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MS010221 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010221
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRho GTPase-activating gacO-like protein
Genome locationscaffold391:847271..847672
RNA-Seq ExpressionMS010221
SyntenyMS010221
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035836.1 hypothetical protein SDJN02_02635, partial [Cucurbita argyrosperma subsp. argyrosperma]9.0e-4777.61Show/hide
Query:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCDGT
        MGRGRGKGKK  +TSLED T GEEEK+SSQKQ+GSAEQ   DEIKEE  G+VEAI+E AK  PGKVIE P P E GKKRKRNSS+KEK+ LV D +C GT
Subjt:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCDGT

Query:  QTSIVEVKSNGFRHNGSRRKSKPRRAAEAVVECR
        QTSIV+VKSNGFRH+GSRRKSKPRRAAEAVVECR
Subjt:  QTSIVEVKSNGFRHNGSRRKSKPRRAAEAVVECR

XP_022148746.1 uncharacterized protein LOC111017338 [Momordica charantia]2.1e-6499.25Show/hide
Query:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCDGT
        MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDL KDENCDGT
Subjt:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCDGT

Query:  QTSIVEVKSNGFRHNGSRRKSKPRRAAEAVVECR
        QTSIVEVKSNGFRHNGSRRKSKPRRAAEAVVECR
Subjt:  QTSIVEVKSNGFRHNGSRRKSKPRRAAEAVVECR

XP_022958162.1 uncharacterized protein LOC111459471 [Cucurbita moschata]9.0e-4777.61Show/hide
Query:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCDGT
        MGRGRGKGKK  +TSLED T GEEEK+SSQKQ+GSAEQ   DEIKEE  G+VEAI+E AK  PGKVIE P P E GKKRKRNSS+KEK+ LV D +C GT
Subjt:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCDGT

Query:  QTSIVEVKSNGFRHNGSRRKSKPRRAAEAVVECR
        QTSIV+VKSNGFRH+GSRRKSKPRRAAEAVVECR
Subjt:  QTSIVEVKSNGFRHNGSRRKSKPRRAAEAVVECR

XP_022995170.1 uncharacterized protein LOC111490789 [Cucurbita maxima]1.1e-4776.87Show/hide
Query:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCDGT
        MGRGRGKGKK ++ SLED TTGEE+K+SSQKQ+GSAEQP  DE+KEE FG+VEAI+E AK  PG+VIE P P E GKKRKRNSS+KEK+ LV D +C GT
Subjt:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCDGT

Query:  QTSIVEVKSNGFRHNGSRRKSKPRRAAEAVVECR
        QTSIV+VKSNGFRH+GSRRKSKPRRAAEAVVECR
Subjt:  QTSIVEVKSNGFRHNGSRRKSKPRRAAEAVVECR

XP_023532419.1 uncharacterized protein LOC111794599 [Cucurbita pepo subsp. pepo]3.4e-4676.87Show/hide
Query:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCDGT
        MGRGRGKGKK  +TSLED T GEEEK+SSQKQ+GSAEQ   DEIKEE  G+VEAI+E  K  PGKVIE P P E GKKRKRNSS+KEK+ LV D +C GT
Subjt:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCDGT

Query:  QTSIVEVKSNGFRHNGSRRKSKPRRAAEAVVECR
        QTSIV+VKSNGFRH+GSRRKSKPRRAAEAVVECR
Subjt:  QTSIVEVKSNGFRHNGSRRKSKPRRAAEAVVECR

TrEMBL top hitse value%identityAlignment
A0A6A1W7A1 Uncharacterized protein1.3e-3059.85Show/hide
Query:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVE-AINEHAKA-SPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCD
        MGRGRGKGKK +VT+ +DP +GEEEK+ +QK+ G  ++PLKDEI EE   K+E   +E+AK+ +P K  + P   E GKKRKRN  +KEK D +K+EN +
Subjt:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVE-AINEHAKA-SPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCD

Query:  GTQTSIVE-VKSNGFRHNGSRRKSKPRRAAEAVVECR
        GT++S  + +KSNGFRHNGSRRKSKPRRAAEA VECR
Subjt:  GTQTSIVE-VKSNGFRHNGSRRKSKPRRAAEAVVECR

A0A6J1D6B7 uncharacterized protein LOC1110173381.0e-6499.25Show/hide
Query:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCDGT
        MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDL KDENCDGT
Subjt:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCDGT

Query:  QTSIVEVKSNGFRHNGSRRKSKPRRAAEAVVECR
        QTSIVEVKSNGFRHNGSRRKSKPRRAAEAVVECR
Subjt:  QTSIVEVKSNGFRHNGSRRKSKPRRAAEAVVECR

A0A6J1H145 uncharacterized protein LOC1114594714.3e-4777.61Show/hide
Query:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCDGT
        MGRGRGKGKK  +TSLED T GEEEK+SSQKQ+GSAEQ   DEIKEE  G+VEAI+E AK  PGKVIE P P E GKKRKRNSS+KEK+ LV D +C GT
Subjt:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCDGT

Query:  QTSIVEVKSNGFRHNGSRRKSKPRRAAEAVVECR
        QTSIV+VKSNGFRH+GSRRKSKPRRAAEAVVECR
Subjt:  QTSIVEVKSNGFRHNGSRRKSKPRRAAEAVVECR

