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MS010223 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010223
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGTD-binding domain-containing protein
Genome locationscaffold391:893196..893688
RNA-Seq ExpressionMS010223
SyntenyMS010223
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0080115 - myosin XI tail binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576883.1 Myosin-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia]5.9e-4565.64Show/hide
Query:  MDIALRLNKFLKQSSE---KFLVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLYDFRDKSTNNVRTGFLFKNS-VEVCNSKTMQTWGSRRRNW
        MD + RLNK LKQSSE    FLVFGCF RVF+I GLFLLFW++ K++QFSWH GD M F  DF++KS  N+R G   K S VEVCNSKT+QT  SRR NW
Subjt:  MDIALRLNKFLKQSSE---KFLVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLYDFRDKSTNNVRTGFLFKNS-VEVCNSKTMQTWGSRRRNW

Query:  LKRNGFLFNKFNLVGNSKWPGDADGDVKSEEKDVVLEDDIQNEEKENDSEGEDAEFDVIRLRK
        LK+NGFLF+KFNLV N KW  D+DGD KSEEK  VLED ++NEE ENDS  ED EFDV +LR+
Subjt:  LKRNGFLFNKFNLVGNSKWPGDADGDVKSEEKDVVLEDDIQNEEKENDSEGEDAEFDVIRLRK

XP_022149137.1 protein FLOURY 1-like [Momordica charantia]5.0e-6083.13Show/hide
Query:  MDIALRLNKFLKQSSEKF----LVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLYDFRDKSTNNVRTGFLFKNS-VEVCNSKTMQTWGSRRRN
        MDIA RLNKFLKQSS +F    LVFGCF RVFVI GLFLLFWMALKVLQFSWHGGD MQFL DFR+KS N VRTGF  K S VEVCNSKTMQT GSRRRN
Subjt:  MDIALRLNKFLKQSSEKF----LVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLYDFRDKSTNNVRTGFLFKNS-VEVCNSKTMQTWGSRRRN

Query:  WLK-RNGFLFNKFNLVGNSKWPGDADGDVKSEEKD-VVLEDDIQNEEKENDSEGEDAEFDVIRLRK
        WLK R+GFLFNKFNLV NSKW  DADGDVKSEEKD VV+EDDIQNEEKENDS  EDAEFDVIRLRK
Subjt:  WLK-RNGFLFNKFNLVGNSKWPGDADGDVKSEEKD-VVLEDDIQNEEKENDSEGEDAEFDVIRLRK

XP_022922517.1 protein FLOURY 1-like [Cucurbita moschata]4.7e-4264.42Show/hide
Query:  MDIALRLNKFLKQSSE---KFLVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLYDFRDKSTNNVRTGFLFKNS-VEVCNSKTMQTWGSRRRNW
        MD + RLNK LKQSSE    FLVFGCF RVF+I GLFLLFW++ K++QFSWH GD M F  DF++KS  N+R G   K S VEVCNSKT+QT  SRR NW
Subjt:  MDIALRLNKFLKQSSE---KFLVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLYDFRDKSTNNVRTGFLFKNS-VEVCNSKTMQTWGSRRRNW

Query:  LKRNGFLFNKFNLVGNSKWPGDADGDVKSEEKDVVLEDDIQNEEKENDSEGEDAEFDVIRLRK
        LK+NGFLF+KFNLV N KW  D+DGD KSEEK    ED ++NEE ENDS  ED EFDV +LR+
Subjt:  LKRNGFLFNKFNLVGNSKWPGDADGDVKSEEKDVVLEDDIQNEEKENDSEGEDAEFDVIRLRK

XP_022985083.1 protein FLOURY 1-like [Cucurbita maxima]5.0e-4465.03Show/hide
Query:  MDIALRLNKFLKQSSE---KFLVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLYDFRDKSTNNVRTGFLFKNS-VEVCNSKTMQTWGSRRRNW
        MD++ RLNK LKQSSE    FLVFGCF RVF+I GLFLLFW++ K++QFSWH GD M F  DF++KS  N+R G   K S VEVCNSKT+QT  SRR NW
Subjt:  MDIALRLNKFLKQSSE---KFLVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLYDFRDKSTNNVRTGFLFKNS-VEVCNSKTMQTWGSRRRNW

Query:  LKRNGFLFNKFNLVGNSKWPGDADGDVKSEEKDVVLEDDIQNEEKENDSEGEDAEFDVIRLRK
        LK+NG LF+KFNLV N  W  D+DGDVKSEEK  VLED + NEE ENDS  ED EFDV +LR+
Subjt:  LKRNGFLFNKFNLVGNSKWPGDADGDVKSEEKDVVLEDDIQNEEKENDSEGEDAEFDVIRLRK

