt:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP

AT5G51950.2 Glucose-methanol-choline (GMC) oxidoreductase family protein4.2e-0961.54Show/hide
Query:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP
        YHG C V +VVD N+R++GID+LRV+DGS F  S  TNP
Subjt:  YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TACCATGGCGAATGCCTTGTGAACAAAGTAGTTGATTGTAATTTCAGGATTATTGGAATTGATGCTCTTCGAGTTGTTGATGGTTCGATATTCACCATGTCACGAGAGAC
AAATCCTTCGTATCCTATTTATTTCTTTTTTTTTTTCCGTTTCCAATTTGTTCCT
mRNA sequenceShow/hide mRNA sequence
TACCATGGCGAATGCCTTGTGAACAAAGTAGTTGATTGTAATTTCAGGATTATTGGAATTGATGCTCTTCGAGTTGTTGATGGTTCGATATTCACCATGTCACGAGAGAC
AAATCCTTCGTATCCTATTTATTTCTTTTTTTTTTTCCGTTTCCAATTTGTTCCT
Protein sequenceShow/hide protein sequence
YHGECLVNKVVDCNFRIIGIDALRVVDGSIFTMSRETNPSYPIYFFFFFRFQFVP