A0A6J1K191 uncharacterized protein LOC1114907895.1e-4876.87Show/hide
Query:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCDGT
        MGRGRGKGKK ++ SLED TTGEE+K+SSQKQ+GSAEQP  DE+KEE FG+VEAI+E AK  PG+VIE P P E GKKRKRNSS+KEK+ LV D +C GT
Subjt:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCDGT

Query:  QTSIVEVKSNGFRHNGSRRKSKPRRAAEAVVECR
        QTSIV+VKSNGFRH+GSRRKSKPRRAAEAVVECR
Subjt:  QTSIVEVKSNGFRHNGSRRKSKPRRAAEAVVECR

A0A7N2QX30 Uncharacterized protein2.2e-3060.58Show/hide
Query:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKV-EAINEHAKA-SPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCD
        MGRGRGKGKK +VT+ ED  +GEEEK+ +QK+ G  ++PLKDEI EE   K+ E  +E+AK+ +P K I+ P+  E GKKRKRNS +KEK D VK+EN +
Subjt:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKV-EAINEHAKA-SPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCD

Query:  GTQTSIVE-VKSNGFRHNGSRRKSKPRRAAEAVVECR
        GT++S  + +KSNGFR NGSRRKSKPRRAAEA VEC+
Subjt:  GTQTSIVE-VKSNGFRHNGSRRKSKPRRAAEAVVECR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G42190.1 unknown protein4.6e-1741.3Show/hide
Query:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVEAINE--HAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCD
        M RGRGKGKK + ++ ED  +G+EEK+ + ++ G  ++P+KD+ +EE     E + E    +    ++ +G    +  K+RKR  S     DL ++EN  
Subjt:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVEAINE--HAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCD

Query:  GTQTSI---VEVKSNGFRHNGSRRKSKPRRAAEAVVEC
        G++ +        S GFR NGSRRKSKPRRAAEAVVEC
Subjt:  GTQTSI---VEVKSNGFRHNGSRRKSKPRRAAEAVVEC

AT3G57930.1 unknown protein1.2e-1743.17Show/hide
Query:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEEN--FGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCD
        M RGRGKGK+ + T+ ED  +GEEEK+ + ++ G  ++P+KDE +EE     K +   +    + G V       E G+KRK+    KE  ++ ++EN  
Subjt:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEEN--FGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCD

Query:  G----TQTSIVEVKSNGFRHNGSRRKSKPRRAAEAVVEC
        G    T+ S+    S GFR NGSRRK+KPRRAAEAVVEC
Subjt:  G----TQTSIVEVKSNGFRHNGSRRKSKPRRAAEAVVEC

AT3G57930.2 unknown protein1.2e-1743.17Show/hide
Query:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEEN--FGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCD
        M RGRGKGK+ + T+ ED  +GEEEK+ + ++ G  ++P+KDE +EE     K +   +    + G V       E G+KRK+    KE  ++ ++EN  
Subjt:  MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEEN--FGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCD

Query:  G----TQTSIVEVKSNGFRHNGSRRKSKPRRAAEAVVEC
        G    T+ S+    S GFR NGSRRK+KPRRAAEAVVEC
Subjt:  G----TQTSIVEVKSNGFRHNGSRRKSKPRRAAEAVVEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGAGGAAGAGGAAAGGGGAAGAAATTCAGTGTAACCAGTCTTGAAGACCCAACAACTGGTGAGGAAGAGAAATTGTCTTCACAGAAGCAAAGTGGAAGTGCAGA
ACAGCCATTAAAAGATGAAATCAAGGAAGAAAATTTTGGAAAAGTAGAAGCCATCAATGAGCATGCTAAAGCTTCACCTGGCAAGGTGATTGAAGGTCCAACTCCACTGG
AGTGTGGGAAGAAGAGGAAAAGAAACTCTTCAATCAAAGAGAAACTGGATTTAGTTAAAGATGAAAATTGTGATGGCACCCAAACAAGCATTGTCGAAGTCAAGTCTAAT
GGATTCCGGCATAATGGAAGCAGGCGAAAAAGTAAGCCCCGTCGAGCTGCTGAAGCAGTTGTTGAGTGCAGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGAGGAAGAGGAAAGGGGAAGAAATTCAGTGTAACCAGTCTTGAAGACCCAACAACTGGTGAGGAAGAGAAATTGTCTTCACAGAAGCAAAGTGGAAGTGCAGA
ACAGCCATTAAAAGATGAAATCAAGGAAGAAAATTTTGGAAAAGTAGAAGCCATCAATGAGCATGCTAAAGCTTCACCTGGCAAGGTGATTGAAGGTCCAACTCCACTGG
AGTGTGGGAAGAAGAGGAAAAGAAACTCTTCAATCAAAGAGAAACTGGATTTAGTTAAAGATGAAAATTGTGATGGCACCCAAACAAGCATTGTCGAAGTCAAGTCTAAT
GGATTCCGGCATAATGGAAGCAGGCGAAAAAGTAAGCCCCGTCGAGCTGCTGAAGCAGTTGTTGAGTGCAGA
Protein sequenceShow/hide protein sequence
MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCDGTQTSIVEVKSN
GFRHNGSRRKSKPRRAAEAVVECR