XP_023552476.1 protein FLOURY 1-like [Cucurbita pepo subsp. pepo]1.0e-4465.03Show/hide
Query:  MDIALRLNKFLKQSSE---KFLVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLYDFRDKSTNNVRTGFLFKNS-VEVCNSKTMQTWGSRRRNW
        MD + RLNK LKQSSE    FLVFGCF RVF+I GLFLLFW++ K++QFSWH GD M F  DF++KS  N+R G   K S VEVCNSKT+QT  SRR NW
Subjt:  MDIALRLNKFLKQSSE---KFLVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLYDFRDKSTNNVRTGFLFKNS-VEVCNSKTMQTWGSRRRNW

Query:  LKRNGFLFNKFNLVGNSKWPGDADGDVKSEEKDVVLEDDIQNEEKENDSEGEDAEFDVIRLRK
        LK+NGFLF+KFNL+ N KW  D+DGDVKSEEK  VLED + NEE E DS  ED EFDV +LR+
Subjt:  LKRNGFLFNKFNLVGNSKWPGDADGDVKSEEKDVVLEDDIQNEEKENDSEGEDAEFDVIRLRK

TrEMBL top hitse value%identityAlignment
A0A0A0KYH0 GTD-binding domain-containing protein2.0e-3863.29Show/hide
Query:  LNKFLKQSSE---KFLVFGCFLRVFVIWGLF-LLFWMALKVLQFSWHGGDLMQFLYDFRDKSTNNVRTG-FLFKNSVEVCNSKTMQTWGSRRRNWLKRNG
        ++  LKQSSE    FLVFGCF RVF+I GLF LLFW++LKV+QFSWHG DLMQ LYDFR+KS +N+R G +L  N VEVCNS       S+R +WLK+NG
Subjt:  LNKFLKQSSE---KFLVFGCFLRVFVIWGLF-LLFWMALKVLQFSWHGGDLMQFLYDFRDKSTNNVRTG-FLFKNSVEVCNSKTMQTWGSRRRNWLKRNG

Query:  FLFNKFNLVGNSKWPGDADGDVKSEEKDVVLEDDIQNEEKENDSEGEDAEFDVIRLRK
        FLF KFNLV NSKW  D++ DV+S+EK+ +LE+D+QNEEKEN S  ED EFDVI+LR+
Subjt:  FLFNKFNLVGNSKWPGDADGDVKSEEKDVVLEDDIQNEEKENDSEGEDAEFDVIRLRK

A0A1S3BY69 uncharacterized protein LOC1034948573.7e-3762.89Show/hide
Query:  LNKFLKQSSE---KFLVFGCFLRVFVIWGLF-LLFWMALKVLQFSWHGGDLMQFLYDFRDKSTNNVRTGFLFK-NSVEVCNSKTMQTWG-SRRRNWLKRN
        ++  LKQS E    FLVFGCF R+F+I GLF LLFW +LKV+QFSWHG DLMQ LYDFR KS +N+R G   K N VEVCN     T G SRR +WLK+N
Subjt:  LNKFLKQSSE---KFLVFGCFLRVFVIWGLF-LLFWMALKVLQFSWHGGDLMQFLYDFRDKSTNNVRTGFLFK-NSVEVCNSKTMQTWG-SRRRNWLKRN

Query:  GFLFNKFNLVGNSKWPGDADGDVKSEEKDVVLEDDIQNEEKENDSEGEDAEFDVIRLRK
        GFLF KFNLV  SKW  D++GDV+S+EK+ +LE+D+QNEEKEN S  ED EFDVI+LR+
Subjt:  GFLFNKFNLVGNSKWPGDADGDVKSEEKDVVLEDDIQNEEKENDSEGEDAEFDVIRLRK

A0A6J1D707 protein FLOURY 1-like2.4e-6083.13Show/hide
Query:  MDIALRLNKFLKQSSEKF----LVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLYDFRDKSTNNVRTGFLFKNS-VEVCNSKTMQTWGSRRRN
        MDIA RLNKFLKQSS +F    LVFGCF RVFVI GLFLLFWMALKVLQFSWHGGD MQFL DFR+KS N VRTGF  K S VEVCNSKTMQT GSRRRN
Subjt:  MDIALRLNKFLKQSSEKF----LVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLYDFRDKSTNNVRTGFLFKNS-VEVCNSKTMQTWGSRRRN

Query:  WLK-RNGFLFNKFNLVGNSKWPGDADGDVKSEEKD-VVLEDDIQNEEKENDSEGEDAEFDVIRLRK
        WLK R+GFLFNKFNLV NSKW  DADGDVKSEEKD VV+EDDIQNEEKENDS  EDAEFDVIRLRK
Subjt:  WLK-RNGFLFNKFNLVGNSKWPGDADGDVKSEEKD-VVLEDDIQNEEKENDSEGEDAEFDVIRLRK

A0A6J1E3H4 protein FLOURY 1-like2.3e-4264.42Show/hide
Query:  MDIALRLNKFLKQSSE---KFLVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLYDFRDKSTNNVRTGFLFKNS-VEVCNSKTMQTWGSRRRNW
        MD + RLNK LKQSSE    FLVFGCF RVF+I GLFLLFW++ K++QFSWH GD M F  DF++KS  N+R G   K S VEVCNSKT+QT  SRR NW
Subjt:  MDIALRLNKFLKQSSE---KFLVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLYDFRDKSTNNVRTGFLFKNS-VEVCNSKTMQTWGSRRRNW

Query:  LKRNGFLFNKFNLVGNSKWPGDADGDVKSEEKDVVLEDDIQNEEKENDSEGEDAEFDVIRLRK
        LK+NGFLF+KFNLV N KW  D+DGD KSEEK    ED ++NEE ENDS  ED EFDV +LR+
Subjt:  LKRNGFLFNKFNLVGNSKWPGDADGDVKSEEKDVVLEDDIQNEEKENDSEGEDAEFDVIRLRK

A0A6J1JCJ1 protein FLOURY 1-like2.4e-4465.03Show/hide
Query:  MDIALRLNKFLKQSSE---KFLVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLYDFRDKSTNNVRTGFLFKNS-VEVCNSKTMQTWGSRRRNW
        MD++ RLNK LKQSSE    FLVFGCF RVF+I GLFLLFW++ K++QFSWH GD M F  DF++KS  N+R G   K S VEVCNSKT+QT  SRR NW
Subjt:  MDIALRLNKFLKQSSE---KFLVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLYDFRDKSTNNVRTGFLFKNS-VEVCNSKTMQTWGSRRRNW

Query:  LKRNGFLFNKFNLVGNSKWPGDADGDVKSEEKDVVLEDDIQNEEKENDSEGEDAEFDVIRLRK
        LK+NG LF+KFNLV N  W  D+DGDVKSEEK  VLED + NEE ENDS  ED EFDV +LR+
Subjt:  LKRNGFLFNKFNLVGNSKWPGDADGDVKSEEKDVVLEDDIQNEEKENDSEGEDAEFDVIRLRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATCGCTTTGCGTTTGAATAAGTTTTTGAAACAGAGTAGTGAGAAGTTTTTGGTGTTCGGATGTTTTCTGCGAGTTTTTGTAATTTGGGGGCTTTTTCTGCTTTT
TTGGATGGCTTTGAAGGTTCTGCAATTCAGTTGGCATGGTGGGGATTTGATGCAATTTCTATACGATTTTAGAGATAAATCTACTAATAATGTAAGGACTGGATTTTTAT
TCAAAAACAGTGTTGAGGTGTGTAATTCAAAAACTATGCAAACTTGGGGAAGTAGACGACGGAATTGGTTGAAGAGGAATGGATTCTTGTTCAATAAATTCAATTTAGTT
GGAAACTCCAAATGGCCGGGGGATGCGGACGGTGATGTTAAGAGTGAAGAAAAGGATGTAGTTTTAGAAGATGATATCCAGAACGAAGAGAAAGAAAATGATTCTGAAGG
TGAAGATGCTGAATTTGATGTTATCAGATTAAGAAAATTT
mRNA sequenceShow/hide mRNA sequence
ATGGATATCGCTTTGCGTTTGAATAAGTTTTTGAAACAGAGTAGTGAGAAGTTTTTGGTGTTCGGATGTTTTCTGCGAGTTTTTGTAATTTGGGGGCTTTTTCTGCTTTT
TTGGATGGCTTTGAAGGTTCTGCAATTCAGTTGGCATGGTGGGGATTTGATGCAATTTCTATACGATTTTAGAGATAAATCTACTAATAATGTAAGGACTGGATTTTTAT
TCAAAAACAGTGTTGAGGTGTGTAATTCAAAAACTATGCAAACTTGGGGAAGTAGACGACGGAATTGGTTGAAGAGGAATGGATTCTTGTTCAATAAATTCAATTTAGTT
GGAAACTCCAAATGGCCGGGGGATGCGGACGGTGATGTTAAGAGTGAAGAAAAGGATGTAGTTTTAGAAGATGATATCCAGAACGAAGAGAAAGAAAATGATTCTGAAGG
TGAAGATGCTGAATTTGATGTTATCAGATTAAGAAAATTT
Protein sequenceShow/hide protein sequence
MDIALRLNKFLKQSSEKFLVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLYDFRDKSTNNVRTGFLFKNSVEVCNSKTMQTWGSRRRNWLKRNGFLFNKFNLV
GNSKWPGDADGDVKSEEKDVVLEDDIQNEEKENDSEGEDAEFDVIRLRKF